RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 FAM84BQ96KN1 310 aaPredicted RBP10.73□□□□□ -0.69
GPC6-202ENST00000617456 PUS3Q9BZE2 481 aaKnown RBP10.73□□□□□ -0.69
GPC6-202ENST00000617456 CPA4Q9UI42 421 aa10.73□□□□□ -0.69
GPC6-202ENST00000617456 ZSWIM8A7E2V4 1837 aa10.72□□□□□ -0.69
GPC6-202ENST00000617456 IRF6O14896 467 aa10.72□□□□□ -0.69
GPC6-202ENST00000617456 FRAT2O75474 233 aaPredicted RBP10.72□□□□□ -0.69
GPC6-202ENST00000617456 CT47B1P0C2W7 299 aaPredicted RBP10.72□□□□□ -0.69
GPC6-202ENST00000617456 UBE4AQ14139 1066 aa10.72□□□□□ -0.69
GPC6-202ENST00000617456 VPS37DQ86XT2 251 aa10.72□□□□□ -0.69
GPC6-202ENST00000617456 SHISA4Q96DD7 197 aa10.72□□□□□ -0.69
GPC6-202ENST00000617456 SPINK5Q9NQ38 1064 aaPredicted RBP10.72□□□□□ -0.69
GPC6-202ENST00000617456 C9orf78Q9NZ63 289 aaPredicted RBP10.72□□□□□ -0.69
GPC6-202ENST00000617456 RBM27Q9P2N5 1060 aaKnown RBP10.72□□□□□ -0.69
GPC6-202ENST00000617456 A0A1B0GUL6 1792 aa10.71□□□□□ -0.69
GPC6-202ENST00000617456 GRM8O00222 908 aa10.71□□□□□ -0.69
GPC6-202ENST00000617456 CACNA1FO60840 1977 aa10.71□□□□□ -0.69
GPC6-202ENST00000617456 FMNL1O95466 1100 aaPredicted RBP10.71□□□□□ -0.69
GPC6-202ENST00000617456 PTPRCP08575 1304 aa10.71□□□□□ -0.69
GPC6-202ENST00000617456 CTGFP29279 349 aa10.71□□□□□ -0.69
GPC6-202ENST00000617456 PSMC4P43686 418 aa10.71□□□□□ -0.69
GPC6-202ENST00000617456 RAET1EQ8TD07 263 aa10.71□□□□□ -0.69
GPC6-202ENST00000617456 TMOD2Q9NZR1 351 aa10.71□□□□□ -0.69
GPC6-202ENST00000617456 BIN2Q9UBW5 565 aaPredicted RBP10.71□□□□□ -0.69
GPC6-202ENST00000617456 SZT2Q5T011 3432 aa10.71□□□□□ -0.7
GPC6-202ENST00000617456 UTYO14607 1347 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 CCER2I3L3R5 266 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 GNRH1P01148 92 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 OSBPP22059 807 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 INPP5BP32019 993 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 PRMT2P55345 433 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 PPIL2Q13356 520 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 SLC4A10Q6U841 1118 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 C17orf99Q6UX52 265 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 MIGA2Q7L4E1 593 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.7□□□□□ -0.7
GPC6-202ENST00000617456 TEKT1Q969V4 418 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 SUCLG2Q96I99 432 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 TRIM47Q96LD4 638 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 ZCCHC17Q9NP64 241 aaKnown RBP10.7□□□□□ -0.7
GPC6-202ENST00000617456 SRRDQ9UH36 339 aa10.7□□□□□ -0.7
GPC6-202ENST00000617456 MYPNQ86TC9 1320 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 RANBP2P49792 3224 aaKnown RBP10.69□□□□□ -0.7
GPC6-202ENST00000617456 PDHXO00330 501 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 CCL5P13501 91 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 HOXD10P28358 340 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 GRK4P32298 578 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 ALDH1L2Q3SY69 923 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 CAVIN4Q5BKX8 364 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 METTL24Q5JXM2 366 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 DCAF15Q66K64 600 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 FBXO33Q7Z6M2 555 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 NKX2-3Q8TAU0 364 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 TBC1D22AQ8WUA7 517 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 ZNF341Q9BYN7 854 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 SRCIN1Q9C0H9 1055 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 RNF208Q9H0X6 261 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 RIPOR2Q9Y4F9 1068 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 ARAP2Q8WZ64 1704 aa10.69□□□□□ -0.7
GPC6-202ENST00000617456 MROH5Q6ZUA9 1318 aa10.68□□□□□ -0.7
GPC6-202ENST00000617456 HDLBPQ00341 1268 aaKnown RBP10.68□□□□□ -0.7
GPC6-202ENST00000617456 PPATQ06203 517 aa10.68□□□□□ -0.7
GPC6-202ENST00000617456 SLFN5Q08AF3 891 aa10.68□□□□□ -0.7
GPC6-202ENST00000617456 LRRC24Q50LG9 513 aa10.68□□□□□ -0.7
GPC6-202ENST00000617456 APOBEC3HQ6NTF7 200 aaKnown RBP10.68□□□□□ -0.7
GPC6-202ENST00000617456 ANKRD23Q86SG2 305 aa10.68□□□□□ -0.7
GPC6-202ENST00000617456 FAM83AQ86UY5 434 aa10.68□□□□□ -0.7
GPC6-202ENST00000617456 TRMT2AQ8IZ69 625 aaKnown RBP10.68□□□□□ -0.7
GPC6-202ENST00000617456 SLC17A8Q8NDX2 589 aa10.68□□□□□ -0.7
GPC6-202ENST00000617456 HOOK2Q96ED9 719 aa10.68□□□□□ -0.7
GPC6-202ENST00000617456 ZDHHC15Q96MV8 337 aa10.68□□□□□ -0.7
GPC6-202ENST00000617456 HTATIP2Q9BUP3 242 aa10.68□□□□□ -0.7
GPC6-202ENST00000617456 DLL1O00548 723 aa10.67□□□□□ -0.7
GPC6-202ENST00000617456 GJB1P08034 283 aa10.67□□□□□ -0.7
GPC6-202ENST00000617456 GJA8P48165 433 aa10.67□□□□□ -0.7
GPC6-202ENST00000617456 BCAMP50895 628 aa10.67□□□□□ -0.7
GPC6-202ENST00000617456 UBXN2AP68543 259 aa10.67□□□□□ -0.7
GPC6-202ENST00000617456 PRKCZQ05513 592 aa10.67□□□□□ -0.7
GPC6-202ENST00000617456 NR2E3Q9Y5X4 410 aa10.67□□□□□ -0.7
GPC6-202ENST00000617456 ADGRA2Q96PE1 1338 aa10.66□□□□□ -0.7
GPC6-202ENST00000617456 ZBTB7BO15156 539 aaPredicted RBP10.66□□□□□ -0.7
GPC6-202ENST00000617456 FARP2O94887 1054 aaPredicted RBP10.66□□□□□ -0.7
GPC6-202ENST00000617456 CYP2C8P10632 490 aa10.66□□□□□ -0.7
GPC6-202ENST00000617456 FCGRTP55899 365 aa10.66□□□□□ -0.7
GPC6-202ENST00000617456 TCP10Q12799 353 aa10.66□□□□□ -0.7
GPC6-202ENST00000617456 RABL6Q3YEC7 729 aaPredicted RBP10.66□□□□□ -0.7
GPC6-202ENST00000617456 FKBP1CQ5VVH2 108 aa10.66□□□□□ -0.7
GPC6-202ENST00000617456 MRPL50Q8N5N7 158 aaKnown RBP10.66□□□□□ -0.7
GPC6-202ENST00000617456 KAZALD1Q96I82 304 aa10.66□□□□□ -0.7
GPC6-202ENST00000617456 PARK7Q99497 189 aaKnown RBP10.66□□□□□ -0.7
GPC6-202ENST00000617456 UNC93B1Q9H1C4 597 aa10.66□□□□□ -0.7
GPC6-202ENST00000617456 BICC1Q9H694 974 aaKnown RBP10.66□□□□□ -0.7
GPC6-202ENST00000617456 HDAC5Q9UQL6 1122 aa10.66□□□□□ -0.7
GPC6-202ENST00000617456 MAST3O60307 1309 aa10.65□□□□□ -0.7
GPC6-202ENST00000617456 NBPF7P0C2Y1 421 aaPredicted RBP10.65□□□□□ -0.7
GPC6-202ENST00000617456 PLCB2Q00722 1185 aa10.65□□□□□ -0.7
GPC6-202ENST00000617456 UBE2Q1Q7Z7E8 422 aa10.65□□□□□ -0.7
GPC6-202ENST00000617456 KLHDC4Q8TBB5 520 aa10.65□□□□□ -0.7
GPC6-202ENST00000617456 U2AF1L4Q8WU68 220 aaKnown RBP10.65□□□□□ -0.7
GPC6-202ENST00000617456 FAM151AQ8WW52 585 aa10.65□□□□□ -0.7
GPC6-202ENST00000617456 MRIQ9BWK5 157 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms