RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 RASGRF1Q13972 1273 aa23.23■■□□□ 1.31
PCDHA13-203ENST00000617769 LINC00301Q8NCQ3 95 aa23.23■■□□□ 1.31
PCDHA13-203ENST00000617769 AK7Q96M32 723 aa23.23■■□□□ 1.31
PCDHA13-203ENST00000617769 SDF4Q9BRK5 362 aa23.23■■□□□ 1.31
PCDHA13-203ENST00000617769 IQSEC3Q9UPP2 1182 aaPredicted RBP23.23■■□□□ 1.31
PCDHA13-203ENST00000617769 CCDC24Q8N4L8 307 aa23.23■■□□□ 1.31
PCDHA13-203ENST00000617769 ORC3Q9UBD5 711 aaPredicted RBP23.23■■□□□ 1.31
PCDHA13-203ENST00000617769 MYO5AQ9Y4I1 1855 aaKnown RBP23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 COL4A1P02462 1669 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 APPP05067 770 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 SLC5A1P13866 664 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 ARID4AP29374 1257 aaPredicted RBP23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 IGHMBP2P38935 993 aaKnown RBP23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 AOPEPQ8N6M6 819 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 FBXO18Q8NFZ0 1043 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 NKX2-3Q8TAU0 364 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 CTIFO43310 598 aaKnown RBP23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 STK38Q15208 465 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 SF3A1Q15459 793 aaKnown RBP23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 CEP57L1Q8IYX8 460 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 SPATA5Q8NB90 893 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 NCOA7Q8NI08 942 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 ZNF512BQ96KM6 892 aaPredicted RBP23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 ABCC12Q96J65 1359 aa23.22■■□□□ 1.31
PCDHA13-203ENST00000617769 DHX16O60231 1041 aaKnown RBP23.21■■□□□ 1.31
PCDHA13-203ENST00000617769 PDE6AP16499 860 aa23.21■■□□□ 1.31
PCDHA13-203ENST00000617769 TPD52L1Q16890 204 aaPredicted RBP23.21■■□□□ 1.31
PCDHA13-203ENST00000617769 FILIP1Q7Z7B0 1213 aa23.21■■□□□ 1.31
PCDHA13-203ENST00000617769 RALYLQ86SE5 291 aaKnown RBP23.21■■□□□ 1.31
PCDHA13-203ENST00000617769 SRP68Q9UHB9 627 aaKnown RBP23.21■■□□□ 1.31
PCDHA13-203ENST00000617769 USP21Q9UK80 565 aa23.21■■□□□ 1.31
PCDHA13-203ENST00000617769 ZNF213O14771 459 aa23.21■■□□□ 1.31
PCDHA13-203ENST00000617769 ZNF652Q9Y2D9 606 aa23.21■■□□□ 1.31
PCDHA13-203ENST00000617769 CPLX1O14810 134 aa23.2■■□□□ 1.3
PCDHA13-203ENST00000617769 CHRNDQ07001 517 aa23.2■■□□□ 1.3
PCDHA13-203ENST00000617769 TTF1Q15361 905 aaPredicted RBP23.2■■□□□ 1.3
PCDHA13-203ENST00000617769 A0A1W2PQ27 194 aa23.2■■□□□ 1.3
PCDHA13-203ENST00000617769 A0A1W2PQ64 194 aa23.2■■□□□ 1.3
PCDHA13-203ENST00000617769 A0A1W2PQD8 194 aa23.2■■□□□ 1.3
PCDHA13-203ENST00000617769 UQCRFS1P1P0C7P4 283 aa23.2■■□□□ 1.3
PCDHA13-203ENST00000617769 TBC1D9BQ66K14 1250 aa23.2■■□□□ 1.3
PCDHA13-203ENST00000617769 PPP4R3BQ5MIZ7 849 aa23.19■■□□□ 1.3
PCDHA13-203ENST00000617769 MYSM1Q5VVJ2 828 aa23.19■■□□□ 1.3
PCDHA13-203ENST00000617769 KCNG4Q8TDN1 519 aa23.19■■□□□ 1.3
PCDHA13-203ENST00000617769 POLR3EQ9NVU0 708 aa23.19■■□□□ 1.3
PCDHA13-203ENST00000617769 KIF28PB7ZC32 967 aa23.19■■□□□ 1.3
PCDHA13-203ENST00000617769 AMIGO3Q86WK7 504 aa23.19■■□□□ 1.3
PCDHA13-203ENST00000617769 MAGEB6Q8N7X4 407 aa23.19■■□□□ 1.3
PCDHA13-203ENST00000617769 NAT10Q9H0A0 1025 aaKnown RBP23.19■■□□□ 1.3
PCDHA13-203ENST00000617769 SPTLC2O15270 562 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 ANKRD7Q92527 254 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 NBPF3Q9H094 633 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 INCENPQ9NQS7 918 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 DDX60Q8IY21 1712 aaKnown RBP23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 EP400Q96L91 3159 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 TCRBV5S4A2TA0A5A2 114 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 USP27XA6NNY8 438 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 SMTNL1A8MU46 457 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 SKILP12757 684 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 GTF2E1P29083 439 aaPredicted RBP23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 DPCR1Q3MIW9 517 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 PDCL2Q8N4E4 241 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 KIAA1468Q9P260 1216 aa23.18■■□□□ 1.3
PCDHA13-203ENST00000617769 YEATS4O95619 227 aa23.17■■□□□ 1.3
PCDHA13-203ENST00000617769 LRP5O75197 1615 aa23.17■■□□□ 1.3
PCDHA13-203ENST00000617769 NEDD4P46934 1319 aa23.17■■□□□ 1.3
PCDHA13-203ENST00000617769 CCDC69A6NI79 296 aa23.17■■□□□ 1.3
PCDHA13-203ENST00000617769 RBM6P78332 1123 aaKnown RBP23.17■■□□□ 1.3
PCDHA13-203ENST00000617769 UBE3CQ15386 1083 aa23.17■■□□□ 1.3
PCDHA13-203ENST00000617769 BRAPQ7Z569 592 aa23.17■■□□□ 1.3
PCDHA13-203ENST00000617769 FNBP4Q8N3X1 1017 aaPredicted RBP23.17■■□□□ 1.3
PCDHA13-203ENST00000617769 RREB1Q92766 1687 aa23.16■■□□□ 1.3
PCDHA13-203ENST00000617769 SYNE3Q6ZMZ3 975 aa23.16■■□□□ 1.3
PCDHA13-203ENST00000617769 TBC1D10CQ8IV04 446 aa23.16■■□□□ 1.3
PCDHA13-203ENST00000617769 AIDAQ96BJ3 306 aa23.16■■□□□ 1.3
PCDHA13-203ENST00000617769 GNPATO15228 680 aa23.16■■□□□ 1.3
PCDHA13-203ENST00000617769 NEMFO60524 1076 aa23.16■■□□□ 1.3
PCDHA13-203ENST00000617769 CLEC4GQ6UXB4 293 aa23.16■■□□□ 1.3
PCDHA13-203ENST00000617769 TAOK2Q9UL54 1235 aa23.16■■□□□ 1.3
PCDHA13-203ENST00000617769 TAF1P21675 1872 aa23.15■■□□□ 1.3
PCDHA13-203ENST00000617769 KIF23Q02241 960 aaPredicted RBP23.15■■□□□ 1.3
PCDHA13-203ENST00000617769 ZNF592Q92610 1267 aa23.15■■□□□ 1.3
PCDHA13-203ENST00000617769 AIFM3Q96NN9 605 aa23.15■■□□□ 1.3
PCDHA13-203ENST00000617769 ARMT1Q9H993 441 aa23.15■■□□□ 1.3
PCDHA13-203ENST00000617769 MYH7P12883 1935 aa23.15■■□□□ 1.3
PCDHA13-203ENST00000617769 BIN1O00499 593 aa23.14■■□□□ 1.3
PCDHA13-203ENST00000617769 GYG1P46976 350 aa23.14■■□□□ 1.3
PCDHA13-203ENST00000617769 CCZ1BP86790 482 aa23.14■■□□□ 1.3
PCDHA13-203ENST00000617769 CCZ1P86791 482 aaPredicted RBP23.14■■□□□ 1.3
PCDHA13-203ENST00000617769 ZRSR1Q15695 479 aaKnown RBP23.14■■□□□ 1.3
PCDHA13-203ENST00000617769 PAXBP1Q9Y5B6 917 aa23.14■■□□□ 1.3
PCDHA13-203ENST00000617769 ZNF202O95125 648 aa23.14■■□□□ 1.29
PCDHA13-203ENST00000617769 NCBP1Q09161 790 aaKnown RBP23.14■■□□□ 1.29
PCDHA13-203ENST00000617769 ANO1Q5XXA6 986 aa23.14■■□□□ 1.29
PCDHA13-203ENST00000617769 NBPF11Q86T75 865 aa23.14■■□□□ 1.29
PCDHA13-203ENST00000617769 STRBPQ96SI9 672 aaKnown RBP23.14■■□□□ 1.29
PCDHA13-203ENST00000617769 COL5A3P25940 1745 aaPredicted RBP23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 PRKAB2O43741 272 aa23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 MBD4O95243 580 aa23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 RXRAP19793 462 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms