RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 PHLPP1O60346 1717 aa23.06■■□□□ 1.28
SMARCD2-212ENST00000613943 TDO2P48775 406 aa23.05■■□□□ 1.28
SMARCD2-212ENST00000613943 LINC00301Q8NCQ3 95 aa23.05■■□□□ 1.28
SMARCD2-212ENST00000613943 ENGASEQ8NFI3 743 aa23.05■■□□□ 1.28
SMARCD2-212ENST00000613943 SDR42E1Q8WUS8 393 aa23.05■■□□□ 1.28
SMARCD2-212ENST00000613943 MYH15Q9Y2K3 1946 aa23.05■■□□□ 1.28
SMARCD2-212ENST00000613943 KIF23Q02241 960 aaPredicted RBP23.05■■□□□ 1.28
SMARCD2-212ENST00000613943 MYSM1Q5VVJ2 828 aa23.05■■□□□ 1.28
SMARCD2-212ENST00000613943 ALG1Q9BT22 464 aa23.05■■□□□ 1.28
SMARCD2-212ENST00000613943 STK38Q15208 465 aa23.04■■□□□ 1.28
SMARCD2-212ENST00000613943 C8orf37Q96NL8 207 aa23.04■■□□□ 1.28
SMARCD2-212ENST00000613943 RTEL1Q9NZ71 1219 aa23.04■■□□□ 1.28
SMARCD2-212ENST00000613943 WDR19Q8NEZ3 1342 aa23.04■■□□□ 1.28
SMARCD2-212ENST00000613943 IFIT3O14879 490 aaKnown RBP23.04■■□□□ 1.28
SMARCD2-212ENST00000613943 RANBP6O60518 1105 aaKnown RBP23.04■■□□□ 1.28
SMARCD2-212ENST00000613943 KINO60870 393 aaKnown RBP23.04■■□□□ 1.28
SMARCD2-212ENST00000613943 NDUFA8P51970 172 aa23.04■■□□□ 1.28
SMARCD2-212ENST00000613943 SF3A1Q15459 793 aaKnown RBP23.04■■□□□ 1.28
SMARCD2-212ENST00000613943 TAF1P21675 1872 aa23.03■■□□□ 1.28
SMARCD2-212ENST00000613943 FAM160A1Q05DH4 1040 aa23.03■■□□□ 1.28
SMARCD2-212ENST00000613943 BARGINQ6ZT62 677 aa23.03■■□□□ 1.28
SMARCD2-212ENST00000613943 FAM217BQ9NTX9 383 aaPredicted RBP23.03■■□□□ 1.28
SMARCD2-212ENST00000613943 ZBTB43O43298 467 aa23.03■■□□□ 1.28
SMARCD2-212ENST00000613943 CMTR1Q8N1G2 835 aaKnown RBP23.03■■□□□ 1.28
SMARCD2-212ENST00000613943 CCDC82Q8N4S0 544 aa23.03■■□□□ 1.28
SMARCD2-212ENST00000613943 GOLGA8AA7E2F4 631 aa23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 MARCKSP29966 332 aaPredicted RBP23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 TBC1D9BQ66K14 1250 aa23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 CELF1Q92879 486 aaKnown RBP23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 CHMP4CQ96CF2 233 aa23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 SRP68Q9UHB9 627 aaKnown RBP23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 NRBP1Q9UHY1 535 aa23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 PYCARDQ9ULZ3 195 aa23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 ARAP2Q8WZ64 1704 aa23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 CYP7A1P22680 504 aa23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 KLRK1P26718 216 aa23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 TRIM5Q9C035 493 aa23.02■■□□□ 1.28
SMARCD2-212ENST00000613943 C4AP0C0L4 1744 aa23.01■■□□□ 1.27
SMARCD2-212ENST00000613943 C4BP0C0L5 1744 aa23.01■■□□□ 1.27
SMARCD2-212ENST00000613943 PTGS1P23219 599 aa23.01■■□□□ 1.27
SMARCD2-212ENST00000613943 GTF2E1P29083 439 aaPredicted RBP23.01■■□□□ 1.27
SMARCD2-212ENST00000613943 AKNAD1Q5T1N1 836 aa23.01■■□□□ 1.27
SMARCD2-212ENST00000613943 ATL3Q6DD88 541 aa23.01■■□□□ 1.27
SMARCD2-212ENST00000613943 ANKRD18AQ8IVF6 992 aa23.01■■□□□ 1.27
SMARCD2-212ENST00000613943 MRPS27Q92552 414 aaKnown RBP23.01■■□□□ 1.27
SMARCD2-212ENST00000613943 RAI14Q9P0K7 980 aa23.01■■□□□ 1.27
SMARCD2-212ENST00000613943 ALX1Q15699 326 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 NTRK3Q16288 839 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 KRT40Q6A162 431 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 MFSD6Q6ZSS7 791 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 VPS37DQ86XT2 251 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 FMR1NBQ8N0W7 255 aaPredicted RBP23■■□□□ 1.27
SMARCD2-212ENST00000613943 KLHL34Q8N239 644 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 SMARCC1Q92922 1105 aaPredicted RBP23■■□□□ 1.27
SMARCD2-212ENST00000613943 TMEM87BQ96K49 555 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 CDC5LQ99459 802 aaKnown RBP23■■□□□ 1.27
SMARCD2-212ENST00000613943 BCL9LQ86UU0 1499 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 LTBP4Q8N2S1 1624 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 COL1A1P02452 1464 aaPredicted RBP23■■□□□ 1.27
SMARCD2-212ENST00000613943 SPTLC2O15270 562 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 ADALQ6DHV7 355 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 PIBF1Q8WXW3 757 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 SLC12A7Q9Y666 1083 aa23■■□□□ 1.27
SMARCD2-212ENST00000613943 MINDY4BA8MYZ0 360 aa22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 GUCY1A2P33402 732 aa22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 DNTTIP2Q5QJE6 756 aaKnown RBP22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 SYNE3Q6ZMZ3 975 aa22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 SLC51AQ86UW1 340 aa22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 TDRD7Q8NHU6 1098 aaKnown RBP22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 SLC26A6Q9BXS9 759 aa22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 NOLC1Q14978 699 aaKnown RBP eCLIP22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 AMIGO3Q86WK7 504 aa22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 DRC7Q8IY82 874 aa22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 BCL2L12Q9HB09 334 aa22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 POLR3EQ9NVU0 708 aa22.99■■□□□ 1.27
SMARCD2-212ENST00000613943 RTL9Q8NET4 1388 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 CYP2D7A0A087X1C5 515 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 CCDC69A6NI79 296 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 WDHD1O75717 1129 aaPredicted RBP22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 IQCB1Q15051 598 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 ANO1Q5XXA6 986 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 NGLY1Q96IV0 654 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 SDF4Q9BRK5 362 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 MINPP1Q9UNW1 487 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 IARSP41252 1262 aaKnown RBP22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 DYNLL1P63167 89 aaKnown RBP22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 BRAPQ7Z569 592 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 SGMS1Q86VZ5 419 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 MROH7-TTC4A0A0A0MT08 1334 aa22.98■■□□□ 1.27
SMARCD2-212ENST00000613943 ZNF75DP51815 510 aa22.97■■□□□ 1.27
SMARCD2-212ENST00000613943 GNL2Q13823 731 aaKnown RBP22.97■■□□□ 1.27
SMARCD2-212ENST00000613943 JAG2Q9Y219 1238 aa22.97■■□□□ 1.27
SMARCD2-212ENST00000613943 RREB1Q92766 1687 aa22.97■■□□□ 1.27
SMARCD2-212ENST00000613943 LRMPQ12912 555 aa22.97■■□□□ 1.27
SMARCD2-212ENST00000613943 STX1AQ16623 288 aa22.97■■□□□ 1.27
SMARCD2-212ENST00000613943 CCDC186Q7Z3E2 898 aa22.97■■□□□ 1.27
SMARCD2-212ENST00000613943 KCNG4Q8TDN1 519 aa22.97■■□□□ 1.27
SMARCD2-212ENST00000613943 NACAP1Q9BZK3 213 aa22.97■■□□□ 1.27
SMARCD2-212ENST00000613943 DOCK2Q92608 1830 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms