RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
CDH5-208ENST00000614547 MAP2P11137 1827 aaKnown RBP13.44□□□□□ -0.26
CDH5-208ENST00000614547 RNF113AO15541 343 aaKnown RBP13.44□□□□□ -0.26
CDH5-208ENST00000614547 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 HDXQ7Z353 690 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 SMYD4Q8IYR2 804 aaPredicted RBP13.44□□□□□ -0.26
CDH5-208ENST00000614547 SLC12A7Q9Y666 1083 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 KIAA1210Q9ULL0 1709 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 GOLGA6L9A6NEM1 432 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 MINDY4BA8MYZ0 360 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 CDKL5O76039 1030 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 NBPF11Q86T75 865 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 ANKRD24Q8TF21 1146 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 SLF1Q9BQI6 1058 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 SAMSN1Q9NSI8 373 aaKnown RBP13.44□□□□□ -0.26
CDH5-208ENST00000614547 SERTAD1Q9UHV2 236 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 AKR1B15C9JRZ8 316 aaPredicted RBP13.44□□□□□ -0.26
CDH5-208ENST00000614547 ZBTB43O43298 467 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 TFRCP02786 760 aaKnown RBP13.44□□□□□ -0.26
CDH5-208ENST00000614547 GPTP24298 496 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 SETQ01105 290 aaPredicted RBP13.44□□□□□ -0.26
CDH5-208ENST00000614547 PI16Q6UXB8 463 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 PSMB7Q99436 277 aa13.44□□□□□ -0.26
CDH5-208ENST00000614547 A0A1B0GUL7 405 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 NEURL1BA8MQ27 555 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 TADA3O75528 432 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 CASP1P29466 404 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 MRPS25P82663 173 aaKnown RBP13.43□□□□□ -0.26
CDH5-208ENST00000614547 METTL24Q5JXM2 366 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 FBXO18Q8NFZ0 1043 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 RTEL1Q9NZ71 1219 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 ARHGAP31Q2M1Z3 1444 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 CTDNEP1O95476 244 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 TDO2P48775 406 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 ENOX2Q16206 610 aaKnown RBP13.43□□□□□ -0.26
CDH5-208ENST00000614547 AIDAQ96BJ3 306 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
CDH5-208ENST00000614547 OSBPL5Q9H0X9 879 aaPredicted RBP13.43□□□□□ -0.26
CDH5-208ENST00000614547 JADE2Q9NQC1 790 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 ENC1O14682 589 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
CDH5-208ENST00000614547 SSRP1Q08945 709 aaKnown RBP13.43□□□□□ -0.26
CDH5-208ENST00000614547 SLC4A8Q2Y0W8 1093 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 LRRC24Q50LG9 513 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 SPECC1LQ69YQ0 1117 aa13.43□□□□□ -0.26
CDH5-208ENST00000614547 REREQ9P2R6 1566 aa13.42□□□□□ -0.26
CDH5-208ENST00000614547 CCDC148Q8NFR7 591 aa13.42□□□□□ -0.26
CDH5-208ENST00000614547 LCMT1Q9UIC8 334 aa13.42□□□□□ -0.26
CDH5-208ENST00000614547 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
CDH5-208ENST00000614547 SLC9C2Q5TAH2 1124 aa13.42□□□□□ -0.26
CDH5-208ENST00000614547 BRAPQ7Z569 592 aa13.42□□□□□ -0.26
CDH5-208ENST00000614547 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
CDH5-208ENST00000614547 PLEKHG3A1L390 1219 aa13.42□□□□□ -0.26
CDH5-208ENST00000614547 N4BP1O75113 896 aaKnown RBP13.42□□□□□ -0.26
CDH5-208ENST00000614547 H2AFXP16104 143 aaPredicted RBP13.42□□□□□ -0.26
CDH5-208ENST00000614547 TATP17735 454 aaPredicted RBP13.42□□□□□ -0.26
CDH5-208ENST00000614547 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
CDH5-208ENST00000614547 HELBQ8NG08 1087 aaPredicted RBP13.42□□□□□ -0.26
CDH5-208ENST00000614547 PLIN2Q99541 437 aa13.42□□□□□ -0.26
CDH5-208ENST00000614547 GBP3Q9H0R5 595 aa13.42□□□□□ -0.26
CDH5-208ENST00000614547 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
CDH5-208ENST00000614547 ZNF335Q9H4Z2 1342 aaPredicted RBP13.41□□□□□ -0.26
CDH5-208ENST00000614547 KIF28PB7ZC32 967 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 YEATS4O95619 227 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 IVLP07476 585 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 ACRBPQ8NEB7 543 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 ZNF496Q96IT1 587 aaPredicted RBP13.41□□□□□ -0.26
CDH5-208ENST00000614547 NAPBQ9H115 298 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 ABCB6Q9NP58 842 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 IQSEC3Q9UPP2 1182 aaPredicted RBP13.41□□□□□ -0.26
CDH5-208ENST00000614547 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 ALKQ9UM73 1620 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 ATP2C2O75185 946 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 SASH3O75995 380 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 IGKV5-2P06315 115 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 ERCC3P19447 782 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 RNF187Q5TA31 235 aaPredicted RBP13.41□□□□□ -0.26
CDH5-208ENST00000614547 CEP112Q8N8E3 955 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 PUS3Q9BZE2 481 aaKnown RBP13.41□□□□□ -0.26
CDH5-208ENST00000614547 FGAP02671 866 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 CMA1P23946 247 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 LIG3P49916 1009 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 SF3A3Q12874 501 aaKnown RBP eCLIP13.41□□□□□ -0.26
CDH5-208ENST00000614547 AMOTQ4VCS5 1084 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 RRAGBQ5VZM2 374 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 SLC35F6Q8N357 371 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.41□□□□□ -0.26
CDH5-208ENST00000614547 CABP5Q9NP86 173 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
CDH5-208ENST00000614547 PHLPP2Q6ZVD8 1323 aa13.4□□□□□ -0.26
CDH5-208ENST00000614547 BTBD18B2RXH4 712 aa13.4□□□□□ -0.26
CDH5-208ENST00000614547 ZEB2O60315 1214 aa13.4□□□□□ -0.26
CDH5-208ENST00000614547 TXLNAP40222 546 aa13.4□□□□□ -0.26
CDH5-208ENST00000614547 KRI1Q8N9T8 703 aaKnown RBP13.4□□□□□ -0.26
CDH5-208ENST00000614547 M0R2C6 588 aa13.4□□□□□ -0.26
CDH5-208ENST00000614547 ACTN2P35609 894 aa13.4□□□□□ -0.26
CDH5-208ENST00000614547 ATL3Q6DD88 541 aa13.4□□□□□ -0.26
CDH5-208ENST00000614547 VSTM4Q8IW00 320 aa13.4□□□□□ -0.26
CDH5-208ENST00000614547 ENGASEQ8NFI3 743 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms