RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 GPR108Q9NPR9 543 aa13.18□□□□□ -0.3
TUBE1-210ENST00000604967 DDX4Q9NQI0 724 aaKnown RBP13.18□□□□□ -0.3
TUBE1-210ENST00000604967 GNL3LQ9NVN8 582 aaKnown RBP13.18□□□□□ -0.3
TUBE1-210ENST00000604967 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.18□□□□□ -0.3
TUBE1-210ENST00000604967 NDUFB9Q9Y6M9 179 aa13.18□□□□□ -0.3
TUBE1-210ENST00000604967 WDHD1O75717 1129 aaPredicted RBP13.17□□□□□ -0.3
TUBE1-210ENST00000604967 NF2P35240 595 aa13.17□□□□□ -0.3
TUBE1-210ENST00000604967 RHBDL3P58872 404 aa13.17□□□□□ -0.3
TUBE1-210ENST00000604967 TCP10Q12799 353 aa13.17□□□□□ -0.3
TUBE1-210ENST00000604967 FKBP1CQ5VVH2 108 aa13.17□□□□□ -0.3
TUBE1-210ENST00000604967 ARMC9Q7Z3E5 817 aa13.17□□□□□ -0.3
TUBE1-210ENST00000604967 NSUN4Q96CB9 384 aaKnown RBP13.17□□□□□ -0.3
TUBE1-210ENST00000604967 WNK4Q96J92 1243 aa13.17□□□□□ -0.3
TUBE1-210ENST00000604967 ABCF2Q9UG63 623 aa13.17□□□□□ -0.3
TUBE1-210ENST00000604967 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
TUBE1-210ENST00000604967 MYO5AQ9Y4I1 1855 aaKnown RBP13.16□□□□□ -0.3
TUBE1-210ENST00000604967 CASP8AP2Q9UKL3 1982 aa13.16□□□□□ -0.3
TUBE1-210ENST00000604967 CYP2E1P05181 493 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-210ENST00000604967 TM4SF4P48230 202 aa13.16□□□□□ -0.3
TUBE1-210ENST00000604967 SUPT20HL1Q3ZLR7 823 aa13.16□□□□□ -0.3
TUBE1-210ENST00000604967 ADGRA1Q86SQ6 560 aa13.16□□□□□ -0.3
TUBE1-210ENST00000604967 FAM83AQ86UY5 434 aa13.16□□□□□ -0.3
TUBE1-210ENST00000604967 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.16□□□□□ -0.3
TUBE1-210ENST00000604967 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-210ENST00000604967 PTPN18Q99952 460 aa13.16□□□□□ -0.3
TUBE1-210ENST00000604967 PIH1D3Q9NQM4 214 aaKnown RBP13.16□□□□□ -0.3
TUBE1-210ENST00000604967 USP40Q9NVE5 1235 aa13.16□□□□□ -0.3
TUBE1-210ENST00000604967 MAST3O60307 1309 aa13.15□□□□□ -0.3
TUBE1-210ENST00000604967 LAMB1P07942 1786 aa13.15□□□□□ -0.3
TUBE1-210ENST00000604967 IGF2BP3O00425 579 aaKnown RBP eCLIP13.15□□□□□ -0.3
TUBE1-210ENST00000604967 ZAP70P43403 619 aa13.15□□□□□ -0.3
TUBE1-210ENST00000604967 OS9Q13438 667 aaPredicted RBP13.15□□□□□ -0.3
TUBE1-210ENST00000604967 TNFAIP1Q13829 316 aa13.15□□□□□ -0.3
TUBE1-210ENST00000604967 VGLL4Q14135 290 aa13.15□□□□□ -0.3
TUBE1-210ENST00000604967 MIGA2Q7L4E1 593 aa13.15□□□□□ -0.3
TUBE1-210ENST00000604967 ELP3Q9H9T3 547 aa13.15□□□□□ -0.3
TUBE1-210ENST00000604967 IL1RAPL2Q9NP60 686 aa13.15□□□□□ -0.3
TUBE1-210ENST00000604967 SNCAIPQ9Y6H5 919 aa13.15□□□□□ -0.3
TUBE1-210ENST00000604967 MROH7-TTC4A0A0A0MT08 1334 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 GPR75-ASB3A0A0A6YYF3 556 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 PPP1R12BO60237 982 aaPredicted RBP13.14□□□□□ -0.31
TUBE1-210ENST00000604967 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 BTDP43251 543 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 RGS3P49796 1198 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 CAP1Q01518 475 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 PDE3AQ14432 1141 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 FAM151AQ8WW52 585 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 ZKSCAN4Q969J2 545 aaPredicted RBP13.14□□□□□ -0.31
TUBE1-210ENST00000604967 SLC10A4Q96EP9 437 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 MS4A4AQ96JQ5 239 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 YTHDC1Q96MU7 727 aaKnown RBP13.14□□□□□ -0.31
TUBE1-210ENST00000604967 ANTXR1Q9H6X2 564 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
TUBE1-210ENST00000604967 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
TUBE1-210ENST00000604967 DDTLA6NHG4 134 aaPredicted RBP13.13□□□□□ -0.31
TUBE1-210ENST00000604967 CA12O43570 354 aa13.13□□□□□ -0.31
TUBE1-210ENST00000604967 INPP5BP32019 993 aa13.13□□□□□ -0.31
TUBE1-210ENST00000604967 GORABQ5T7V8 394 aa13.13□□□□□ -0.31
TUBE1-210ENST00000604967 DZIP1Q86YF9 867 aaKnown RBP13.13□□□□□ -0.31
TUBE1-210ENST00000604967 RHPN1Q8TCX5 695 aa13.13□□□□□ -0.31
TUBE1-210ENST00000604967 OPTNQ96CV9 577 aa13.13□□□□□ -0.31
TUBE1-210ENST00000604967 ZNF512BQ96KM6 892 aaPredicted RBP13.13□□□□□ -0.31
TUBE1-210ENST00000604967 BEGAINQ9BUH8 593 aa13.13□□□□□ -0.31
TUBE1-210ENST00000604967 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
TUBE1-210ENST00000604967 HTTP42858 3142 aa13.12□□□□□ -0.31
TUBE1-210ENST00000604967 APBB1O00213 710 aa13.12□□□□□ -0.31
TUBE1-210ENST00000604967 CAPN15O75808 1086 aa13.12□□□□□ -0.31
TUBE1-210ENST00000604967 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
TUBE1-210ENST00000604967 TNNI2P48788 182 aa13.12□□□□□ -0.31
TUBE1-210ENST00000604967 MAP3K9P80192 1104 aa13.12□□□□□ -0.31
TUBE1-210ENST00000604967 ERICH6Q7L0X2 663 aa13.12□□□□□ -0.31
TUBE1-210ENST00000604967 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
TUBE1-210ENST00000604967 ANKRD13AQ8IZ07 590 aa13.12□□□□□ -0.31
TUBE1-210ENST00000604967 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.12□□□□□ -0.31
TUBE1-210ENST00000604967 ZNF112Q9UJU3 913 aa13.12□□□□□ -0.31
TUBE1-210ENST00000604967 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
TUBE1-210ENST00000604967 PHF20L1A8MW92 1017 aa13.11□□□□□ -0.31
TUBE1-210ENST00000604967 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
TUBE1-210ENST00000604967 ZBTB48P10074 688 aaPredicted RBP13.11□□□□□ -0.31
TUBE1-210ENST00000604967 MS4A1P11836 297 aa13.11□□□□□ -0.31
TUBE1-210ENST00000604967 RRP1BQ14684 758 aaKnown RBP13.11□□□□□ -0.31
TUBE1-210ENST00000604967 TTC39AQ5SRH9 613 aa13.11□□□□□ -0.31
TUBE1-210ENST00000604967 AACSQ86V21 672 aa13.11□□□□□ -0.31
TUBE1-210ENST00000604967 IFNL1Q8IU54 200 aa13.11□□□□□ -0.31
TUBE1-210ENST00000604967 ZGPATQ8N5A5 531 aaKnown RBP13.11□□□□□ -0.31
TUBE1-210ENST00000604967 BRI3BPQ8WY22 251 aa13.11□□□□□ -0.31
TUBE1-210ENST00000604967 WRNIP1Q96S55 665 aa13.11□□□□□ -0.31
TUBE1-210ENST00000604967 PCDHB15Q9Y5E8 787 aa13.11□□□□□ -0.31
TUBE1-210ENST00000604967 UNCXA6NJT0 531 aa13.1□□□□□ -0.31
TUBE1-210ENST00000604967 FAM196BA6NMK8 535 aa13.1□□□□□ -0.31
TUBE1-210ENST00000604967 CHGBP05060 677 aa13.1□□□□□ -0.31
TUBE1-210ENST00000604967 MAP3K10Q02779 954 aa13.1□□□□□ -0.31
TUBE1-210ENST00000604967 SPTY2D1Q68D10 685 aaPredicted RBP13.1□□□□□ -0.31
TUBE1-210ENST00000604967 SH3RF3Q8TEJ3 882 aaPredicted RBP13.1□□□□□ -0.31
TUBE1-210ENST00000604967 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
TUBE1-210ENST00000604967 MCOLN1Q9GZU1 580 aa13.1□□□□□ -0.31
TUBE1-210ENST00000604967 TMOD2Q9NZR1 351 aa13.1□□□□□ -0.31
TUBE1-210ENST00000604967 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
TUBE1-210ENST00000604967 SIPA1L1O43166 1804 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms