RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 CDC23Q9UJX2 597 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 PCDHA5Q9Y5H7 936 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 SETD1BQ9UPS6 1966 aaKnown RBP14.24□□□□□ -0.13
CDCA3-212ENST00000604599 FOXN1O15353 648 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 KIF4BQ2VIQ3 1234 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 TTLL5Q6EMB2 1281 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 SHC4Q6S5L8 630 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 BRAPQ7Z569 592 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 METTL16Q86W50 562 aaKnown RBP14.24□□□□□ -0.13
CDCA3-212ENST00000604599 FOXP4Q8IVH2 680 aaPredicted RBP14.24□□□□□ -0.13
CDCA3-212ENST00000604599 CLIC6Q96NY7 704 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 BMP6P22004 513 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 ZNF569Q5MCW4 686 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 CEP112Q8N8E3 955 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 MSANTD4Q8NCY6 345 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 NFE2L3Q9Y4A8 694 aa14.24□□□□□ -0.13
CDCA3-212ENST00000604599 LRRIQ3A6PVS8 624 aaPredicted RBP14.23□□□□□ -0.13
CDCA3-212ENST00000604599 KIF23Q02241 960 aaPredicted RBP14.23□□□□□ -0.13
CDCA3-212ENST00000604599 FAM71BQ8TC56 605 aa14.23□□□□□ -0.13
CDCA3-212ENST00000604599 POTEB2H3BUK9 544 aa14.23□□□□□ -0.13
CDCA3-212ENST00000604599 GOLIM4O00461 696 aa14.23□□□□□ -0.13
CDCA3-212ENST00000604599 SLC39A14Q15043 492 aa14.23□□□□□ -0.13
CDCA3-212ENST00000604599 ZNF827Q17R98 1081 aa14.23□□□□□ -0.13
CDCA3-212ENST00000604599 LONRF3Q496Y0 759 aa14.23□□□□□ -0.13
CDCA3-212ENST00000604599 KDM3BQ7LBC6 1761 aa14.23□□□□□ -0.13
CDCA3-212ENST00000604599 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
CDCA3-212ENST00000604599 CPLX3Q8WVH0 158 aa14.23□□□□□ -0.13
CDCA3-212ENST00000604599 GOLGA8BA8MQT2 603 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 CPLX1O14810 134 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 KIF5CO60282 957 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 IGKV5-2P06315 115 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 HAND2P61296 217 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 FMR1Q06787 632 aaKnown RBP eCLIP14.22□□□□□ -0.13
CDCA3-212ENST00000604599 AIFM3Q96NN9 605 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 HAUS7Q99871 368 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
CDCA3-212ENST00000604599 SH3TC1Q8TE82 1336 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 KLF18A0A0U1RQI7 1052 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 HSPD1P10809 573 aaKnown RBP14.22□□□□□ -0.13
CDCA3-212ENST00000604599 RAD9BQ6WBX8 426 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 KBTBD3Q8NAB2 608 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.22□□□□□ -0.13
CDCA3-212ENST00000604599 HPSEQ9Y251 543 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 UTYO14607 1347 aa14.22□□□□□ -0.13
CDCA3-212ENST00000604599 SPECC1Q5M775 1068 aa14.21□□□□□ -0.13
CDCA3-212ENST00000604599 MICALL1Q8N3F8 863 aa14.21□□□□□ -0.13
CDCA3-212ENST00000604599 TEX13AQ9BXU3 409 aaPredicted RBP14.21□□□□□ -0.13
CDCA3-212ENST00000604599 ADGRG1Q9Y653 693 aa14.21□□□□□ -0.13
CDCA3-212ENST00000604599 RNF40O75150 1001 aa14.21□□□□□ -0.13
CDCA3-212ENST00000604599 RIC3Q7Z5B4 369 aa14.21□□□□□ -0.13
CDCA3-212ENST00000604599 SECISBP2LQ93073 1101 aaKnown RBP14.21□□□□□ -0.13
CDCA3-212ENST00000604599 DSCC1Q9BVC3 393 aa14.21□□□□□ -0.13
CDCA3-212ENST00000604599 RAI14Q9P0K7 980 aa14.21□□□□□ -0.13
CDCA3-212ENST00000604599 PIK3C2AO00443 1686 aa14.21□□□□□ -0.14
CDCA3-212ENST00000604599 PPFIA4O75335 1185 aa14.21□□□□□ -0.14
CDCA3-212ENST00000604599 NOA1Q8NC60 698 aaKnown RBP14.21□□□□□ -0.14
CDCA3-212ENST00000604599 CDC5LQ99459 802 aaKnown RBP14.21□□□□□ -0.14
CDCA3-212ENST00000604599 PTPRUQ92729 1446 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 RFX7Q2KHR2 1363 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 ZNF530Q6P9A1 599 aaPredicted RBP14.2□□□□□ -0.14
CDCA3-212ENST00000604599 TADA2BQ86TJ2 420 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 EFCAB13Q8IY85 973 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 SLC35F6Q8N357 371 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 SAMSN1Q9NSI8 373 aaKnown RBP14.2□□□□□ -0.14
CDCA3-212ENST00000604599 MRC1P22897 1456 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 CTAGE15A4D2H0 777 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 CTAGE9A4FU28 777 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 DDX58O95786 925 aaKnown RBP14.2□□□□□ -0.14
CDCA3-212ENST00000604599 CTAGE8P0CG41 777 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 CCDC102BQ68D86 513 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 CTAGE6Q86UF2 777 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 CTAGE4Q8IX94 777 aa14.2□□□□□ -0.14
CDCA3-212ENST00000604599 MED1Q15648 1581 aaPredicted RBP14.2□□□□□ -0.14
CDCA3-212ENST00000604599 AKR1B15C9JRZ8 316 aaPredicted RBP14.19□□□□□ -0.14
CDCA3-212ENST00000604599 MYO1BO43795 1136 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 ABL1P00519 1130 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 CHRM1P11229 460 aaPredicted RBP14.19□□□□□ -0.14
CDCA3-212ENST00000604599 PTPN12Q05209 780 aaKnown RBP14.19□□□□□ -0.14
CDCA3-212ENST00000604599 C14orf37Q86TY3 774 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 VPS37DQ86XT2 251 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 MSL3Q8N5Y2 521 aaKnown RBP14.19□□□□□ -0.14
CDCA3-212ENST00000604599 TEX33O43247 280 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 ZNF18P17022 549 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 DNAJC21Q5F1R6 531 aaKnown RBP14.19□□□□□ -0.14
CDCA3-212ENST00000604599 MMS22LQ6ZRQ5 1243 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 AFAP1L1Q8TED9 768 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 MED4Q9NPJ6 270 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 KCNH3Q9ULD8 1083 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 HPS5Q9UPZ3 1129 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 MAST3O60307 1309 aa14.19□□□□□ -0.14
CDCA3-212ENST00000604599 RIN2Q8WYP3 895 aaPredicted RBP14.18□□□□□ -0.14
CDCA3-212ENST00000604599 GDAP1L1Q96MZ0 367 aa14.18□□□□□ -0.14
CDCA3-212ENST00000604599 NEUROD6Q96NK8 337 aa14.18□□□□□ -0.14
CDCA3-212ENST00000604599 GBP3Q9H0R5 595 aa14.18□□□□□ -0.14
CDCA3-212ENST00000604599 ACBD3Q9H3P7 528 aa14.18□□□□□ -0.14
CDCA3-212ENST00000604599 PAG1Q9NWQ8 432 aa14.18□□□□□ -0.14
CDCA3-212ENST00000604599 SLIT1O75093 1534 aa14.18□□□□□ -0.14
CDCA3-212ENST00000604599 RESP18Q5W5W9 173 aa14.18□□□□□ -0.14
CDCA3-212ENST00000604599 NCAPH2Q6IBW4 605 aa14.18□□□□□ -0.14
CDCA3-212ENST00000604599 JMYQ8N9B5 988 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms