RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 TLR6Q9Y2C9 796 aa5.76□□□□□ -1.49
MALAT1-216ENST00000620465 CTSBP07858 339 aa5.75□□□□□ -1.49
MALAT1-216ENST00000620465 DIEXFQ68CQ4 756 aaKnown RBP5.75□□□□□ -1.49
MALAT1-216ENST00000620465 KIAA1211Q6ZU35 1233 aa5.75□□□□□ -1.49
MALAT1-216ENST00000620465 GRIN3AQ8TCU5 1115 aa5.75□□□□□ -1.49
MALAT1-216ENST00000620465 ACSBG1Q96GR2 724 aa5.75□□□□□ -1.49
MALAT1-216ENST00000620465 TGIF2Q9GZN2 237 aa5.75□□□□□ -1.49
MALAT1-216ENST00000620465 MIR1-1HGQ9H1L0 117 aa5.75□□□□□ -1.49
MALAT1-216ENST00000620465 CCDC86Q9H6F5 360 aaKnown RBP5.75□□□□□ -1.49
MALAT1-216ENST00000620465 CCSER2Q9H7U1 834 aa5.75□□□□□ -1.49
MALAT1-216ENST00000620465 DDX41Q9UJV9 622 aaKnown RBP5.75□□□□□ -1.49
MALAT1-216ENST00000620465 PCDHGB7Q9Y5F8 929 aa5.75□□□□□ -1.49
MALAT1-216ENST00000620465 MEGF11A6BM72 1044 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 F8W735 103 aaPredicted RBP5.74□□□□□ -1.49
MALAT1-216ENST00000620465 DLGAP3O95886 979 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 CAMK2GQ13555 558 aaPredicted RBP5.74□□□□□ -1.49
MALAT1-216ENST00000620465 SEPT6Q14141 434 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 EXOSC6Q5RKV6 272 aaKnown RBP5.74□□□□□ -1.49
MALAT1-216ENST00000620465 SNAP47Q5SQN1 464 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 CCDC84Q86UT8 332 aaPredicted RBP5.74□□□□□ -1.49
MALAT1-216ENST00000620465 TRIM42Q8IWZ5 723 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 ZNF654Q8IZM8 581 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 TMEM130Q8N3G9 435 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 GPBAR1Q8TDU6 330 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 GAL3ST3Q96A11 431 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 DCAF5Q96JK2 942 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 TMPRSS13Q9BYE2 586 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 AKTIPQ9H8T0 292 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 CACNA2D2Q9NY47 1150 aa5.74□□□□□ -1.49
MALAT1-216ENST00000620465 MINDY4BA8MYZ0 360 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 ZNF862O60290 1169 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 PF4P02776 101 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 EIF4A3P38919 411 aaKnown RBP5.73□□□□□ -1.49
MALAT1-216ENST00000620465 FAM160A1Q05DH4 1040 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 RAD51AP2Q09MP3 1159 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 MBTPS1Q14703 1052 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 KIF4BQ2VIQ3 1234 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 NUTM2GQ5VZR2 741 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 ANKRD34AQ69YU3 496 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 FDX2Q6P4F2 183 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 KIAA0825Q8IV33 1275 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 AGGF1Q8N302 714 aaeCLIP5.73□□□□□ -1.49
MALAT1-216ENST00000620465 SUGCTQ9HAC7 445 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 CYP4F12Q9HCS2 524 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 KCNQ5Q9NR82 932 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 RAD18Q9NS91 495 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.73□□□□□ -1.49
MALAT1-216ENST00000620465 SUPT16HQ9Y5B9 1047 aaKnown RBP5.73□□□□□ -1.49
MALAT1-216ENST00000620465 PCDHB5Q9Y5E4 795 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 SYNGAP1Q96PV0 1343 aa5.73□□□□□ -1.49
MALAT1-216ENST00000620465 KRBA1A5PL33 1030 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 AOC2O75106 756 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 LIG1P18858 919 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 RACK1P63244 317 aaKnown RBP5.72□□□□□ -1.49
MALAT1-216ENST00000620465 KCNMA1Q12791 1236 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 ADGRE1Q14246 886 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 MPRIPQ6WCQ1 1025 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 Q6ZS46 218 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 TXNRD3Q86VQ6 643 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 GOLM1Q8NBJ4 401 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 SMG8Q8ND04 991 aaKnown RBP5.72□□□□□ -1.49
MALAT1-216ENST00000620465 SPON2Q9BUD6 331 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 WDR18Q9BV38 432 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 CEP41Q9BYV8 373 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 ADAMTS1Q9UHI8 967 aa5.72□□□□□ -1.49
MALAT1-216ENST00000620465 SLFN14P0C7P3 912 aa5.71□□□□□ -1.5
MALAT1-216ENST00000620465 ADH5P11766 374 aa5.71□□□□□ -1.5
MALAT1-216ENST00000620465 GLB1P16278 677 aa5.71□□□□□ -1.5
MALAT1-216ENST00000620465 GARTP22102 1010 aa5.71□□□□□ -1.5
MALAT1-216ENST00000620465 NOS3P29474 1203 aa5.71□□□□□ -1.5
MALAT1-216ENST00000620465 IREB2P48200 963 aaKnown RBP5.71□□□□□ -1.5
MALAT1-216ENST00000620465 RASSF7Q02833 373 aa5.71□□□□□ -1.5
MALAT1-216ENST00000620465 AKAP4Q5JQC9 854 aa5.71□□□□□ -1.5
MALAT1-216ENST00000620465 BNC2Q6ZN30 1099 aaPredicted RBP5.71□□□□□ -1.5
MALAT1-216ENST00000620465 ZNF296Q8WUU4 475 aaPredicted RBP5.71□□□□□ -1.5
MALAT1-216ENST00000620465 WFDC12Q8WWY7 111 aa5.71□□□□□ -1.5
MALAT1-216ENST00000620465 WDR89Q96FK6 387 aaPredicted RBP5.71□□□□□ -1.5
MALAT1-216ENST00000620465 PCDHA4Q9UN74 947 aa5.71□□□□□ -1.5
MALAT1-216ENST00000620465 AP4E1Q9UPM8 1137 aa5.71□□□□□ -1.5
MALAT1-216ENST00000620465 ALX3O95076 343 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 TIAF1O95411 115 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 BPNT1O95861 308 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 F13A1P00488 732 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 CHRNA4P43681 627 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 ZC3H6P61129 1189 aaKnown RBP5.7□□□□□ -1.5
MALAT1-216ENST00000620465 ID3Q02535 119 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 PTPN11Q06124 597 aaPredicted RBP5.7□□□□□ -1.5
MALAT1-216ENST00000620465 FBXL19Q6PCT2 694 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 FAM196AQ6ZSG2 479 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 CD163Q86VB7 1156 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 GATAD2BQ8WXI9 593 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 JARID2Q92833 1246 aaPredicted RBP5.7□□□□□ -1.5
MALAT1-216ENST00000620465 PCDHGC5Q9Y5F6 944 aa5.7□□□□□ -1.5
MALAT1-216ENST00000620465 FAM221AA4D161 298 aa5.69□□□□□ -1.5
MALAT1-216ENST00000620465 C1QTNF9BB2RNN3 333 aa5.69□□□□□ -1.5
MALAT1-216ENST00000620465 TMPRSS2O15393 492 aa5.69□□□□□ -1.5
MALAT1-216ENST00000620465 SART1O43290 800 aaKnown RBP5.69□□□□□ -1.5
MALAT1-216ENST00000620465 GREM1O60565 184 aa5.69□□□□□ -1.5
MALAT1-216ENST00000620465 GSK3AP49840 483 aa5.69□□□□□ -1.5
MALAT1-216ENST00000620465 RPL6Q02878 288 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms