RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 KIF22Q14807 665 aa27.49■■□□□ 1.99
SRRT-218ENST00000620394 LRRFIP2Q9Y608 721 aaKnown RBP27.49■■□□□ 1.99
SRRT-218ENST00000620394 TLR2O60603 784 aa27.48■■□□□ 1.99
SRRT-218ENST00000620394 FRAT2O75474 233 aaPredicted RBP27.48■■□□□ 1.99
SRRT-218ENST00000620394 GNRH1P01148 92 aa27.48■■□□□ 1.99
SRRT-218ENST00000620394 SLC5A1P13866 664 aa27.48■■□□□ 1.99
SRRT-218ENST00000620394 MEIS3Q99687 375 aa27.48■■□□□ 1.99
SRRT-218ENST00000620394 SNCAIPQ9Y6H5 919 aa27.48■■□□□ 1.99
SRRT-218ENST00000620394 RPAP1Q9BWH6 1393 aaPredicted RBP27.48■■□□□ 1.99
SRRT-218ENST00000620394 LACTBP83111 547 aaPredicted RBP27.47■■□□□ 1.99
SRRT-218ENST00000620394 ERO1BQ86YB8 467 aa27.47■■□□□ 1.99
SRRT-218ENST00000620394 HOOK2Q96ED9 719 aa27.47■■□□□ 1.99
SRRT-218ENST00000620394 MRIQ9BWK5 157 aa27.47■■□□□ 1.99
SRRT-218ENST00000620394 TMOD2Q9NZR1 351 aa27.47■■□□□ 1.99
SRRT-218ENST00000620394 MAST3O60307 1309 aa27.46■■□□□ 1.99
SRRT-218ENST00000620394 TEKT1Q969V4 418 aa27.46■■□□□ 1.99
SRRT-218ENST00000620394 WRNIP1Q96S55 665 aa27.46■■□□□ 1.99
SRRT-218ENST00000620394 COLQQ9Y215 455 aaPredicted RBP27.46■■□□□ 1.99
SRRT-218ENST00000620394 PRMT2P55345 433 aa27.45■■□□□ 1.98
SRRT-218ENST00000620394 SNAPC2Q13487 334 aa27.45■■□□□ 1.98
SRRT-218ENST00000620394 ZDHHC15Q96MV8 337 aa27.45■■□□□ 1.98
SRRT-218ENST00000620394 COPRSQ9NQ92 184 aa27.45■■□□□ 1.98
SRRT-218ENST00000620394 ZBTB22O15209 634 aa27.44■■□□□ 1.98
SRRT-218ENST00000620394 PPIL2Q13356 520 aa27.44■■□□□ 1.98
SRRT-218ENST00000620394 FAM83AQ86UY5 434 aa27.44■■□□□ 1.98
SRRT-218ENST00000620394 SH3TC2Q8TF17 1288 aa27.44■■□□□ 1.98
SRRT-218ENST00000620394 ARHGAP39Q9C0H5 1083 aa27.44■■□□□ 1.98
SRRT-218ENST00000620394 SIL1Q9H173 461 aa27.44■■□□□ 1.98
SRRT-218ENST00000620394 BTBD19C9JJ37 291 aa27.43■■□□□ 1.98
SRRT-218ENST00000620394 IL15P40933 162 aaPredicted RBP27.43■■□□□ 1.98
SRRT-218ENST00000620394 ATP2B3Q16720 1220 aa27.43■■□□□ 1.98
SRRT-218ENST00000620394 IRF6O14896 467 aa27.42■■□□□ 1.98
SRRT-218ENST00000620394 MYCP01106 439 aaPredicted RBP27.42■■□□□ 1.98
SRRT-218ENST00000620394 CACNB3P54284 484 aa27.42■■□□□ 1.98
SRRT-218ENST00000620394 MTX1Q13505 466 aa27.42■■□□□ 1.98
SRRT-218ENST00000620394 FKBP1CQ5VVH2 108 aa27.42■■□□□ 1.98
SRRT-218ENST00000620394 DCAF15Q66K64 600 aa27.42■■□□□ 1.98
SRRT-218ENST00000620394 WDR66Q8TBY9 1149 aa27.42■■□□□ 1.98
SRRT-218ENST00000620394 CEP126Q9P2H0 1117 aa27.42■■□□□ 1.98
SRRT-218ENST00000620394 GNAI3P08754 354 aa27.41■■□□□ 1.98
SRRT-218ENST00000620394 TRIM27P14373 513 aa27.41■■□□□ 1.98
SRRT-218ENST00000620394 APOBEC3HQ6NTF7 200 aaKnown RBP27.41■■□□□ 1.98
SRRT-218ENST00000620394 HHIPL2Q6UWX4 724 aa27.41■■□□□ 1.98
SRRT-218ENST00000620394 PA2G4Q9UQ80 394 aaKnown RBP27.41■■□□□ 1.98
SRRT-218ENST00000620394 ZKSCAN4Q969J2 545 aaPredicted RBP27.4■■□□□ 1.98
SRRT-218ENST00000620394 H0YGN5 161 aa27.39■■□□□ 1.98
SRRT-218ENST00000620394 SALL1Q9NSC2 1324 aa27.39■■□□□ 1.97
SRRT-218ENST00000620394 IPO8O15397 1037 aaKnown RBP27.38■■□□□ 1.97
SRRT-218ENST00000620394 PPATQ06203 517 aa27.38■■□□□ 1.97
SRRT-218ENST00000620394 ATF7IPQ6VMQ6 1270 aa27.38■■□□□ 1.97
SRRT-218ENST00000620394 CEP290O15078 2479 aa27.38■■□□□ 1.97
SRRT-218ENST00000620394 SEMA3EO15041 775 aa27.37■■□□□ 1.97
SRRT-218ENST00000620394 ZNF341Q9BYN7 854 aa27.37■■□□□ 1.97
SRRT-218ENST00000620394 TRIOBPQ9H2D6 2365 aa27.36■■□□□ 1.97
SRRT-218ENST00000620394 C17orf99Q6UX52 265 aa27.36■■□□□ 1.97
SRRT-218ENST00000620394 SHISA4Q96DD7 197 aa27.36■■□□□ 1.97
SRRT-218ENST00000620394 GNL3LQ9NVN8 582 aaKnown RBP27.36■■□□□ 1.97
SRRT-218ENST00000620394 BCAR3O75815 825 aa27.35■■□□□ 1.97
SRRT-218ENST00000620394 PHKA1P46020 1223 aa27.35■■□□□ 1.97
SRRT-218ENST00000620394 ANKRD23Q86SG2 305 aa27.35■■□□□ 1.97
SRRT-218ENST00000620394 NKX2-3Q8TAU0 364 aa27.35■■□□□ 1.97
SRRT-218ENST00000620394 SRRDQ9UH36 339 aa27.35■■□□□ 1.97
SRRT-218ENST00000620394 MYH2Q9UKX2 1941 aa27.34■■□□□ 1.97
SRRT-218ENST00000620394 SRGAP3O43295 1099 aa27.34■■□□□ 1.97
SRRT-218ENST00000620394 HOXD10P28358 340 aa27.34■■□□□ 1.97
SRRT-218ENST00000620394 PRDX5P30044 214 aa27.34■■□□□ 1.97
SRRT-218ENST00000620394 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.34■■□□□ 1.97
SRRT-218ENST00000620394 DENND2AQ9ULE3 1009 aa27.34■■□□□ 1.97
SRRT-218ENST00000620394 TNNQ9UQP3 1299 aa27.34■■□□□ 1.97
SRRT-218ENST00000620394 DAGLAQ9Y4D2 1042 aa27.34■■□□□ 1.97
SRRT-218ENST00000620394 PDS5AQ29RF7 1337 aaKnown RBP27.34■■□□□ 1.97
SRRT-218ENST00000620394 ADGRA2Q96PE1 1338 aa27.34■■□□□ 1.97
SRRT-218ENST00000620394 MGAMO43451 1857 aa27.34■■□□□ 1.97
SRRT-218ENST00000620394 AK9Q5TCS8 1911 aa27.33■■□□□ 1.97
SRRT-218ENST00000620394 CPA4Q9UI42 421 aa27.33■■□□□ 1.97
SRRT-218ENST00000620394 DOCK2Q92608 1830 aa27.32■■□□□ 1.96
SRRT-218ENST00000620394 ADORA1P30542 326 aa27.32■■□□□ 1.96
SRRT-218ENST00000620394 PSMC4P43686 418 aa27.32■■□□□ 1.96
SRRT-218ENST00000620394 MTFR1Q15390 333 aa27.32■■□□□ 1.96
SRRT-218ENST00000620394 CCDC102BQ68D86 513 aa27.32■■□□□ 1.96
SRRT-218ENST00000620394 CHRDL2Q6WN34 429 aa27.32■■□□□ 1.96
SRRT-218ENST00000620394 MIER1Q8N108 512 aa27.32■■□□□ 1.96
SRRT-218ENST00000620394 TRIM47Q96LD4 638 aa27.32■■□□□ 1.96
SRRT-218ENST00000620394 KCNH4Q9UQ05 1017 aa27.32■■□□□ 1.96
SRRT-218ENST00000620394 PDHXO00330 501 aa27.31■■□□□ 1.96
SRRT-218ENST00000620394 CTGFP29279 349 aa27.31■■□□□ 1.96
SRRT-218ENST00000620394 INPP5BP32019 993 aa27.31■■□□□ 1.96
SRRT-218ENST00000620394 GRK4P32298 578 aa27.31■■□□□ 1.96
SRRT-218ENST00000620394 DIXDC1Q155Q3 683 aa27.31■■□□□ 1.96
SRRT-218ENST00000620394 RAET1EQ8TD07 263 aa27.31■■□□□ 1.96
SRRT-218ENST00000620394 MYPNQ86TC9 1320 aa27.31■■□□□ 1.96
SRRT-218ENST00000620394 LDHBP07195 334 aaKnown RBP27.3■■□□□ 1.96
SRRT-218ENST00000620394 OSBPP22059 807 aa27.3■■□□□ 1.96
SRRT-218ENST00000620394 MIGA2Q7L4E1 593 aa27.3■■□□□ 1.96
SRRT-218ENST00000620394 FAM151AQ8WW52 585 aa27.3■■□□□ 1.96
SRRT-218ENST00000620394 FRAT1Q92837 279 aaPredicted RBP27.3■■□□□ 1.96
SRRT-218ENST00000620394 ECM2O94769 699 aaPredicted RBP27.29■■□□□ 1.96
SRRT-218ENST00000620394 GNAI2P04899 355 aa27.29■■□□□ 1.96
SRRT-218ENST00000620394 HNRNPUQ00839 825 aaKnown RBP eCLIP27.29■■□□□ 1.96
SRRT-218ENST00000620394 RASGRF1Q13972 1273 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms