RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 ANTXR2P58335 489 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 IQCB1Q15051 598 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 OTUD7BQ6GQQ9 843 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 BRINP3Q76B58 766 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 RAB11FIP4Q86YS3 637 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 ENGASEQ8NFI3 743 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 CCDC85AQ96PX6 553 aaPredicted RBP5.08□□□□□ -1.6
SEC22B-202ENST00000618538 ARID3AQ99856 593 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 ISCA1Q9BUE6 129 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 GPR108Q9NPR9 543 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 DDX19AQ9NUU7 478 aaKnown RBP5.08□□□□□ -1.6
SEC22B-202ENST00000618538 C4AP0C0L4 1744 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 C4BP0C0L5 1744 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 AKAP11Q9UKA4 1901 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 CARMIL3Q8ND23 1372 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 PCDH11XQ9BZA7 1347 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 PCDH11YQ9BZA8 1340 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 RNF113AO15541 343 aaKnown RBP5.08□□□□□ -1.6
SEC22B-202ENST00000618538 WFS1O76024 890 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 IL15P40933 162 aaPredicted RBP5.08□□□□□ -1.6
SEC22B-202ENST00000618538 HAND2P61296 217 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 NKX1-1Q15270 411 aaPredicted RBP5.08□□□□□ -1.6
SEC22B-202ENST00000618538 C6orf132Q5T0Z8 1188 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 NAA16Q6N069 864 aaPredicted RBP5.08□□□□□ -1.6
SEC22B-202ENST00000618538 BICD2Q8TD16 824 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 PUS7LQ9H0K6 701 aaKnown RBP5.08□□□□□ -1.6
SEC22B-202ENST00000618538 HELLSQ9NRZ9 838 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 RCOR1Q9UKL0 485 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 ECM29Q5VYK3 1845 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 NHSL1Q5SYE7 1610 aa5.08□□□□□ -1.6
SEC22B-202ENST00000618538 KIF28PB7ZC32 967 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 CIAO1O76071 339 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 IFIT1P09914 478 aaKnown RBP5.07□□□□□ -1.6
SEC22B-202ENST00000618538 ZNF165P49910 485 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 EVCP57679 992 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 HMGN5P82970 282 aaKnown RBP5.07□□□□□ -1.6
SEC22B-202ENST00000618538 ZSCAN25Q6NSZ9 544 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 CCDC186Q7Z3E2 898 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 MB21D2Q8IYB1 491 aaPredicted RBP5.07□□□□□ -1.6
SEC22B-202ENST00000618538 CCDC191Q8NCU4 936 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 ZCRB1Q8TBF4 217 aaKnown RBP5.07□□□□□ -1.6
SEC22B-202ENST00000618538 CACTINQ8WUQ7 758 aaKnown RBP5.07□□□□□ -1.6
SEC22B-202ENST00000618538 LLPHQ9BRT6 129 aaKnown RBP5.07□□□□□ -1.6
SEC22B-202ENST00000618538 COL4A1P02462 1669 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 MYH7P12883 1935 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 USP27XA6NNY8 438 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 ERVV-2B6SEH9 535 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 H3BQV1 296 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 ZAP70P43403 619 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 HSPA2P54652 639 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 CCAR1Q8IX12 1150 aaKnown RBP5.07□□□□□ -1.6
SEC22B-202ENST00000618538 DHX40Q8IX18 779 aaKnown RBP5.07□□□□□ -1.6
SEC22B-202ENST00000618538 HS6ST3Q8IZP7 471 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 FAM89AQ96GI7 184 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 XAGE2Q96GT9 111 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 PRIMPOLQ96LW4 560 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 SLC4A9Q96Q91 983 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 SENP2Q9HC62 589 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 SEPT9Q9UHD8 586 aaPredicted RBP5.07□□□□□ -1.6
SEC22B-202ENST00000618538 ASAP1Q9ULH1 1129 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 TACC3Q9Y6A5 838 aa5.07□□□□□ -1.6
SEC22B-202ENST00000618538 LRP5O75197 1615 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 LRP6O75581 1613 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 MROH7-TTC4A0A0A0MT08 1334 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 GOLGA6L4A6NEF3 574 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 UBE2Q2LH0YL09 131 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 FGAP02671 866 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 PDIA4P13667 645 aaKnown RBP5.06□□□□□ -1.6
SEC22B-202ENST00000618538 MCAMP43121 646 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 FKBP4Q02790 459 aaKnown RBP eCLIP5.06□□□□□ -1.6
SEC22B-202ENST00000618538 HLFQ16534 295 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 DNTTIP2Q5QJE6 756 aaKnown RBP5.06□□□□□ -1.6
SEC22B-202ENST00000618538 TOM1L2Q6ZVM7 507 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 TBC1D10CQ8IV04 446 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 DNAJC10Q8IXB1 793 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 FMR1NBQ8N0W7 255 aaPredicted RBP5.06□□□□□ -1.6
SEC22B-202ENST00000618538 FBXL16Q8N461 479 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 AIFM3Q96NN9 605 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 ZSCAN16Q9H4T2 348 aaPredicted RBP5.06□□□□□ -1.6
SEC22B-202ENST00000618538 PRDM11Q9NQV5 511 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 PCDHA7Q9UN72 937 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 CLIC4Q9Y696 253 aa5.06□□□□□ -1.6
SEC22B-202ENST00000618538 CSF1RP07333 972 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 HMGB1P09429 215 aaKnown RBP5.05□□□□□ -1.6
SEC22B-202ENST00000618538 TCIRG1Q13488 830 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 NAA30Q147X3 362 aaPredicted RBP5.05□□□□□ -1.6
SEC22B-202ENST00000618538 NBPF11Q86T75 865 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 ZNF598Q86UK7 904 aaKnown RBP5.05□□□□□ -1.6
SEC22B-202ENST00000618538 CADPS2Q86UW7 1296 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 CRIPAKQ8N1N5 446 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 VGLL2Q8N8G2 317 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.05□□□□□ -1.6
SEC22B-202ENST00000618538 ZNF274Q96GC6 653 aaPredicted RBP5.05□□□□□ -1.6
SEC22B-202ENST00000618538 PRR14Q9BWN1 585 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 TRIM5Q9C035 493 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 ZMYND15Q9H091 742 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 ATG3Q9NT62 314 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 ITGB4P16144 1822 aa5.05□□□□□ -1.6
SEC22B-202ENST00000618538 SOS2Q07890 1332 aaPredicted RBP5.05□□□□□ -1.6
SEC22B-202ENST00000618538 ATRNO75882 1429 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms