RNA–Protein interactions for RNA: ENST00000610404.4

TTR-204, Transcript of transthyretin, humanhuman

TSL 5 BASIC

Gene TTR, Length 1,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-204ENST00000610404 ECE2O60344 883 aa11.46□□□□□ -0.57
TTR-204ENST00000610404 FDX1P10109 184 aa11.46□□□□□ -0.57
TTR-204ENST00000610404 ZNF157P51786 506 aaPredicted RBP11.46□□□□□ -0.57
TTR-204ENST00000610404 RIPK4P57078 832 aa11.46□□□□□ -0.57
TTR-204ENST00000610404 DCPSQ96C86 337 aaKnown RBP11.46□□□□□ -0.57
TTR-204ENST00000610404 GGA3Q9NZ52 723 aa11.46□□□□□ -0.57
TTR-204ENST00000610404 SCN9AQ15858 1988 aa11.46□□□□□ -0.58
TTR-204ENST00000610404 C6orf229H3BNL8 230 aa11.45□□□□□ -0.58
TTR-204ENST00000610404 RPS12P25398 132 aaKnown RBP11.45□□□□□ -0.58
TTR-204ENST00000610404 SF3B3Q15393 1217 aaKnown RBP11.45□□□□□ -0.58
TTR-204ENST00000610404 KIF4BQ2VIQ3 1234 aa11.45□□□□□ -0.58
TTR-204ENST00000610404 FAM89AQ96GI7 184 aa11.45□□□□□ -0.58
TTR-204ENST00000610404 TRIM47Q96LD4 638 aa11.45□□□□□ -0.58
TTR-204ENST00000610404 CSRNP1Q96S65 589 aa11.45□□□□□ -0.58
TTR-204ENST00000610404 ISCA1Q9BUE6 129 aa11.45□□□□□ -0.58
TTR-204ENST00000610404 BABAM1Q9NWV8 329 aa11.45□□□□□ -0.58
TTR-204ENST00000610404 CHPF2Q9P2E5 772 aa11.45□□□□□ -0.58
TTR-204ENST00000610404 ATP5J2-PTCD1G3V325 749 aa11.44□□□□□ -0.58
TTR-204ENST00000610404 SSTR3P32745 418 aaPredicted RBP11.44□□□□□ -0.58
TTR-204ENST00000610404 TMPOP42166 694 aaKnown RBP11.44□□□□□ -0.58
TTR-204ENST00000610404 RTL5Q5HYW3 569 aaPredicted RBP11.44□□□□□ -0.58
TTR-204ENST00000610404 TBC1D16Q8TBP0 767 aa11.44□□□□□ -0.58
TTR-204ENST00000610404 CDCA5Q96FF9 252 aa11.44□□□□□ -0.58
TTR-204ENST00000610404 PNNQ9H307 717 aaKnown RBP11.44□□□□□ -0.58
TTR-204ENST00000610404 AKAP11Q9UKA4 1901 aa11.43□□□□□ -0.58
TTR-204ENST00000610404 ALDH1A1P00352 501 aa11.43□□□□□ -0.58
TTR-204ENST00000610404 VIL1P09327 827 aaKnown RBP11.43□□□□□ -0.58
TTR-204ENST00000610404 NFX1Q12986 1120 aaKnown RBP11.43□□□□□ -0.58
TTR-204ENST00000610404 PTCRAQ6ISU1 281 aaPredicted RBP11.43□□□□□ -0.58
TTR-204ENST00000610404 CTU1Q7Z7A3 348 aaKnown RBP11.43□□□□□ -0.58
TTR-204ENST00000610404 RASAL3Q86YV0 1011 aa11.43□□□□□ -0.58
TTR-204ENST00000610404 PLBD2Q8NHP8 589 aa11.43□□□□□ -0.58
TTR-204ENST00000610404 KIFC2Q96AC6 838 aa11.43□□□□□ -0.58
TTR-204ENST00000610404 EYA3Q99504 573 aa11.43□□□□□ -0.58
TTR-204ENST00000610404 PCDHGC3Q9UN70 934 aa11.43□□□□□ -0.58
TTR-204ENST00000610404 CHL1O00533 1208 aa11.42□□□□□ -0.58
TTR-204ENST00000610404 ANGEL2Q5VTE6 544 aaKnown RBP11.42□□□□□ -0.58
TTR-204ENST00000610404 IRS4O14654 1257 aaPredicted RBP11.41□□□□□ -0.58
TTR-204ENST00000610404 MS4A1P11836 297 aa11.41□□□□□ -0.58
TTR-204ENST00000610404 SNRPBP14678 240 aaKnown RBP11.41□□□□□ -0.58
TTR-204ENST00000610404 ZNF280AP59817 542 aaPredicted RBP11.41□□□□□ -0.58
TTR-204ENST00000610404 RPS8P62241 208 aaKnown RBP11.41□□□□□ -0.58
TTR-204ENST00000610404 LMOD3Q0VAK6 560 aa11.41□□□□□ -0.58
TTR-204ENST00000610404 HDGFL1Q5TGJ6 251 aa11.41□□□□□ -0.58
TTR-204ENST00000610404 MOB2Q70IA6 237 aa11.41□□□□□ -0.58
TTR-204ENST00000610404 EHBP1Q8NDI1 1231 aa11.41□□□□□ -0.58
TTR-204ENST00000610404 SEC31BQ9NQW1 1179 aa11.41□□□□□ -0.58
TTR-204ENST00000610404 SCAF8Q9UPN6 1271 aaKnown RBP11.41□□□□□ -0.58
TTR-204ENST00000610404 UFL1O94874 794 aa11.4□□□□□ -0.58
TTR-204ENST00000610404 CCNYL3P0C7X3 344 aa11.4□□□□□ -0.58
TTR-204ENST00000610404 SCARF1Q14162 830 aa11.4□□□□□ -0.58
TTR-204ENST00000610404 PRPF38BQ5VTL8 546 aaKnown RBP11.4□□□□□ -0.58
TTR-204ENST00000610404 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.58
TTR-204ENST00000610404 ZC3H12CQ9C0D7 883 aaKnown RBP11.4□□□□□ -0.58
TTR-204ENST00000610404 PODXL2Q9NZ53 605 aa11.4□□□□□ -0.58
TTR-204ENST00000610404 LAS1LQ9Y4W2 734 aaKnown RBP11.4□□□□□ -0.58
TTR-204ENST00000610404 PAPPA2Q9BXP8 1791 aa11.4□□□□□ -0.58
TTR-204ENST00000610404 ZNF609O15014 1411 aa11.4□□□□□ -0.58
TTR-204ENST00000610404 SIAH2O43255 324 aa11.39□□□□□ -0.59
TTR-204ENST00000610404 TRIM28Q13263 835 aaKnown RBP11.39□□□□□ -0.59
TTR-204ENST00000610404 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
TTR-204ENST00000610404 RSBN1LQ6PCB5 846 aaPredicted RBP11.39□□□□□ -0.59
TTR-204ENST00000610404 CCDC146Q8IYE0 955 aa11.39□□□□□ -0.59
TTR-204ENST00000610404 GMLQ99445 158 aa11.39□□□□□ -0.59
TTR-204ENST00000610404 PSME4Q14997 1843 aa11.38□□□□□ -0.59
TTR-204ENST00000610404 TBC1D8O95759 1140 aa11.38□□□□□ -0.59
TTR-204ENST00000610404 FKBP1BP68106 108 aa11.38□□□□□ -0.59
TTR-204ENST00000610404 PTPRNQ16849 979 aa11.38□□□□□ -0.59
TTR-204ENST00000610404 PRAMEF18Q5VWM3 479 aa11.38□□□□□ -0.59
TTR-204ENST00000610404 AGBL3Q8NEM8 1001 aa11.38□□□□□ -0.59
TTR-204ENST00000610404 ZNF296Q8WUU4 475 aaPredicted RBP11.38□□□□□ -0.59
TTR-204ENST00000610404 ANKIB1Q9P2G1 1089 aa11.38□□□□□ -0.59
TTR-204ENST00000610404 DBF4Q9UBU7 674 aaPredicted RBP11.38□□□□□ -0.59
TTR-204ENST00000610404 GGA1Q9UJY5 639 aa11.38□□□□□ -0.59
TTR-204ENST00000610404 WTIPA6NIX2 430 aaPredicted RBP11.37□□□□□ -0.59
TTR-204ENST00000610404 UBE2Q2LH0YL09 131 aa11.37□□□□□ -0.59
TTR-204ENST00000610404 TERTO14746 1132 aaKnown RBP11.37□□□□□ -0.59
TTR-204ENST00000610404 HOXB7P09629 217 aa11.37□□□□□ -0.59
TTR-204ENST00000610404 USP17L8P0C7I0 530 aa11.37□□□□□ -0.59
TTR-204ENST00000610404 TTLL12Q14166 644 aaPredicted RBP11.37□□□□□ -0.59
TTR-204ENST00000610404 ZBTB38Q8NAP3 1195 aaPredicted RBP11.37□□□□□ -0.59
TTR-204ENST00000610404 JARID2Q92833 1246 aaPredicted RBP11.37□□□□□ -0.59
TTR-204ENST00000610404 CCDC85AQ96PX6 553 aaPredicted RBP11.37□□□□□ -0.59
TTR-204ENST00000610404 MYOZ2Q9NPC6 264 aa11.37□□□□□ -0.59
TTR-204ENST00000610404 EVA1BQ9NVM1 165 aa11.37□□□□□ -0.59
TTR-204ENST00000610404 HYPKQ9NX55 129 aa11.37□□□□□ -0.59
TTR-204ENST00000610404 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
TTR-204ENST00000610404 SPDYE5A6NIY4 337 aa11.36□□□□□ -0.59
TTR-204ENST00000610404 WIPF1O43516 503 aa11.36□□□□□ -0.59
TTR-204ENST00000610404 ZMYND10O75800 440 aa11.36□□□□□ -0.59
TTR-204ENST00000610404 AMHR2Q16671 573 aa11.36□□□□□ -0.59
TTR-204ENST00000610404 DUSP27Q5VZP5 1158 aa11.36□□□□□ -0.59
TTR-204ENST00000610404 HDAC9Q9UKV0 1011 aa11.36□□□□□ -0.59
TTR-204ENST00000610404 WASF2Q9Y6W5 498 aa11.36□□□□□ -0.59
TTR-204ENST00000610404 MOXD2PA6NHM9 499 aa11.35□□□□□ -0.59
TTR-204ENST00000610404 NDUFV2P19404 249 aa11.35□□□□□ -0.59
TTR-204ENST00000610404 SH3BP2P78314 561 aa11.35□□□□□ -0.59
TTR-204ENST00000610404 PKN2Q16513 984 aaKnown RBP11.35□□□□□ -0.59
TTR-204ENST00000610404 NBPF9Q3BBW0 867 aa11.35□□□□□ -0.59
TTR-204ENST00000610404 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms