RNA–Protein interactions for RNA: ENST00000619533.1

CNTNAP4-208, Transcript of contactin associated protein like 4, human

Gene CNTNAP4, Length 1,856 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP4-208	ENST00000619533	SMC4	Q9NTJ3	1288 aa		7.54	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	TMOD2	Q9NZR1	351 aa		7.54	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	SSC5D	A1L4H1	1573 aa		7.54	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	SLC5A1	P13866	664 aa		7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	BCAM	P50895	628 aa		7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	HDLBP	Q00341	1268 aa	Known RBP	7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	PUM3	Q15397	648 aa	Known RBP	7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	FBXO46	Q6PJ61	603 aa	Predicted RBP	7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	KLHDC4	Q8TBB5	520 aa		7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	TEKT1	Q969V4	418 aa		7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	USP44	Q9H0E7	712 aa		7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	R3HDML	Q9H3Y0	253 aa		7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	ELP3	Q9H9T3	547 aa		7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	EYA2	O00167	538 aa		7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	HDAC5	Q9UQL6	1122 aa		7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	FARP1	Q9Y4F1	1045 aa	Predicted RBP	7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	ECM29	Q5VYK3	1845 aa		7.53	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	MAST3	O60307	1309 aa		7.52	□□□□□ -1.2
CNTNAP4-208	ENST00000619533	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	UBTFL1	P0CB47	393 aa	Predicted RBP	7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	MAP3K9	P80192	1104 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	GRIK5	Q16478	980 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	HS6ST3	Q8IZP7	471 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	FAM177A1	Q8N128	213 aa	Predicted RBP	7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	VGLL2	Q8N8G2	317 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	LPIN2	Q92539	896 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	OPTN	Q96CV9	577 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	HOOK2	Q96ED9	719 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CDCA7L	Q96GN5	454 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ERO1A	Q96HE7	468 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	API5	Q9BZZ5	524 aa	Known RBP	7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	TMEM39B	Q9GZU3	492 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CSAD	Q9Y600	493 aa		7.52	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	FGFR2	P21802	821 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	GJA5	P36382	358 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	RFX5	P48382	616 aa	Predicted RBP	7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	WDR66	Q8TBY9	1149 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	TEPSIN	Q96N21	525 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	MRI	Q9BWK5	157 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	GNL3L	Q9NVN8	582 aa	Known RBP	7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CEP126	Q9P2H0	1117 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	NOB1	Q9ULX3	412 aa	Known RBP	7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	SUGT1	Q9Y2Z0	365 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	TRIM17	Q9Y577	477 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	KIF16B	Q96L93	1317 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	WDHD1	O75717	1129 aa	Predicted RBP	7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CT47B1	P0C2W7	299 aa	Predicted RBP	7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	GTF2A2	P52657	109 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CACNB3	P54284	484 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	HHIPL2	Q6UWX4	724 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	IL27	Q8NEV9	243 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ZDHHC15	Q96MV8	337 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	SIL1	Q9H173	461 aa		7.51	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CCL15-CCL14	A0A0B4J2E2	113 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	TESPA1	A2RU30	521 aa	Predicted RBP	7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CIAO1	O76071	339 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CRHR2	Q13324	411 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	VGLL4	Q14135	290 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ARHGEF6	Q15052	776 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CCL15	Q16663	113 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ATP2B3	Q16720	1220 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	FKBP1C	Q5VVH2	108 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	DCAF15	Q66K64	600 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ATG9A	Q7Z3C6	839 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	FAM83A	Q86UY5	434 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	TRMT2A	Q8IZ69	625 aa	Known RBP	7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CD99L2	Q8TCZ2	262 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	GZF1	Q9H116	711 aa	Predicted RBP	7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ZFYVE28	Q9HCC9	887 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ARAP2	Q8WZ64	1704 aa		7.5	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	GTPBP6	O43824	516 aa	Predicted RBP	7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	SP3	Q02447	781 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	TAF1C	Q15572	869 aa	Predicted RBP	7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	APOBEC3H	Q6NTF7	200 aa	Known RBP	7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	OTOP1	Q7RTM1	612 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ZNF579	Q8NAF0	562 aa	Known RBP	7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	PTPN18	Q99952	460 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ZNF341	Q9BYN7	854 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	EFCC1	Q9HA90	598 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	LRRFIP2	Q9Y608	721 aa	Known RBP	7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	LDHB	P07195	334 aa	Known RBP	7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CETP	P11597	493 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	IL15	P40933	162 aa	Predicted RBP	7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ERO1B	Q86YB8	467 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	BRI3BP	Q8WY22	251 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	MS4A4A	Q96JQ5	239 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	WRNIP1	Q96S55	665 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	PTPN22	Q9Y2R2	807 aa		7.49	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	SPDYE5	A6NIY4	337 aa		7.48	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	CCER2	I3L3R5	266 aa		7.48	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	SEMA3E	O15041	775 aa		7.48	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	SNAPC2	Q13487	334 aa		7.48	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	INTS3	Q68E01	1043 aa	Known RBP	7.48	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	FAM151A	Q8WW52	585 aa		7.48	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	ZKSCAN4	Q969J2	545 aa	Predicted RBP	7.48	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	USP40	Q9NVE5	1235 aa		7.48	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	DENND2A	Q9ULE3	1009 aa		7.48	□□□□□ -1.21
CNTNAP4-208	ENST00000619533	PA2G4	Q9UQ80	394 aa	Known RBP	7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms