RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ITGBL1O95965 494 aaPredicted RBP16.06■□□□□ 0.16
MDC1-209ENST00000613547 BTDP43251 543 aa16.06■□□□□ 0.16
MDC1-209ENST00000613547 PLEKHM2Q8IWE5 1019 aa16.06■□□□□ 0.16
MDC1-209ENST00000613547 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
MDC1-209ENST00000613547 PPP2R3BQ9Y5P8 575 aa16.06■□□□□ 0.16
MDC1-209ENST00000613547 GPR75-ASB3A0A0A6YYF3 556 aa16.05■□□□□ 0.16
MDC1-209ENST00000613547 ADM5C9JUS6 153 aa16.05■□□□□ 0.16
MDC1-209ENST00000613547 PLCG2P16885 1265 aa16.05■□□□□ 0.16
MDC1-209ENST00000613547 FKBP1CQ5VVH2 108 aa16.05■□□□□ 0.16
MDC1-209ENST00000613547 KBTBD3Q8NAB2 608 aa16.05■□□□□ 0.16
MDC1-209ENST00000613547 ZNF384Q8TF68 577 aa16.05■□□□□ 0.16
MDC1-209ENST00000613547 OSBPL3Q9H4L5 887 aa16.05■□□□□ 0.16
MDC1-209ENST00000613547 USP40Q9NVE5 1235 aa16.05■□□□□ 0.16
MDC1-209ENST00000613547 AKAP11Q9UKA4 1901 aa16.04■□□□□ 0.16
MDC1-209ENST00000613547 PDE6AP16499 860 aa16.04■□□□□ 0.16
MDC1-209ENST00000613547 NF2P35240 595 aa16.04■□□□□ 0.16
MDC1-209ENST00000613547 CDC42EP5Q6NZY7 148 aa16.04■□□□□ 0.16
MDC1-209ENST00000613547 DEFB129Q9H1M3 183 aa16.04■□□□□ 0.16
MDC1-209ENST00000613547 PASKQ96RG2 1323 aa16.03■□□□□ 0.16
MDC1-209ENST00000613547 ZNF532Q9HCE3 1301 aa16.03■□□□□ 0.16
MDC1-209ENST00000613547 TCP10L2B9ZVM9 353 aa16.03■□□□□ 0.16
MDC1-209ENST00000613547 TRAF5O00463 557 aa16.03■□□□□ 0.16
MDC1-209ENST00000613547 ZFYP08048 801 aaPredicted RBP16.03■□□□□ 0.16
MDC1-209ENST00000613547 RASA3Q14644 834 aa16.03■□□□□ 0.16
MDC1-209ENST00000613547 EVI5LQ96CN4 794 aa16.03■□□□□ 0.16
MDC1-209ENST00000613547 FSD1Q9BTV5 496 aa16.03■□□□□ 0.16
MDC1-209ENST00000613547 MAST2Q6P0Q8 1798 aa16.03■□□□□ 0.16
MDC1-209ENST00000613547 TRIM6-TRIM34B2RNG4 842 aa16.02■□□□□ 0.16
MDC1-209ENST00000613547 PDE4AP27815 886 aa16.02■□□□□ 0.16
MDC1-209ENST00000613547 ADD2P35612 726 aa16.02■□□□□ 0.16
MDC1-209ENST00000613547 CACNB3P54284 484 aa16.02■□□□□ 0.16
MDC1-209ENST00000613547 PPP4CP60510 307 aa16.02■□□□□ 0.16
MDC1-209ENST00000613547 UBE3CQ15386 1083 aa16.02■□□□□ 0.16
MDC1-209ENST00000613547 FAM83AQ86UY5 434 aa16.02■□□□□ 0.16
MDC1-209ENST00000613547 CDCA5Q96FF9 252 aa16.02■□□□□ 0.16
MDC1-209ENST00000613547 ZNF408Q9H9D4 720 aa16.02■□□□□ 0.16
MDC1-209ENST00000613547 AATFQ9NY61 560 aaKnown RBP eCLIP16.02■□□□□ 0.16
MDC1-209ENST00000613547 MAGEB6P1A0A0J9YX57 407 aa16.01■□□□□ 0.15
MDC1-209ENST00000613547 APLP1P51693 650 aa16.01■□□□□ 0.15
MDC1-209ENST00000613547 SUPT20HL1Q3ZLR7 823 aa16.01■□□□□ 0.15
MDC1-209ENST00000613547 ADGRA1Q86SQ6 560 aa16.01■□□□□ 0.15
MDC1-209ENST00000613547 TEX11Q8IYF3 940 aa16.01■□□□□ 0.15
MDC1-209ENST00000613547 MIGA1Q8NAN2 632 aa16.01■□□□□ 0.15
MDC1-209ENST00000613547 HOOK2Q96ED9 719 aa16.01■□□□□ 0.15
MDC1-209ENST00000613547 IDI2Q9BXS1 227 aa16.01■□□□□ 0.15
MDC1-209ENST00000613547 SCAF8Q9UPN6 1271 aaKnown RBP16.01■□□□□ 0.15
MDC1-209ENST00000613547 TCRBV5S4A2TA0A5A2 114 aa16■□□□□ 0.15
MDC1-209ENST00000613547 TMEM88BA6NKF7 163 aa16■□□□□ 0.15
MDC1-209ENST00000613547 RNF113AO15541 343 aaKnown RBP16■□□□□ 0.15
MDC1-209ENST00000613547 ENTPD3O75355 529 aa16■□□□□ 0.15
MDC1-209ENST00000613547 CELF2O95319 508 aaKnown RBP16■□□□□ 0.15
MDC1-209ENST00000613547 HSPA6P17066 643 aa16■□□□□ 0.15
MDC1-209ENST00000613547 RHBDL3P58872 404 aa16■□□□□ 0.15
MDC1-209ENST00000613547 TICAM2Q86XR7 235 aa16■□□□□ 0.15
MDC1-209ENST00000613547 FAM151AQ8WW52 585 aa16■□□□□ 0.15
MDC1-209ENST00000613547 RILPL2Q969X0 211 aa16■□□□□ 0.15
MDC1-209ENST00000613547 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
MDC1-209ENST00000613547 RGS3P49796 1198 aa15.99■□□□□ 0.15
MDC1-209ENST00000613547 PICALMQ13492 652 aa15.99■□□□□ 0.15
MDC1-209ENST00000613547 C2orf69Q8N8R5 385 aa15.99■□□□□ 0.15
MDC1-209ENST00000613547 SH3RF3Q8TEJ3 882 aaPredicted RBP15.99■□□□□ 0.15
MDC1-209ENST00000613547 AIDAQ96BJ3 306 aa15.99■□□□□ 0.15
MDC1-209ENST00000613547 CRNKL1Q9BZJ0 848 aaKnown RBP15.99■□□□□ 0.15
MDC1-209ENST00000613547 DOCK2Q92608 1830 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 WDHD1O75717 1129 aaPredicted RBP15.98■□□□□ 0.15
MDC1-209ENST00000613547 DYNLL1P63167 89 aaKnown RBP15.98■□□□□ 0.15
MDC1-209ENST00000613547 FKBP1BP68106 108 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 FMR1Q06787 632 aaKnown RBP eCLIP15.98■□□□□ 0.153e-8■■□□□ 12.6
MDC1-209ENST00000613547 TCP10Q12799 353 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 NFIAQ12857 509 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 PRAMEF18Q5VWM3 479 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 DLK2Q6UY11 383 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 APPBP2Q92624 585 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 TMEM39BQ9GZU3 492 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 GBA2Q9HCG7 927 aaPredicted RBP15.98■□□□□ 0.15
MDC1-209ENST00000613547 CREBZFQ9NS37 354 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 CNTNAP1P78357 1384 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 RFX7Q2KHR2 1363 aa15.98■□□□□ 0.15
MDC1-209ENST00000613547 RPAP1Q9BWH6 1393 aaPredicted RBP15.98■□□□□ 0.15
MDC1-209ENST00000613547 PPP1R12BO60237 982 aaPredicted RBP15.97■□□□□ 0.15
MDC1-209ENST00000613547 USP5P45974 858 aa15.97■□□□□ 0.15
MDC1-209ENST00000613547 TTLL12Q14166 644 aaPredicted RBP15.97■□□□□ 0.15
MDC1-209ENST00000613547 TTC22Q5TAA0 569 aa15.97■□□□□ 0.15
MDC1-209ENST00000613547 ZSCAN29Q8IWY8 852 aaPredicted RBP15.97■□□□□ 0.15
MDC1-209ENST00000613547 RIOK1Q9BRS2 568 aaKnown RBP15.97■□□□□ 0.15
MDC1-209ENST00000613547 FAM198AQ9UFP1 575 aa15.97■□□□□ 0.15
MDC1-209ENST00000613547 MYH2Q9UKX2 1941 aa15.97■□□□□ 0.15
MDC1-209ENST00000613547 ECM29Q5VYK3 1845 aa15.96■□□□□ 0.15
MDC1-209ENST00000613547 HIP1O00291 1037 aa15.96■□□□□ 0.15
MDC1-209ENST00000613547 MBD4O95243 580 aa15.96■□□□□ 0.15
MDC1-209ENST00000613547 NBPF12Q5TAG4 269 aaPredicted RBP15.96■□□□□ 0.15
MDC1-209ENST00000613547 CST9Q5W186 159 aa15.96■□□□□ 0.15
MDC1-209ENST00000613547 ARMC9Q7Z3E5 817 aa15.96■□□□□ 0.15
MDC1-209ENST00000613547 TGFBRAP1Q8WUH2 860 aa15.96■□□□□ 0.15
MDC1-209ENST00000613547 DDRGK1Q96HY6 314 aa15.96■□□□□ 0.15
MDC1-209ENST00000613547 ARMT1Q9H993 441 aa15.96■□□□□ 0.15
MDC1-209ENST00000613547 ABT1Q9ULW3 272 aaKnown RBP15.96■□□□□ 0.15
MDC1-209ENST00000613547 DCAF15Q66K64 600 aa15.95■□□□□ 0.14
MDC1-209ENST00000613547 MAPKAPK5Q8IW41 473 aa15.95■□□□□ 0.14
MDC1-209ENST00000613547 LCORLQ8N3X6 602 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms