RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 PLCL1Q15111 1095 aa7.37□□□□□ -1.23
SMCHD1-213ENST00000609587 NPAS4Q8IUM7 802 aa7.37□□□□□ -1.23
SMCHD1-213ENST00000609587 TMEM102Q8N9M5 508 aaPredicted RBP7.37□□□□□ -1.23
SMCHD1-213ENST00000609587 ALKBH8Q96BT7 664 aaKnown RBP7.37□□□□□ -1.23
SMCHD1-213ENST00000609587 DMRTB1Q96MA1 342 aa7.37□□□□□ -1.23
SMCHD1-213ENST00000609587 ADH5P11766 374 aa7.36□□□□□ -1.23
SMCHD1-213ENST00000609587 SPRED2Q7Z698 418 aa7.36□□□□□ -1.23
SMCHD1-213ENST00000609587 GPR182O15218 404 aa7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 PLCB3Q01970 1234 aa7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 SOX4Q06945 474 aaPredicted RBP7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 PEAR1Q5VY43 1037 aaPredicted RBP7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 GALNT12Q8IXK2 581 aa7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 BSNDQ8WZ55 320 aa7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 OSMRQ99650 979 aa7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 ZKSCAN3Q9BRR0 538 aa7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 YIPF2Q9BWQ6 316 aa7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 NRSN2Q9GZP1 204 aa7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 SOX17Q9H6I2 414 aaPredicted RBP7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 ACTL7BQ9Y614 415 aa7.35□□□□□ -1.23
SMCHD1-213ENST00000609587 TREHO43280 583 aa7.34□□□□□ -1.23
SMCHD1-213ENST00000609587 NXPE3Q969Y0 559 aa7.34□□□□□ -1.23
SMCHD1-213ENST00000609587 NIF3L1Q9GZT8 377 aa7.34□□□□□ -1.23
SMCHD1-213ENST00000609587 DNAJC25Q9H1X3 360 aa7.34□□□□□ -1.23
SMCHD1-213ENST00000609587 SLC5A6Q9Y289 635 aa7.34□□□□□ -1.23
SMCHD1-213ENST00000609587 BIN1O00499 593 aa7.33□□□□□ -1.24
SMCHD1-213ENST00000609587 CPNE3O75131 537 aaKnown RBP7.33□□□□□ -1.24
SMCHD1-213ENST00000609587 FARP2O94887 1054 aaPredicted RBP7.33□□□□□ -1.24
SMCHD1-213ENST00000609587 RAB6AP20340 208 aa7.33□□□□□ -1.24
SMCHD1-213ENST00000609587 DSC3Q14574 896 aa7.33□□□□□ -1.24
SMCHD1-213ENST00000609587 EXOSC6Q5RKV6 272 aaKnown RBP7.33□□□□□ -1.24
SMCHD1-213ENST00000609587 LCE5AQ5TCM9 118 aa7.33□□□□□ -1.24
SMCHD1-213ENST00000609587 DUSP27Q5VZP5 1158 aa7.33□□□□□ -1.24
SMCHD1-213ENST00000609587 BCL2L13Q9BXK5 485 aa7.33□□□□□ -1.24
SMCHD1-213ENST00000609587 SEMA6CQ9H3T2 930 aa7.33□□□□□ -1.24
SMCHD1-213ENST00000609587 POLR3DP05423 398 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-213ENST00000609587 NFICP08651 508 aa7.32□□□□□ -1.24
SMCHD1-213ENST00000609587 ESRRAP11474 423 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-213ENST00000609587 ORC1Q13415 861 aa7.32□□□□□ -1.24
SMCHD1-213ENST00000609587 PKN1Q16512 942 aa7.32□□□□□ -1.24
SMCHD1-213ENST00000609587 EAPPQ56P03 285 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-213ENST00000609587 GLIS3Q8NEA6 775 aa7.32□□□□□ -1.24
SMCHD1-213ENST00000609587 FAM168AQ92567 244 aa7.32□□□□□ -1.24
SMCHD1-213ENST00000609587 BHLHE41Q9C0J9 482 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-213ENST00000609587 LATS2Q9NRM7 1088 aa7.32□□□□□ -1.24
SMCHD1-213ENST00000609587 EIF1AYO14602 144 aaKnown RBP7.31□□□□□ -1.24
SMCHD1-213ENST00000609587 P4HBP07237 508 aaKnown RBP7.31□□□□□ -1.24
SMCHD1-213ENST00000609587 MAPK8P45983 427 aa7.31□□□□□ -1.24
SMCHD1-213ENST00000609587 CYP27A1Q02318 531 aa7.31□□□□□ -1.24
SMCHD1-213ENST00000609587 FMR1Q06787 632 aaKnown RBP eCLIP7.31□□□□□ -1.245e-13■■■■■ 127.2
SMCHD1-213ENST00000609587 USPL1Q5W0Q7 1092 aa7.31□□□□□ -1.24
SMCHD1-213ENST00000609587 ATG4DQ86TL0 474 aaPredicted RBP7.31□□□□□ -1.24
SMCHD1-213ENST00000609587 GIPC2Q8TF65 315 aa7.31□□□□□ -1.24
SMCHD1-213ENST00000609587 ADAMTS6Q9UKP5 1117 aa7.31□□□□□ -1.24
SMCHD1-213ENST00000609587 A0A1W2PP55 124 aa7.3□□□□□ -1.24
SMCHD1-213ENST00000609587 RBM47A0AV96 593 aaKnown RBP7.3□□□□□ -1.24
SMCHD1-213ENST00000609587 KIAA0319Q5VV43 1072 aa7.3□□□□□ -1.24
SMCHD1-213ENST00000609587 CILP2Q8IUL8 1156 aa7.3□□□□□ -1.24
SMCHD1-213ENST00000609587 STK11IPQ8N1F8 1099 aa7.3□□□□□ -1.24
SMCHD1-213ENST00000609587 CSRNP1Q96S65 589 aa7.3□□□□□ -1.24
SMCHD1-213ENST00000609587 FAM105AQ9NUU6 356 aa7.3□□□□□ -1.24
SMCHD1-213ENST00000609587 DYNC1LI2O43237 492 aaPredicted RBP7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 CTSBP07858 339 aa7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 RBM25P49756 843 aaKnown RBP7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 GSTM4Q03013 218 aa7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 MAP7Q14244 749 aa7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 ZNF326Q5BKZ1 582 aaKnown RBP7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 SEZ6L2Q6UXD5 910 aa7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 FBXO33Q7Z6M2 555 aa7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 NPM2Q86SE8 214 aaKnown RBP7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 CCNJLQ8IV13 435 aa7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 KSR1Q8IVT5 923 aa7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 CCDC74AQ96AQ1 378 aa7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 ACSS3Q9H6R3 686 aa7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 RC3H2Q9HBD1 1191 aaKnown RBP7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 C1GALT1Q9NS00 363 aa7.29□□□□□ -1.24
SMCHD1-213ENST00000609587 RNASE1P07998 156 aaKnown RBP7.28□□□□□ -1.24
SMCHD1-213ENST00000609587 FUT4P22083 530 aa7.28□□□□□ -1.24
SMCHD1-213ENST00000609587 BNIP3Q12983 259 aa7.28□□□□□ -1.24
SMCHD1-213ENST00000609587 ZNF428Q96B54 188 aa7.28□□□□□ -1.24
SMCHD1-213ENST00000609587 TCF12Q99081 682 aa7.28□□□□□ -1.24
SMCHD1-213ENST00000609587 MBNL3Q9NUK0 354 aaKnown RBP7.28□□□□□ -1.24
SMCHD1-213ENST00000609587 PNMA6FA0A0J9YX94 578 aa7.27□□□□□ -1.25
SMCHD1-213ENST00000609587 LDHBP07195 334 aaKnown RBP7.27□□□□□ -1.25
SMCHD1-213ENST00000609587 ZNF16P17020 682 aaPredicted RBP7.27□□□□□ -1.25
SMCHD1-213ENST00000609587 ATP2B2Q01814 1243 aa7.27□□□□□ -1.25
SMCHD1-213ENST00000609587 MESP2Q0VG99 397 aa7.27□□□□□ -1.25
SMCHD1-213ENST00000609587 ENOX2Q16206 610 aaKnown RBP7.27□□□□□ -1.25
SMCHD1-213ENST00000609587 ASAP3Q8TDY4 903 aa7.27□□□□□ -1.25
SMCHD1-213ENST00000609587 KRTAP17-1Q9BYP8 105 aa7.27□□□□□ -1.25
SMCHD1-213ENST00000609587 LIN7BQ9HAP6 207 aa7.27□□□□□ -1.25
SMCHD1-213ENST00000609587 NPHS2Q9NP85 383 aa7.27□□□□□ -1.25
SMCHD1-213ENST00000609587 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.26□□□□□ -1.25
SMCHD1-213ENST00000609587 ZNF865P0CJ78 1059 aaPredicted RBP7.26□□□□□ -1.25
SMCHD1-213ENST00000609587 FGD1P98174 961 aa7.26□□□□□ -1.25
SMCHD1-213ENST00000609587 TAGLNQ01995 201 aaKnown RBP7.26□□□□□ -1.25
SMCHD1-213ENST00000609587 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
SMCHD1-213ENST00000609587 LRRN4CLQ8ND94 238 aa7.26□□□□□ -1.25
SMCHD1-213ENST00000609587 TMEM40Q8WWA1 233 aa7.26□□□□□ -1.25
SMCHD1-213ENST00000609587 MISP3Q96FF7 219 aa7.26□□□□□ -1.25
SMCHD1-213ENST00000609587 A0A096LPE4 126 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms