RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 JAG2Q9Y219 1238 aa20.39■□□□□ 0.85
PCDHGC3-205ENST00000617641 POLRMTO00411 1230 aaKnown RBP20.38■□□□□ 0.85
PCDHGC3-205ENST00000617641 DYNLL1P63167 89 aaKnown RBP20.38■□□□□ 0.85
PCDHGC3-205ENST00000617641 PANK2Q9BZ23 570 aa20.38■□□□□ 0.85
PCDHGC3-205ENST00000617641 ANGEL1Q9UNK9 670 aaKnown RBP20.38■□□□□ 0.85
PCDHGC3-205ENST00000617641 SH2B2O14492 632 aaPredicted RBP20.38■□□□□ 0.85
PCDHGC3-205ENST00000617641 APBA3O96018 575 aa20.38■□□□□ 0.85
PCDHGC3-205ENST00000617641 AKNAD1Q5T1N1 836 aa20.38■□□□□ 0.85
PCDHGC3-205ENST00000617641 XDHP47989 1333 aa20.37■□□□□ 0.85
PCDHGC3-205ENST00000617641 MECOMQ03112 1051 aa20.37■□□□□ 0.85
PCDHGC3-205ENST00000617641 NSUN4Q96CB9 384 aaKnown RBP20.37■□□□□ 0.85
PCDHGC3-205ENST00000617641 LEMD3Q9Y2U8 911 aa20.37■□□□□ 0.85
PCDHGC3-205ENST00000617641 STK11IPQ8N1F8 1099 aa20.37■□□□□ 0.85
PCDHGC3-205ENST00000617641 GPR101Q96P66 508 aaPredicted RBP20.37■□□□□ 0.85
PCDHGC3-205ENST00000617641 SENP2Q9HC62 589 aa20.37■□□□□ 0.85
PCDHGC3-205ENST00000617641 KDM4AO75164 1064 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 PRDX5P30044 214 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 UBE2HP62256 183 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 KRT85P78386 507 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 RESTQ13127 1097 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 MFSD6Q6ZSS7 791 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 CHMP4CQ96CF2 233 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 GPSM2P81274 684 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 CSPP1Q1MSJ5 1256 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 STAG1Q8WVM7 1258 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 RBM17Q96I25 401 aaKnown RBP20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 ZSWIM5Q9P217 1185 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 KIF3AQ9Y496 699 aa20.36■□□□□ 0.85
PCDHGC3-205ENST00000617641 PLSCR1O15162 318 aa20.35■□□□□ 0.85
PCDHGC3-205ENST00000617641 FDPSP14324 419 aaKnown RBP20.35■□□□□ 0.85
PCDHGC3-205ENST00000617641 RRP12Q5JTH9 1297 aaKnown RBP20.35■□□□□ 0.85
PCDHGC3-205ENST00000617641 IGDCC4Q8TDY8 1250 aa20.35■□□□□ 0.85
PCDHGC3-205ENST00000617641 TMEM87BQ96K49 555 aa20.35■□□□□ 0.85
PCDHGC3-205ENST00000617641 CNNM2Q9H8M5 875 aa20.35■□□□□ 0.85
PCDHGC3-205ENST00000617641 SYCE3A1L190 88 aa20.35■□□□□ 0.85
PCDHGC3-205ENST00000617641 PPARAQ07869 468 aa20.35■□□□□ 0.85
PCDHGC3-205ENST00000617641 UBE2Q2Q8WVN8 375 aa20.35■□□□□ 0.85
PCDHGC3-205ENST00000617641 TOMM22Q9NS69 142 aa20.35■□□□□ 0.85
PCDHGC3-205ENST00000617641 TMEM67Q5HYA8 995 aa20.34■□□□□ 0.85
PCDHGC3-205ENST00000617641 TTC6Q86TZ1 520 aa20.34■□□□□ 0.85
PCDHGC3-205ENST00000617641 AKT1S1Q96B36 256 aa20.34■□□□□ 0.85
PCDHGC3-205ENST00000617641 KRT23Q9C075 422 aa20.34■□□□□ 0.85
PCDHGC3-205ENST00000617641 LY9Q9HBG7 655 aa20.34■□□□□ 0.85
PCDHGC3-205ENST00000617641 TFIP11Q9UBB9 837 aaKnown RBP20.34■□□□□ 0.85
PCDHGC3-205ENST00000617641 MINDY4BA8MYZ0 360 aa20.33■□□□□ 0.85
PCDHGC3-205ENST00000617641 SMIM22K7EJ46 135 aa20.33■□□□□ 0.85
PCDHGC3-205ENST00000617641 DHX16O60231 1041 aaKnown RBP20.33■□□□□ 0.85
PCDHGC3-205ENST00000617641 COL23A1Q86Y22 540 aaPredicted RBP20.33■□□□□ 0.85
PCDHGC3-205ENST00000617641 RXRAP19793 462 aa20.33■□□□□ 0.84
PCDHGC3-205ENST00000617641 GUCY1B3Q02153 619 aa20.33■□□□□ 0.84
PCDHGC3-205ENST00000617641 APOA5Q6Q788 366 aa20.33■□□□□ 0.84
PCDHGC3-205ENST00000617641 SYAP1Q96A49 352 aaPredicted RBP20.33■□□□□ 0.84
PCDHGC3-205ENST00000617641 MAST2Q6P0Q8 1798 aa20.33■□□□□ 0.84
PCDHGC3-205ENST00000617641 CPLX1O14810 134 aa20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 IFIT3O14879 490 aaKnown RBP20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 UFL1O94874 794 aa20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 NFXL1Q6ZNB6 911 aa20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 BAZ2AQ9UIF9 1905 aaKnown RBP20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 HMGB2P26583 209 aaKnown RBP20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 RXRBP28702 533 aa20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 HOXA10P31260 410 aaPredicted RBP20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 TDRD7Q8NHU6 1098 aaKnown RBP20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 ZSCAN16Q9H4T2 348 aaPredicted RBP20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 AATFQ9NY61 560 aaKnown RBP eCLIP20.32■□□□□ 0.84
PCDHGC3-205ENST00000617641 METAP2P50579 478 aaKnown RBP eCLIP20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 ZNF804AQ7Z570 1209 aa20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 BRIP1Q9BX63 1249 aa20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 CCDC88AQ3V6T2 1871 aa20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 CYP2D7A0A087X1C5 515 aa20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 ZBTB22O15209 634 aa20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 LRSAM1Q6UWE0 723 aa20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 SGMS1Q86VZ5 419 aa20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 MICU3Q86XE3 530 aa20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 ZKSCAN3Q9BRR0 538 aa20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 RNF41Q9H4P4 317 aaPredicted RBP20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 ORC3Q9UBD5 711 aaPredicted RBP20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 ANAPC4Q9UJX5 808 aa20.31■□□□□ 0.84
PCDHGC3-205ENST00000617641 BBOX1O75936 387 aa20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 ADD1P35611 737 aaKnown RBP20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 C15orf52Q6ZUT6 534 aaKnown RBP20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 DZIP1Q86YF9 867 aaKnown RBP20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 CCDC144CPQ8IYA2 1237 aa20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 MYL10Q9BUA6 226 aa20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 GGA1Q9UJY5 639 aa20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 KLRG2A4D1S0 409 aaPredicted RBP20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 LIFRP42702 1097 aa20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 SPTY2D1Q68D10 685 aaPredicted RBP20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 SPATA32Q96LK8 384 aa20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 CRAMP1Q96RY5 1269 aa20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 SCAND2PQ9GZW5 306 aaPredicted RBP20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 ELP1O95163 1332 aa20.3■□□□□ 0.84
PCDHGC3-205ENST00000617641 ANKRD31Q8N7Z5 1873 aa20.29■□□□□ 0.84
PCDHGC3-205ENST00000617641 ZBTB43O43298 467 aa20.29■□□□□ 0.84
PCDHGC3-205ENST00000617641 ATP2B4P23634 1241 aa20.29■□□□□ 0.84
PCDHGC3-205ENST00000617641 CDC27P30260 824 aa20.29■□□□□ 0.84
PCDHGC3-205ENST00000617641 NLGN1Q8N2Q7 840 aa20.29■□□□□ 0.84
PCDHGC3-205ENST00000617641 WDR66Q8TBY9 1149 aa20.29■□□□□ 0.84
PCDHGC3-205ENST00000617641 LEO1Q8WVC0 666 aaPredicted RBP20.29■□□□□ 0.84
PCDHGC3-205ENST00000617641 OTUD7BQ6GQQ9 843 aa20.28■□□□□ 0.84
PCDHGC3-205ENST00000617641 CCDC69A6NI79 296 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms