RNA–Protein interactions for RNA: ENST00000609401.5

LINC01278-205, Transcript of long intergenic non-protein coding RNA 1278, human

TSL 2 BASIC

Gene LINC01278, Length 2,886 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01278-205	ENST00000609401	MTF1	Q14872	753 aa		11.21	□□□□□ -0.62
LINC01278-205	ENST00000609401	ANO1	Q5XXA6	986 aa		11.21	□□□□□ -0.62
LINC01278-205	ENST00000609401	TTLL5	Q6EMB2	1281 aa		11.21	□□□□□ -0.62
LINC01278-205	ENST00000609401	STOX1	Q6ZVD7	989 aa		11.21	□□□□□ -0.62
LINC01278-205	ENST00000609401	ZNF274	Q96GC6	653 aa	Predicted RBP	11.21	□□□□□ -0.62
LINC01278-205	ENST00000609401	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.21	□□□□□ -0.62
LINC01278-205	ENST00000609401	NAA15	Q9BXJ9	866 aa	Known RBP	11.21	□□□□□ -0.62
LINC01278-205	ENST00000609401	CDHR2	Q9BYE9	1310 aa		11.21	□□□□□ -0.62
LINC01278-205	ENST00000609401	CCT5	P48643	541 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	TDO2	P48775	406 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	SKIDA1	Q1XH10	827 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	MAP9	Q49MG5	647 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	IGSF22	Q8N9C0	903 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	IL17RE	Q8NFR9	667 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	CLIC6	Q96NY7	704 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	PANX2	Q96RD6	677 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	MROH7-TTC4	A0A0A0MT08	1334 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	IGSF1	Q8N6C5	1336 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	USP31	Q70CQ4	1352 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	SOWAHD	A6NJG2	315 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	PPFIA3	O75145	1194 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	FDPS	P14324	419 aa	Known RBP	11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	MCM3	P25205	808 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	PDIA3	P30101	505 aa	Known RBP	11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	SATB1	Q01826	763 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	PNOC	Q13519	176 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	FBXW10	Q5XX13	1052 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	CNPY4	Q8N129	248 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	C8orf76	Q96K31	380 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	A1CF	Q9NQ94	594 aa	Known RBP	11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	RAI14	Q9P0K7	980 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	RFX7	Q2KHR2	1363 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	NALCN	Q8IZF0	1738 aa		11.2	□□□□□ -0.62
LINC01278-205	ENST00000609401	INPP5B	P32019	993 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	EXOSC10	Q01780	885 aa	Known RBP	11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	TRDN	Q13061	729 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	EYA1	Q99502	592 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	NAPG	Q99747	312 aa	Predicted RBP	11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	CARD10	Q9BWT7	1032 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	CHPF2	Q9P2E5	772 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	HPCAL4	Q9UM19	191 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	FMN2	Q9NZ56	1722 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	MCMDC2	Q4G0Z9	681 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	CCDC129	Q6ZRS4	1044 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	SLC35F6	Q8N357	371 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	CCDC148	Q8NFR7	591 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	STAG1	Q8WVM7	1258 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	HPSE	Q9Y251	543 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	FLT4	P35916	1363 aa		11.19	□□□□□ -0.62
LINC01278-205	ENST00000609401	OTUD7B	Q6GQQ9	843 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	RAD9B	Q6WBX8	426 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	FAM76A	Q8TAV0	307 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	EDC3	Q96F86	508 aa	Known RBP	11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	ZNF609	O15014	1411 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	LAMA4	Q16363	1823 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	SHTN1	A0MZ66	631 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	HOXB7	P09629	217 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	SLC39A14	Q15043	492 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	GBP6	Q6ZN66	633 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	RASGRP2	Q7LDG7	609 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	PRPF38A	Q8NAV1	312 aa	Known RBP	11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	NOA1	Q8NC60	698 aa	Known RBP	11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	ZNF18	P17022	549 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	IRAK1	P51617	712 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	PDE4B	Q07343	736 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	STIM1	Q13586	685 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	HSP90AA4P	Q58FG1	418 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	GIMAP7	Q8NHV1	300 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	KAT14	Q9H8E8	782 aa		11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	TTF2	Q9UNY4	1162 aa	Known RBP	11.18	□□□□□ -0.62
LINC01278-205	ENST00000609401	C21orf2	O43822	256 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	MARCKS	P29966	332 aa	Predicted RBP	11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	JMY	Q8N9B5	988 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	CABS1	Q96KC9	395 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	NFE2L3	Q9Y4A8	694 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	PRR36	Q9H6K5	1346 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401		A0A0U1RQJ8	604 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	FAM237A	A0A1B0GTK4	181 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	DDR1	Q08345	913 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	TEF	Q10587	303 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	PPFIA1	Q13136	1202 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	NR1I3	Q14994	352 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	METTL16	Q86W50	562 aa	Known RBP	11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	ENOX1	Q8TC92	643 aa	Known RBP	11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	COG1	Q8WTW3	980 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	ATRIP	Q8WXE1	791 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	GNL3L	Q9NVN8	582 aa	Known RBP	11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	MYO1A	Q9UBC5	1043 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	DACH1	Q9UI36	760 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	HOOK1	Q9UJC3	728 aa	Known RBP	11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	PCDHA5	Q9Y5H7	936 aa		11.17	□□□□□ -0.62
LINC01278-205	ENST00000609401	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.16	□□□□□ -0.62
LINC01278-205	ENST00000609401	PPP6R2	O75170	966 aa		11.16	□□□□□ -0.62
LINC01278-205	ENST00000609401	TFRC	P02786	760 aa	Known RBP	11.16	□□□□□ -0.62
LINC01278-205	ENST00000609401	ATP5J	P18859	108 aa		11.16	□□□□□ -0.62
LINC01278-205	ENST00000609401	USP14	P54578	494 aa		11.16	□□□□□ -0.62
LINC01278-205	ENST00000609401	AKAP17A	Q02040	695 aa	Known RBP	11.16	□□□□□ -0.62
LINC01278-205	ENST00000609401	CCDC102B	Q68D86	513 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 61 ms