RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 PSDA5PKW4 1024 aaPredicted RBP13□□□□□ -0.33
ATF3-211ENST00000613954 USP27XA6NNY8 438 aa13□□□□□ -0.33
ATF3-211ENST00000613954 CCP110O43303 1012 aa13□□□□□ -0.33
ATF3-211ENST00000613954 ZPR1O75312 459 aa13□□□□□ -0.33
ATF3-211ENST00000613954 ME1P48163 572 aa13□□□□□ -0.33
ATF3-211ENST00000613954 KMT5BQ4FZB7 885 aa13□□□□□ -0.33
ATF3-211ENST00000613954 CCDC152Q4G0S7 254 aa13□□□□□ -0.33
ATF3-211ENST00000613954 METTL24Q5JXM2 366 aa13□□□□□ -0.33
ATF3-211ENST00000613954 ADALQ6DHV7 355 aa13□□□□□ -0.33
ATF3-211ENST00000613954 DSCC1Q9BVC3 393 aa13□□□□□ -0.33
ATF3-211ENST00000613954 CNNM1Q9NRU3 951 aa13□□□□□ -0.33
ATF3-211ENST00000613954 HELLSQ9NRZ9 838 aa13□□□□□ -0.33
ATF3-211ENST00000613954 FAM53CQ9NYF3 392 aa13□□□□□ -0.33
ATF3-211ENST00000613954 SALL1Q9NSC2 1324 aa13□□□□□ -0.33
ATF3-211ENST00000613954 CCDC66A2RUB6 948 aa13□□□□□ -0.33
ATF3-211ENST00000613954 SLFN14P0C7P3 912 aa13□□□□□ -0.33
ATF3-211ENST00000613954 NAA30Q147X3 362 aaPredicted RBP13□□□□□ -0.33
ATF3-211ENST00000613954 AOPEPQ8N6M6 819 aa13□□□□□ -0.33
ATF3-211ENST00000613954 ZNF274Q96GC6 653 aaPredicted RBP13□□□□□ -0.33
ATF3-211ENST00000613954 ARID5BQ14865 1188 aa12.99□□□□□ -0.33
ATF3-211ENST00000613954 TERF2Q15554 542 aa12.99□□□□□ -0.33
ATF3-211ENST00000613954 KBTBD3Q8NAB2 608 aa12.99□□□□□ -0.33
ATF3-211ENST00000613954 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.99□□□□□ -0.33
ATF3-211ENST00000613954 EDC3Q96F86 508 aaKnown RBP12.99□□□□□ -0.33
ATF3-211ENST00000613954 DNAJC2Q99543 621 aaKnown RBP12.99□□□□□ -0.33
ATF3-211ENST00000613954 SDF4Q9BRK5 362 aa12.99□□□□□ -0.33
ATF3-211ENST00000613954 L2HGDHQ9H9P8 463 aa12.99□□□□□ -0.33
ATF3-211ENST00000613954 RTEL1Q9NZ71 1219 aa12.99□□□□□ -0.33
ATF3-211ENST00000613954 CTDNEP1O95476 244 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 EXOSC10Q01780 885 aaKnown RBP12.98□□□□□ -0.33
ATF3-211ENST00000613954 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 TBC1D9BQ66K14 1250 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 SMIM5Q71RC9 77 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 FMR1NBQ8N0W7 255 aaPredicted RBP12.98□□□□□ -0.33
ATF3-211ENST00000613954 SRP68Q9UHB9 627 aaKnown RBP12.98□□□□□ -0.33
ATF3-211ENST00000613954 MROH5Q6ZUA9 1318 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 GORABQ5T7V8 394 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 VGLL2Q8N8G2 317 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
ATF3-211ENST00000613954 XAGE2Q96GT9 111 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 NYXQ9GZU5 481 aa12.98□□□□□ -0.33
ATF3-211ENST00000613954 TRMT1Q9NXH9 659 aaKnown RBP12.98□□□□□ -0.33
ATF3-211ENST00000613954 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 IFIT1P09914 478 aaKnown RBP12.97□□□□□ -0.33
ATF3-211ENST00000613954 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
ATF3-211ENST00000613954 APOBRQ0VD83 1088 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 BMS1Q14692 1282 aaKnown RBP12.97□□□□□ -0.33
ATF3-211ENST00000613954 ELF2Q15723 593 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 ERFEQ4G0M1 354 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 TTC39AQ5SRH9 613 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 FBXO38Q6PIJ6 1188 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 CCDC129Q6ZRS4 1044 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 STOX1Q6ZVD7 989 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 SETDB2Q96T68 719 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 KIAA1468Q9P260 1216 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 SPEF2Q9C093 1822 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 COL24A1Q17RW2 1714 aa12.97□□□□□ -0.33
ATF3-211ENST00000613954 YEATS4O95619 227 aa12.96□□□□□ -0.33
ATF3-211ENST00000613954 ADORA1P30542 326 aa12.96□□□□□ -0.33
ATF3-211ENST00000613954 NBPF11Q86T75 865 aa12.96□□□□□ -0.33
ATF3-211ENST00000613954 RGS22Q8NE09 1264 aa12.96□□□□□ -0.33
ATF3-211ENST00000613954 SEC62Q99442 399 aaKnown RBP12.96□□□□□ -0.33
ATF3-211ENST00000613954 LRRC2Q9BYS8 371 aa12.96□□□□□ -0.33
ATF3-211ENST00000613954 PAG1Q9NWQ8 432 aa12.96□□□□□ -0.33
ATF3-211ENST00000613954 PCDHA7Q9UN72 937 aa12.96□□□□□ -0.33
ATF3-211ENST00000613954 CARMIL3Q8ND23 1372 aa12.96□□□□□ -0.33
ATF3-211ENST00000613954 TRIM37O94972 964 aa12.96□□□□□ -0.34
ATF3-211ENST00000613954 PDE8BO95263 885 aa12.96□□□□□ -0.34
ATF3-211ENST00000613954 HMGB2P26583 209 aaKnown RBP12.96□□□□□ -0.34
ATF3-211ENST00000613954 RFC4P35249 363 aa12.96□□□□□ -0.34
ATF3-211ENST00000613954 SF3A1Q15459 793 aaKnown RBP12.96□□□□□ -0.34
ATF3-211ENST00000613954 SLC10A5Q5PT55 438 aa12.96□□□□□ -0.34
ATF3-211ENST00000613954 AMIGO3Q86WK7 504 aa12.96□□□□□ -0.34
ATF3-211ENST00000613954 PPP1R13BQ96KQ4 1090 aa12.96□□□□□ -0.34
ATF3-211ENST00000613954 MPHOSPH8Q99549 860 aa12.96□□□□□ -0.34
ATF3-211ENST00000613954 FTOQ9C0B1 505 aaKnown RBP eCLIP12.96□□□□□ -0.34
ATF3-211ENST00000613954 SEC31BQ9NQW1 1179 aa12.96□□□□□ -0.34
ATF3-211ENST00000613954 NDUFB9Q9Y6M9 179 aa12.96□□□□□ -0.34
ATF3-211ENST00000613954 GOLIM4O00461 696 aa12.95□□□□□ -0.34
ATF3-211ENST00000613954 DHX16O60231 1041 aaKnown RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 IGSF3O75054 1194 aa12.95□□□□□ -0.34
ATF3-211ENST00000613954 C4AP0C0L4 1744 aa12.95□□□□□ -0.34
ATF3-211ENST00000613954 GTF2E1P29083 439 aaPredicted RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 PDIA3P30101 505 aaKnown RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 IGHMBP2P38935 993 aaKnown RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 STK38Q15208 465 aa12.95□□□□□ -0.34
ATF3-211ENST00000613954 SF3B3Q15393 1217 aaKnown RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 E4F1Q66K89 784 aaPredicted RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 POLR3EQ9NVU0 708 aa12.95□□□□□ -0.34
ATF3-211ENST00000613954 E7EWF7 191 aa12.95□□□□□ -0.34
ATF3-211ENST00000613954 SMC2O95347 1197 aa12.95□□□□□ -0.34
ATF3-211ENST00000613954 H2AFXP16104 143 aaPredicted RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 EVCP57679 992 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms