RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 KRT2P35908 639 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 KRT23Q9C075 422 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 MAPK8IP1Q9UQF2 711 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 A6NNZ2 444 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 SNCBQ16143 134 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 TUBB8Q3ZCM7 444 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 SECISBP2LQ93073 1101 aaKnown RBP16.18■□□□□ 0.18
PTPN9-206ENST00000618819 C6orf229H3BNL8 230 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 RXRAP19793 462 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 NXNQ6DKJ4 435 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 RASSF2P50749 326 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 PPFIA1Q13136 1202 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 KRT79Q5XKE5 535 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 SLC4A4Q9Y6R1 1079 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 STX2P32856 288 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 PHEXP78562 749 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 HS2ST1Q7LGA3 356 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 ANLNQ9NQW6 1124 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 IL1RL1Q01638 556 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 APOBRQ0VD83 1088 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 DENND2CQ68D51 928 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 RASEFQ8IZ41 740 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 USTQ9Y2C2 406 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 SERPINB6P35237 376 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 GABPAQ06546 454 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 HLA-DOAP06340 250 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 NUCKS1Q9H1E3 243 aaKnown RBP16.17■□□□□ 0.18
PTPN9-206ENST00000618819 PLCB1Q9NQ66 1216 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 ESYT1Q9BSJ8 1104 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 TTF2Q9UNY4 1162 aaKnown RBP16.17■□□□□ 0.18
PTPN9-206ENST00000618819 RTEL1-TNFRSF6BF6WH68 1400 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 BAG3O95817 575 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 APOEP02649 317 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 LDHAL6AQ6ZMR3 332 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 UBL4BQ8N7F7 174 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 VPS37BQ9H9H4 285 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 EFCC1Q9HA90 598 aa16.17■□□□□ 0.18
PTPN9-206ENST00000618819 ASIC2Q16515 512 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 MPRIPQ6WCQ1 1025 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 MRFAP1Q9Y605 127 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 PRDM2Q13029 1718 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 NUCB1Q02818 461 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 PAK2Q13177 524 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 RNF40O75150 1001 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 HARSP12081 509 aaKnown RBP16.16■□□□□ 0.18
PTPN9-206ENST00000618819 CFAP61Q8NHU2 1237 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 NOX5Q96PH1 765 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 PRDM11Q9NQV5 511 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 TRAF5O00463 557 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 TBC1D8BQ0IIM8 1120 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 RNF34Q969K3 372 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 TNNI2P48788 182 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 AK2P54819 239 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 CRNKL1Q9BZJ0 848 aaKnown RBP16.16■□□□□ 0.18
PTPN9-206ENST00000618819 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
PTPN9-206ENST00000618819 POLD1P28340 1107 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 E2F5Q15329 346 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 RILPL1Q5EBL4 403 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 C6orf50Q9HD87 102 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 DAPK3O43293 454 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 PPP2R5AQ15172 486 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 BCL2L12Q9HB09 334 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 SLC8A1P32418 973 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 CCDC105Q8IYK2 499 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 VTI1AQ96AJ9 217 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 VWA3AA6NCI4 1184 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 Q9H521 79 aa16.15■□□□□ 0.18
PTPN9-206ENST00000618819 IQSEC3Q9UPP2 1182 aaPredicted RBP16.15■□□□□ 0.18
PTPN9-206ENST00000618819 ECM2O94769 699 aaPredicted RBP16.14■□□□□ 0.17
PTPN9-206ENST00000618819 LUC7L3O95232 432 aaKnown RBP16.14■□□□□ 0.17
PTPN9-206ENST00000618819 TROVE2P10155 538 aaKnown RBP eCLIP16.14■□□□□ 0.17
PTPN9-206ENST00000618819 SP4Q02446 784 aa16.14■□□□□ 0.17
PTPN9-206ENST00000618819 KLHDC4Q8TBB5 520 aa16.14■□□□□ 0.17
PTPN9-206ENST00000618819 FAM71BQ8TC56 605 aa16.14■□□□□ 0.17
PTPN9-206ENST00000618819 BIRC3Q13489 604 aa16.14■□□□□ 0.17
PTPN9-206ENST00000618819 KLHL14Q9P2G3 628 aa16.14■□□□□ 0.17
PTPN9-206ENST00000618819 IRX4P78413 519 aa16.14■□□□□ 0.17
PTPN9-206ENST00000618819 ESR2Q92731 530 aa16.14■□□□□ 0.17
PTPN9-206ENST00000618819 FAN1Q9Y2M0 1017 aa16.14■□□□□ 0.17
PTPN9-206ENST00000618819 RGS16O15492 202 aaPredicted RBP16.14■□□□□ 0.17
PTPN9-206ENST00000618819 PPFIA4O75335 1185 aa16.14■□□□□ 0.17
PTPN9-206ENST00000618819 PPP1R12AO14974 1030 aaPredicted RBP16.13■□□□□ 0.17
PTPN9-206ENST00000618819 EPB41P11171 864 aaKnown RBP16.13■□□□□ 0.17
PTPN9-206ENST00000618819 POLE2P56282 527 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 CCDC93Q567U6 631 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 DTHD1Q6ZMT9 781 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 KIFAP3Q92845 792 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 CTNNA1P35221 906 aaKnown RBP16.13■□□□□ 0.17
PTPN9-206ENST00000618819 RPS6KA2Q15349 733 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 C16orf71Q8IYS4 520 aaPredicted RBP16.13■□□□□ 0.17
PTPN9-206ENST00000618819 CYP7A1P22680 504 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 UBE3BQ7Z3V4 1068 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 DDX41Q9UJV9 622 aaKnown RBP16.13■□□□□ 0.17
PTPN9-206ENST00000618819 PTPDC1A2A3K4 754 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 SH3BGRP55822 239 aaPredicted RBP16.13■□□□□ 0.17
PTPN9-206ENST00000618819 TTLL3Q9Y4R7 772 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 PTPRCP08575 1304 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 PICALMQ13492 652 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 BCAP29Q9UHQ4 241 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 210.1 ms