RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 CPSF6Q16630 551 aaKnown RBP eCLIP9.67□□□□□ -0.86
LINC00458-206ENST00000607494 PI16Q6UXB8 463 aa9.67□□□□□ -0.86
LINC00458-206ENST00000607494 EPS8L3Q8TE67 593 aaKnown RBP9.67□□□□□ -0.86
LINC00458-206ENST00000607494 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
LINC00458-206ENST00000607494 RNF114Q9Y508 228 aa9.67□□□□□ -0.86
LINC00458-206ENST00000607494 LIG1P18858 919 aa9.66□□□□□ -0.86
LINC00458-206ENST00000607494 TXKP42681 527 aa9.66□□□□□ -0.86
LINC00458-206ENST00000607494 MAP7Q14244 749 aa9.66□□□□□ -0.86
LINC00458-206ENST00000607494 GRM2Q14416 872 aa9.66□□□□□ -0.86
LINC00458-206ENST00000607494 PRPF40BQ6NWY9 871 aaKnown RBP9.66□□□□□ -0.86
LINC00458-206ENST00000607494 GLIS3Q8NEA6 775 aa9.66□□□□□ -0.86
LINC00458-206ENST00000607494 C1GALT1Q9NS00 363 aa9.66□□□□□ -0.86
LINC00458-206ENST00000607494 ZC3H7BQ9UGR2 993 aaKnown RBP9.66□□□□□ -0.86
LINC00458-206ENST00000607494 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.65□□□□□ -0.86
LINC00458-206ENST00000607494 PRNPP04156 253 aa9.65□□□□□ -0.86
LINC00458-206ENST00000607494 SEZ6L2Q6UXD5 910 aa9.65□□□□□ -0.86
LINC00458-206ENST00000607494 VSIG10LQ86VR7 867 aa9.65□□□□□ -0.86
LINC00458-206ENST00000607494 GSX1Q9H4S2 264 aaPredicted RBP9.65□□□□□ -0.86
LINC00458-206ENST00000607494 CCDC86Q9H6F5 360 aaKnown RBP9.65□□□□□ -0.86
LINC00458-206ENST00000607494 TMEM238LA0A1B0GVL6 79 aa9.64□□□□□ -0.87
LINC00458-206ENST00000607494 EIF4EBP3O60516 100 aaPredicted RBP9.64□□□□□ -0.87
LINC00458-206ENST00000607494 COL19A1Q14993 1142 aa9.64□□□□□ -0.87
LINC00458-206ENST00000607494 HP1BP3Q5SSJ5 553 aaPredicted RBP9.64□□□□□ -0.87
LINC00458-206ENST00000607494 TMPRSS2O15393 492 aa9.63□□□□□ -0.87
LINC00458-206ENST00000607494 NPM2Q86SE8 214 aaKnown RBP9.63□□□□□ -0.87
LINC00458-206ENST00000607494 TP53INP2Q8IXH6 220 aa9.63□□□□□ -0.87
LINC00458-206ENST00000607494 CSRNP1Q96S65 589 aa9.63□□□□□ -0.87
LINC00458-206ENST00000607494 KRTAP9-9Q9BYP9 154 aa9.63□□□□□ -0.87
LINC00458-206ENST00000607494 KRTAP9-4Q9BYQ2 154 aa9.63□□□□□ -0.87
LINC00458-206ENST00000607494 DNAJC25Q9H1X3 360 aa9.63□□□□□ -0.87
LINC00458-206ENST00000607494 PTPN12Q05209 780 aaKnown RBP9.62□□□□□ -0.87
LINC00458-206ENST00000607494 AP3B2Q13367 1082 aa9.62□□□□□ -0.87
LINC00458-206ENST00000607494 DDX54Q8TDD1 881 aaKnown RBP9.62□□□□□ -0.87
LINC00458-206ENST00000607494 CITED4Q96RK1 184 aa9.62□□□□□ -0.87
LINC00458-206ENST00000607494 BSDC1Q9NW68 430 aaPredicted RBP9.62□□□□□ -0.87
LINC00458-206ENST00000607494 ZNF862O60290 1169 aa9.61□□□□□ -0.87
LINC00458-206ENST00000607494 DUSP27Q5VZP5 1158 aa9.61□□□□□ -0.87
LINC00458-206ENST00000607494 FLCNQ8NFG4 579 aa9.61□□□□□ -0.87
LINC00458-206ENST00000607494 TRAIPQ9BWF2 469 aa9.61□□□□□ -0.87
LINC00458-206ENST00000607494 ZFYVE1Q9HBF4 777 aa9.61□□□□□ -0.87
LINC00458-206ENST00000607494 FCGRTP55899 365 aa9.6□□□□□ -0.87
LINC00458-206ENST00000607494 PDE4CQ08493 712 aa9.6□□□□□ -0.87
LINC00458-206ENST00000607494 CDK5R2Q13319 367 aa9.6□□□□□ -0.87
LINC00458-206ENST00000607494 ZNF574Q6ZN55 896 aaPredicted RBP9.6□□□□□ -0.87
LINC00458-206ENST00000607494 CCER1Q8TC90 406 aaPredicted RBP9.6□□□□□ -0.87
LINC00458-206ENST00000607494 CCDC9Q9Y3X0 531 aaKnown RBP9.6□□□□□ -0.87
LINC00458-206ENST00000607494 STK35Q8TDR2 534 aa9.59□□□□□ -0.87
LINC00458-206ENST00000607494 FBXL18Q96ME1 805 aa9.59□□□□□ -0.87
LINC00458-206ENST00000607494 RBCK1Q9BYM8 510 aa9.59□□□□□ -0.87
LINC00458-206ENST00000607494 PAK6Q9NQU5 681 aaPredicted RBP9.59□□□□□ -0.87
LINC00458-206ENST00000607494 CRIM1Q9NZV1 1036 aa9.59□□□□□ -0.87
LINC00458-206ENST00000607494 GPN3Q9UHW5 284 aaPredicted RBP9.59□□□□□ -0.87
LINC00458-206ENST00000607494 RPS26P11Q5JNZ5 115 aaPredicted RBP9.58□□□□□ -0.88
LINC00458-206ENST00000607494 DTHD1Q6ZMT9 781 aa9.58□□□□□ -0.88
LINC00458-206ENST00000607494 CBLL1Q75N03 491 aa9.58□□□□□ -0.88
LINC00458-206ENST00000607494 TMC7Q7Z402 723 aa9.58□□□□□ -0.88
LINC00458-206ENST00000607494 WFDC3Q8IUB2 231 aa9.58□□□□□ -0.88
LINC00458-206ENST00000607494 ALKBH8Q96BT7 664 aaKnown RBP9.58□□□□□ -0.88
LINC00458-206ENST00000607494 DMRTB1Q96MA1 342 aa9.58□□□□□ -0.88
LINC00458-206ENST00000607494 FANCD2OSQ96PS1 177 aa9.58□□□□□ -0.88
LINC00458-206ENST00000607494 TRAK1Q9UPV9 953 aa9.58□□□□□ -0.88
LINC00458-206ENST00000607494 PCDHGC5Q9Y5F6 944 aa9.58□□□□□ -0.88
LINC00458-206ENST00000607494 U3KQE9 123 aa9.58□□□□□ -0.88
LINC00458-206ENST00000607494 SOWAHDA6NJG2 315 aa9.57□□□□□ -0.88
LINC00458-206ENST00000607494 GSTP1P09211 210 aaKnown RBP9.57□□□□□ -0.88
LINC00458-206ENST00000607494 FAM87AP0C7U9 286 aa9.56□□□□□ -0.88
LINC00458-206ENST00000607494 HCLS1P14317 486 aaPredicted RBP9.56□□□□□ -0.88
LINC00458-206ENST00000607494 CYP27A1Q02318 531 aa9.56□□□□□ -0.88
LINC00458-206ENST00000607494 ID3Q02535 119 aa9.56□□□□□ -0.88
LINC00458-206ENST00000607494 OGFOD3Q6PK18 319 aa9.56□□□□□ -0.88
LINC00458-206ENST00000607494 FAM181AQ8N9Y4 354 aa9.56□□□□□ -0.88
LINC00458-206ENST00000607494 PIDD1Q9HB75 910 aa9.56□□□□□ -0.88
LINC00458-206ENST00000607494 DISC1Q9NRI5 854 aa9.56□□□□□ -0.88
LINC00458-206ENST00000607494 YBX3P16989 372 aaKnown RBP eCLIP9.55□□□□□ -0.88
LINC00458-206ENST00000607494 TTLL4Q14679 1199 aa9.55□□□□□ -0.88
LINC00458-206ENST00000607494 PDZD3Q86UT5 571 aa9.55□□□□□ -0.88
LINC00458-206ENST00000607494 KCNB2Q92953 911 aa9.55□□□□□ -0.88
LINC00458-206ENST00000607494 BCO2Q9BYV7 579 aa9.55□□□□□ -0.88
LINC00458-206ENST00000607494 BIN2Q9UBW5 565 aaPredicted RBP9.55□□□□□ -0.88
LINC00458-206ENST00000607494 KIF4BQ2VIQ3 1234 aa9.54□□□□□ -0.88
LINC00458-206ENST00000607494 BCL7CQ8WUZ0 217 aaPredicted RBP9.54□□□□□ -0.88
LINC00458-206ENST00000607494 SYNGAP1Q96PV0 1343 aa9.54□□□□□ -0.88
LINC00458-206ENST00000607494 LEFTY1O75610 366 aa9.53□□□□□ -0.88
LINC00458-206ENST00000607494 BNIP3Q12983 259 aa9.53□□□□□ -0.88
LINC00458-206ENST00000607494 SPRED2Q7Z698 418 aa9.53□□□□□ -0.88
LINC00458-206ENST00000607494 PLD6Q8N2A8 252 aaKnown RBP9.53□□□□□ -0.88
LINC00458-206ENST00000607494 ATXN3LQ9H3M9 355 aa9.53□□□□□ -0.88
LINC00458-206ENST00000607494 TMEM39AQ9NV64 488 aa9.53□□□□□ -0.88
LINC00458-206ENST00000607494 NLRP2Q9NX02 1062 aa9.53□□□□□ -0.88
LINC00458-206ENST00000607494 PNMA6FA0A0J9YX94 578 aa9.52□□□□□ -0.89
LINC00458-206ENST00000607494 RNGTTO60942 597 aaKnown RBP9.52□□□□□ -0.89
LINC00458-206ENST00000607494 NEFMP07197 916 aa9.52□□□□□ -0.89
LINC00458-206ENST00000607494 NXPE4Q6UWF7 544 aa9.52□□□□□ -0.89
LINC00458-206ENST00000607494 SULF2Q8IWU5 870 aa9.52□□□□□ -0.89
LINC00458-206ENST00000607494 SMYD4Q8IYR2 804 aaPredicted RBP9.52□□□□□ -0.89
LINC00458-206ENST00000607494 AKAP2Q9Y2D5 859 aa9.52□□□□□ -0.89
LINC00458-206ENST00000607494 SLFN14P0C7P3 912 aa9.51□□□□□ -0.89
LINC00458-206ENST00000607494 CD96P40200 585 aa9.51□□□□□ -0.89
LINC00458-206ENST00000607494 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00458-206ENST00000607494 MPRIPQ6WCQ1 1025 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms