RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 PRIMPOLQ96LW4 560 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 FMNL2Q96PY5 1086 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 MTRQ99707 1265 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 HINFPQ9BQA5 517 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 VPS33BQ9H267 617 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 CXXC1Q9P0U4 656 aaPredicted RBP9.76□□□□□ -0.85
SENP3-210ENST00000619785 CDV3Q9UKY7 258 aaKnown RBP9.76□□□□□ -0.85
SENP3-210ENST00000619785 ABT1Q9ULW3 272 aaKnown RBP9.76□□□□□ -0.85
SENP3-210ENST00000619785 PCDHB11Q9Y5F2 797 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 SFI1A8K8P3 1242 aa9.75□□□□□ -0.85
SENP3-210ENST00000619785 A1BGP04217 495 aa9.75□□□□□ -0.85
SENP3-210ENST00000619785 SCNN1AP37088 669 aa9.75□□□□□ -0.85
SENP3-210ENST00000619785 ZNF511Q8NB15 262 aa9.75□□□□□ -0.85
SENP3-210ENST00000619785 FOXJ1Q92949 421 aa9.75□□□□□ -0.85
SENP3-210ENST00000619785 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
SENP3-210ENST00000619785 OLFM4Q6UX06 510 aa9.74□□□□□ -0.85
SENP3-210ENST00000619785 TPTE2Q6XPS3 522 aa9.74□□□□□ -0.85
SENP3-210ENST00000619785 NBPF5PQ86XG9 351 aaPredicted RBP9.74□□□□□ -0.85
SENP3-210ENST00000619785 KCTD12Q96CX2 325 aaKnown RBP9.74□□□□□ -0.85
SENP3-210ENST00000619785 BCL2L13Q9BXK5 485 aa9.74□□□□□ -0.85
SENP3-210ENST00000619785 SAGE1Q9NXZ1 904 aa9.74□□□□□ -0.85
SENP3-210ENST00000619785 EGFL7Q9UHF1 273 aa9.74□□□□□ -0.85
SENP3-210ENST00000619785 ZNF652Q9Y2D9 606 aa9.74□□□□□ -0.85
SENP3-210ENST00000619785 TAF1P21675 1872 aa9.74□□□□□ -0.85
SENP3-210ENST00000619785 ABCC12Q96J65 1359 aa9.74□□□□□ -0.85
SENP3-210ENST00000619785 DUOX1Q9NRD9 1551 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 UNCXA6NJT0 531 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 GNAT3A8MTJ3 354 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 H3BRB1 525 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 DKK1O94907 266 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 EPS15P42566 896 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 FMR1Q06787 632 aaKnown RBP eCLIP9.73□□□□□ -0.85
SENP3-210ENST00000619785 GLYCTKQ8IVS8 523 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 GAS2L2Q8NHY3 880 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 JDP2Q8WYK2 163 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
SENP3-210ENST00000619785 IL21Q9HBE4 155 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 GPRC5DQ9NZD1 345 aa9.73□□□□□ -0.85
SENP3-210ENST00000619785 AOC2O75106 756 aa9.72□□□□□ -0.85
SENP3-210ENST00000619785 MYCP01106 439 aaPredicted RBP9.72□□□□□ -0.85
SENP3-210ENST00000619785 HMOX1P09601 288 aa9.72□□□□□ -0.85
SENP3-210ENST00000619785 EIF6P56537 245 aaKnown RBP9.72□□□□□ -0.85
SENP3-210ENST00000619785 NBPF10Q6P3W6 841 aaKnown RBP9.72□□□□□ -0.85
SENP3-210ENST00000619785 TAS1R3Q7RTX0 852 aa9.72□□□□□ -0.85
SENP3-210ENST00000619785 NBPF15Q8N660 670 aa9.72□□□□□ -0.85
SENP3-210ENST00000619785 RTFDC1Q9BY42 306 aaPredicted RBP9.72□□□□□ -0.85
SENP3-210ENST00000619785 ADARB2Q9NS39 739 aaKnown RBP9.72□□□□□ -0.85
SENP3-210ENST00000619785 PCDHGA11Q9Y5H2 935 aa9.72□□□□□ -0.85
SENP3-210ENST00000619785 USP16Q9Y5T5 823 aa9.72□□□□□ -0.85
SENP3-210ENST00000619785 CLSPNQ9HAW4 1339 aa9.72□□□□□ -0.85
SENP3-210ENST00000619785 TRAF5O00463 557 aa9.71□□□□□ -0.86
SENP3-210ENST00000619785 TEFQ10587 303 aa9.71□□□□□ -0.86
SENP3-210ENST00000619785 NOGQ13253 232 aa9.71□□□□□ -0.86
SENP3-210ENST00000619785 OCLNQ16625 522 aa9.71□□□□□ -0.86
SENP3-210ENST00000619785 CRAMP1Q96RY5 1269 aa9.71□□□□□ -0.86
SENP3-210ENST00000619785 FCF1Q9Y324 198 aaKnown RBP9.71□□□□□ -0.86
SENP3-210ENST00000619785 FAM155AB1AL88 458 aaPredicted RBP9.7□□□□□ -0.86
SENP3-210ENST00000619785 ERVV-1B6SEH8 477 aa9.7□□□□□ -0.86
SENP3-210ENST00000619785 DIAPH1O60610 1272 aaKnown RBP9.7□□□□□ -0.86
SENP3-210ENST00000619785 RAB15P59190 212 aa9.7□□□□□ -0.86
SENP3-210ENST00000619785 ZNF211Q13398 564 aaPredicted RBP9.7□□□□□ -0.86
SENP3-210ENST00000619785 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
SENP3-210ENST00000619785 MRRFQ96E11 262 aaKnown RBP9.7□□□□□ -0.86
SENP3-210ENST00000619785 ANO2Q9NQ90 1003 aa9.7□□□□□ -0.86
SENP3-210ENST00000619785 NIP7Q9Y221 180 aaKnown RBP eCLIP9.7□□□□□ -0.86
SENP3-210ENST00000619785 ZNF609O15014 1411 aa9.7□□□□□ -0.86
SENP3-210ENST00000619785 ZNF646O15015 1829 aaPredicted RBP9.7□□□□□ -0.86
SENP3-210ENST00000619785 SCN9AQ15858 1988 aa9.7□□□□□ -0.86
SENP3-210ENST00000619785 ANKRD33BA6NCL7 494 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 ESPNB1AK53 854 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 KCNQ3O43525 872 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 ICMTO60725 284 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 LGR5O75473 907 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 SNRPA1P09661 255 aaKnown RBP9.69□□□□□ -0.86
SENP3-210ENST00000619785 DGKZQ13574 1117 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 GIPC2Q8TF65 315 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 ZNF516Q92618 1163 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 MKNK1Q9BUB5 465 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 NYXQ9GZU5 481 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 KNSTRNQ9Y448 316 aa9.69□□□□□ -0.86
SENP3-210ENST00000619785 BTBD11A6QL63 1104 aa9.68□□□□□ -0.86
SENP3-210ENST00000619785 CELF2O95319 508 aaKnown RBP9.68□□□□□ -0.86
SENP3-210ENST00000619785 S1PR4O95977 384 aa9.68□□□□□ -0.86
SENP3-210ENST00000619785 ZNF16P17020 682 aaPredicted RBP9.68□□□□□ -0.86
SENP3-210ENST00000619785 HIRAP54198 1017 aaPredicted RBP9.68□□□□□ -0.86
SENP3-210ENST00000619785 HLFQ16534 295 aa9.68□□□□□ -0.86
SENP3-210ENST00000619785 CIAPIN1Q6FI81 312 aa9.68□□□□□ -0.86
SENP3-210ENST00000619785 TRMT44Q8IYL2 757 aaKnown RBP9.68□□□□□ -0.86
SENP3-210ENST00000619785 C1QTNF2Q9BXJ5 285 aa9.68□□□□□ -0.86
SENP3-210ENST00000619785 PRAMEF22A3QJZ6 481 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 NPHP1O15259 732 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 ZBTB24O43167 697 aaPredicted RBP9.67□□□□□ -0.86
SENP3-210ENST00000619785 MAPK1P28482 360 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 PTPN5P54829 565 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 CXCL9Q07325 125 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 CDC37L1Q7L3B6 337 aa9.67□□□□□ -0.86
SENP3-210ENST00000619785 TSEN2Q8NCE0 465 aaKnown RBP9.67□□□□□ -0.86
SENP3-210ENST00000619785 GTF3C2Q8WUA4 911 aaPredicted RBP9.67□□□□□ -0.86
SENP3-210ENST00000619785 ZIC5Q96T25 663 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms