RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	KAT6B	Q8WYB5	2073 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	GTPBP10	A4D1E9	387 aa	Known RBP	4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TCEA3	O75764	348 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	VCAM1	P19320	739 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	GPSM2	P81274	684 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PREPL	Q4J6C6	727 aa	Predicted RBP	4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	COBLL1	Q53SF7	1204 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	CCDC158	Q5M9N0	1113 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	HELQ	Q8TDG4	1101 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PXYLP1	Q8TE99	480 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	HDAC7	Q8WUI4	952 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PAWR	Q96IZ0	340 aa	Known RBP	4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	IER2	Q9BTL4	223 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	GPCPD1	Q9NPB8	672 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	N6AMT1	Q9Y5N5	214 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	USP54	Q70EL1	1684 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	BRD4	O60885	1362 aa	Predicted RBP	4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	DYTN	A2CJ06	578 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TNFRSF10B	O14763	440 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	MME	P08473	750 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	IMPDH2	P12268	514 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TRAPPC10	P48553	1259 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	AGAP9	Q5VTM2	703 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ARMC3	Q5W041	872 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	NCAPG2	Q86XI2	1143 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	NELL1	Q92832	810 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	DNAJC25	Q9H1X3	360 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ZMAT5	Q9UDW3	170 aa	Known RBP	4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ITM2B	Q9Y287	266 aa		4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	MRPL42	Q9Y6G3	142 aa	Known RBP	4.8	□□□□□ -1.64
UBE2D3-233	ENST00000618836	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	NUTM2E	B1AL46	878 aa	Predicted RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	RIPK4	P57078	832 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TAGLN	Q01995	201 aa	Known RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PARP10	Q53GL7	1025 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ODR4	Q5SWX8	454 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	SYCP2L	Q5T4T6	812 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	NUTM2D	Q5VT03	806 aa	Predicted RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	C16orf54	Q6UWD8	224 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TEX19	Q8NA77	164 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	CABLES1	Q8TDN4	633 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	SLC26A8	Q96RN1	970 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	NOL10	Q9BSC4	688 aa	Known RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PPP2R3B	Q9Y5P8	575 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ADGRG1	Q9Y653	693 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ZFYVE9	O95405	1425 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ADGRL2	O95490	1459 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	MSL3P1	P0C860	447 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	SMARCA1	P28370	1054 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PPP2R5B	Q15173	497 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PLBD1	Q6P4A8	553 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	RAVER1	Q8IY67	606 aa	Known RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ATRIP	Q8WXE1	791 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ZBTB9	Q96C00	473 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	FRMD6	Q96NE9	622 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	MPHOSPH6	Q99547	160 aa	Known RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ZSWIM4	Q9H7M6	989 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TSKS	Q9UJT2	592 aa		4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	SMG6	Q86US8	1419 aa	Known RBP	4.79	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ORC4	O43929	436 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	CAND2	O75155	1236 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	E2F6	O75461	281 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	RFC5	P40937	340 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	FAM160A1	Q05DH4	1040 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	SH3D19	Q5HYK7	790 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PHLDB3	Q6NSJ2	640 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TAX1BP1	Q86VP1	789 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	RBM12B	Q8IXT5	1001 aa	Known RBP	4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	UHMK1	Q8TAS1	419 aa	Known RBP	4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PTCD2	Q8WV60	388 aa	Known RBP	4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TSC1	Q92574	1164 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	KCNN1	Q92952	543 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	RMDN2	Q96LZ7	410 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	VEZT	Q9HBM0	779 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ARNT2	Q9HBZ2	717 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	SQOR	Q9Y6N5	450 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	MOXD2P	A6NHM9	499 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	KIN	O60870	393 aa	Known RBP	4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	DNAJC6	O75061	913 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	COX10	Q12887	443 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	IPO9	Q96P70	1041 aa	Known RBP	4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	GSDMA	Q96QA5	445 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TRMT1	Q9NXH9	659 aa	Known RBP	4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ETAA1	Q9NY74	926 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	KIF3B	O15066	747 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	IL4R	P24394	825 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	GTF2A1	P52655	376 aa	Predicted RBP	4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	CTAG1A	P78358	180 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PDIA5	Q14554	519 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PROX2	Q3B8N5	592 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	CCDC178	Q5BJE1	867 aa		4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	METTL16	Q86W50	562 aa	Known RBP	4.78	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TNPO1	Q92973	898 aa	Known RBP	4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms