RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 USP40Q9NVE5 1235 aa38.72■■■■□ 3.79
FMR1-216ENST00000616614 RASA3Q14644 834 aa38.71■■■■□ 3.79
FMR1-216ENST00000616614 STAP2Q9UGK3 403 aa38.71■■■■□ 3.79
FMR1-216ENST00000616614 LDHCP07864 332 aa38.7■■■■□ 3.79
FMR1-216ENST00000616614 MYO5AQ9Y4I1 1855 aaKnown RBP38.69■■■■□ 3.78
FMR1-216ENST00000616614 TMEM88BA6NKF7 163 aa38.69■■■■□ 3.78
FMR1-216ENST00000616614 IGSF3O75054 1194 aa38.69■■■■□ 3.78
FMR1-216ENST00000616614 PDE1AP54750 535 aa38.69■■■■□ 3.78
FMR1-216ENST00000616614 MAP3K12Q12852 859 aa38.69■■■■□ 3.78
FMR1-216ENST00000616614 MAGEB6Q8N7X4 407 aa38.69■■■■□ 3.78
FMR1-216ENST00000616614 CNTNAP1P78357 1384 aa38.69■■■■□ 3.78
FMR1-216ENST00000616614 ECM29Q5VYK3 1845 aa38.69■■■■□ 3.78
FMR1-216ENST00000616614 MYH2Q9UKX2 1941 aa38.68■■■■□ 3.78
FMR1-216ENST00000616614 NEFLP07196 543 aa38.68■■■■□ 3.78
FMR1-216ENST00000616614 RHBDL3P58872 404 aa38.68■■■■□ 3.78
FMR1-216ENST00000616614 NFIAQ12857 509 aa38.68■■■■□ 3.78
FMR1-216ENST00000616614 CDAN1Q8IWY9 1227 aa38.67■■■■□ 3.78
FMR1-216ENST00000616614 CYP7A1P22680 504 aa38.66■■■■□ 3.78
FMR1-216ENST00000616614 CREBZFQ9NS37 354 aa38.66■■■■□ 3.78
FMR1-216ENST00000616614 GLRX3O76003 335 aaKnown RBP38.65■■■■□ 3.78
FMR1-216ENST00000616614 MAP4K4O95819 1239 aaPredicted RBP38.65■■■■□ 3.78
FMR1-216ENST00000616614 FKBP1CQ5VVH2 108 aa38.65■■■■□ 3.78
FMR1-216ENST00000616614 TMEM39BQ9GZU3 492 aa38.65■■■■□ 3.78
FMR1-216ENST00000616614 ERC2O15083 957 aa38.64■■■■□ 3.78
FMR1-216ENST00000616614 CHGBP05060 677 aa38.64■■■■□ 3.78
FMR1-216ENST00000616614 TNFAIP1Q13829 316 aa38.64■■■■□ 3.78
FMR1-216ENST00000616614 SLFNL1Q499Z3 407 aa38.64■■■■□ 3.78
FMR1-216ENST00000616614 SLC9C2Q5TAH2 1124 aa38.64■■■■□ 3.78
FMR1-216ENST00000616614 TEPSINQ96N21 525 aa38.64■■■■□ 3.78
FMR1-216ENST00000616614 TMOD2Q9NZR1 351 aa38.64■■■■□ 3.78
FMR1-216ENST00000616614 FAM198AQ9UFP1 575 aa38.64■■■■□ 3.78
FMR1-216ENST00000616614 PPP2R3BQ9Y5P8 575 aa38.64■■■■□ 3.78
FMR1-216ENST00000616614 DOCK2Q92608 1830 aa38.64■■■■□ 3.78
FMR1-216ENST00000616614 PDE6AP16499 860 aa38.63■■■■□ 3.78
FMR1-216ENST00000616614 PLEKHM2Q8IWE5 1019 aa38.63■■■■□ 3.78
FMR1-216ENST00000616614 AATFQ9NY61 560 aaKnown RBP eCLIP38.63■■■■□ 3.78
FMR1-216ENST00000616614 MAST2Q6P0Q8 1798 aa38.63■■■■□ 3.77
FMR1-216ENST00000616614 WDHD1O75717 1129 aaPredicted RBP38.63■■■■□ 3.77
FMR1-216ENST00000616614 PDE4AP27815 886 aa38.63■■■■□ 3.77
FMR1-216ENST00000616614 NBPF12Q5TAG4 269 aaPredicted RBP38.63■■■■□ 3.77
FMR1-216ENST00000616614 TCRBV5S4A2TA0A5A2 114 aa38.62■■■■□ 3.77
FMR1-216ENST00000616614 PPP4CP60510 307 aa38.62■■■■□ 3.77
FMR1-216ENST00000616614 RFX7Q2KHR2 1363 aa38.61■■■■□ 3.77
FMR1-216ENST00000616614 DYNLL1P63167 89 aaKnown RBP38.61■■■■□ 3.77
FMR1-216ENST00000616614 FAM83AQ86UY5 434 aa38.61■■■■□ 3.77
FMR1-216ENST00000616614 ZFPM1Q8IX07 1006 aa38.61■■■■□ 3.77
FMR1-216ENST00000616614 SH3RF3Q8TEJ3 882 aaPredicted RBP38.61■■■■□ 3.77
FMR1-216ENST00000616614 TNNI2P48788 182 aa38.6■■■■□ 3.77
FMR1-216ENST00000616614 TCP10Q12799 353 aa38.6■■■■□ 3.77
FMR1-216ENST00000616614 MIGA1Q8NAN2 632 aa38.6■■■■□ 3.77
FMR1-216ENST00000616614 IDI2Q9BXS1 227 aa38.6■■■■□ 3.77
FMR1-216ENST00000616614 DDX4Q9NQI0 724 aaKnown RBP38.6■■■■□ 3.77
FMR1-216ENST00000616614 ZNF532Q9HCE3 1301 aa38.6■■■■□ 3.77
FMR1-216ENST00000616614 SSC5DA1L4H1 1573 aa38.59■■■■□ 3.77
FMR1-216ENST00000616614 GBA2Q9HCG7 927 aaPredicted RBP38.59■■■■□ 3.77
FMR1-216ENST00000616614 ADD2P35612 726 aa38.58■■■■□ 3.77
FMR1-216ENST00000616614 MOB2Q70IA6 237 aa38.58■■■■□ 3.77
FMR1-216ENST00000616614 KBTBD3Q8NAB2 608 aa38.58■■■■□ 3.77
FMR1-216ENST00000616614 FZD1Q9UP38 647 aa38.58■■■■□ 3.77
FMR1-216ENST00000616614 TRPM7Q96QT4 1865 aa38.57■■■■□ 3.77
FMR1-216ENST00000616614 BAG3O95817 575 aa38.57■■■■□ 3.77
FMR1-216ENST00000616614 RGS3P49796 1198 aa38.57■■■■□ 3.77
FMR1-216ENST00000616614 FAM151AQ8WW52 585 aa38.57■■■■□ 3.77
FMR1-216ENST00000616614 TLL2Q9Y6L7 1015 aa38.57■■■■□ 3.77
FMR1-216ENST00000616614 TMED8Q6PL24 325 aaPredicted RBP38.56■■■■□ 3.76
FMR1-216ENST00000616614 SAPCD2Q86UD0 394 aa38.56■■■■□ 3.76
FMR1-216ENST00000616614 OSBPL3Q9H4L5 887 aa38.56■■■■□ 3.76
FMR1-216ENST00000616614 ABT1Q9ULW3 272 aaKnown RBP38.56■■■■□ 3.76
FMR1-216ENST00000616614 CEP350Q5VT06 3117 aa38.55■■■■□ 3.76
FMR1-216ENST00000616614 NOL10Q9BSC4 688 aaKnown RBP38.55■■■■□ 3.76
FMR1-216ENST00000616614 DDX24Q9GZR7 859 aaKnown RBP eCLIP38.55■■■■□ 3.763e-6■□□□□ 8.5
FMR1-216ENST00000616614 PICALMQ13492 652 aa38.54■■■■□ 3.76
FMR1-216ENST00000616614 PRKG1Q13976 671 aa38.54■■■■□ 3.76
FMR1-216ENST00000616614 TEX11Q8IYF3 940 aa38.54■■■■□ 3.76
FMR1-216ENST00000616614 C2orf69Q8N8R5 385 aa38.54■■■■□ 3.76
FMR1-216ENST00000616614 RIOK1Q9BRS2 568 aaKnown RBP38.54■■■■□ 3.76
FMR1-216ENST00000616614 SUPT20HL1Q3ZLR7 823 aa38.53■■■■□ 3.76
FMR1-216ENST00000616614 DNAJC5GQ8N7S2 189 aa38.53■■■■□ 3.76
FMR1-216ENST00000616614 ENTPD3O75355 529 aa38.52■■■■□ 3.76
FMR1-216ENST00000616614 CENPQQ7L2Z9 268 aaPredicted RBP38.52■■■■□ 3.76
FMR1-216ENST00000616614 SH3BP5LQ7L8J4 393 aa38.52■■■■□ 3.76
FMR1-216ENST00000616614 NF2P35240 595 aa38.51■■■■□ 3.76
FMR1-216ENST00000616614 UBE3CQ15386 1083 aa38.51■■■■□ 3.76
FMR1-216ENST00000616614 CCDC136Q96JN2 1154 aa38.51■■■■□ 3.76
FMR1-216ENST00000616614 PLCG2P16885 1265 aa38.5■■■■□ 3.75
FMR1-216ENST00000616614 MKRN1Q9UHC7 482 aaKnown RBP38.5■■■■□ 3.75
FMR1-216ENST00000616614 RASSF10A6NK89 507 aa38.49■■■■□ 3.75
FMR1-216ENST00000616614 TGFBRAP1Q8WUH2 860 aa38.49■■■■□ 3.75
FMR1-216ENST00000616614 RPAP1Q9BWH6 1393 aaPredicted RBP38.49■■■■□ 3.75
FMR1-216ENST00000616614 MAGEB6P1A0A0J9YX57 407 aa38.48■■■■□ 3.75
FMR1-216ENST00000616614 UBE2Q2LH0YL09 131 aa38.48■■■■□ 3.75
FMR1-216ENST00000616614 NPM3O75607 178 aaKnown RBP38.48■■■■□ 3.75
FMR1-216ENST00000616614 HUNKP57058 714 aa38.48■■■■□ 3.75
FMR1-216ENST00000616614 FKBP1BP68106 108 aa38.48■■■■□ 3.75
FMR1-216ENST00000616614 ZSCAN25Q6NSZ9 544 aa38.48■■■■□ 3.75
FMR1-216ENST00000616614 DDTLA6NHG4 134 aaPredicted RBP38.47■■■■□ 3.75
FMR1-216ENST00000616614 TTLL12Q14166 644 aaPredicted RBP38.47■■■■□ 3.75
FMR1-216ENST00000616614 RNF113AO15541 343 aaKnown RBP38.46■■■■□ 3.75
FMR1-216ENST00000616614 USP2O75604 605 aaPredicted RBP38.46■■■■□ 3.75
FMR1-216ENST00000616614 DEFB115Q30KQ5 88 aa38.46■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms