RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 SLC5A6Q9Y289 635 aa8.13□□□□□ -1.11
FOCAD-210ENST00000603844 URB2Q14146 1524 aaKnown RBP8.13□□□□□ -1.11
FOCAD-210ENST00000603844 FGD5Q6ZNL6 1462 aa8.13□□□□□ -1.11
FOCAD-210ENST00000603844 FZD6O60353 706 aa8.12□□□□□ -1.11
FOCAD-210ENST00000603844 SSFA2P28290 1259 aa8.12□□□□□ -1.11
FOCAD-210ENST00000603844 FAM9AQ8IZU1 332 aaPredicted RBP8.12□□□□□ -1.11
FOCAD-210ENST00000603844 GJD3Q8N144 294 aa8.12□□□□□ -1.11
FOCAD-210ENST00000603844 STK11IPQ8N1F8 1099 aa8.12□□□□□ -1.11
FOCAD-210ENST00000603844 C1GALT1Q9NS00 363 aa8.12□□□□□ -1.11
FOCAD-210ENST00000603844 RAD18Q9NS91 495 aa8.12□□□□□ -1.11
FOCAD-210ENST00000603844 A0A1W2PP55 124 aa8.11□□□□□ -1.11
FOCAD-210ENST00000603844 POLR3DP05423 398 aaPredicted RBP8.11□□□□□ -1.11
FOCAD-210ENST00000603844 ASPAP45381 313 aa8.11□□□□□ -1.11
FOCAD-210ENST00000603844 GRIA4P48058 902 aa8.11□□□□□ -1.11
FOCAD-210ENST00000603844 SPRED3Q2MJR0 410 aa8.11□□□□□ -1.11
FOCAD-210ENST00000603844 OGFOD3Q6PK18 319 aa8.11□□□□□ -1.11
FOCAD-210ENST00000603844 WFDC3Q8IUB2 231 aa8.11□□□□□ -1.11
FOCAD-210ENST00000603844 CCDC97Q96F63 343 aaPredicted RBP8.11□□□□□ -1.11
FOCAD-210ENST00000603844 TCF12Q99081 682 aa8.11□□□□□ -1.11
FOCAD-210ENST00000603844 AP4E1Q9UPM8 1137 aa8.11□□□□□ -1.11
FOCAD-210ENST00000603844 BIN1O00499 593 aa8.1□□□□□ -1.11
FOCAD-210ENST00000603844 PLCL1Q15111 1095 aa8.1□□□□□ -1.11
FOCAD-210ENST00000603844 GALNT12Q8IXK2 581 aa8.1□□□□□ -1.11
FOCAD-210ENST00000603844 DDX54Q8TDD1 881 aaKnown RBP8.1□□□□□ -1.11
FOCAD-210ENST00000603844 CORO1BQ9BR76 489 aa8.1□□□□□ -1.11
FOCAD-210ENST00000603844 TRIM56Q9BRZ2 755 aaKnown RBP8.1□□□□□ -1.11
FOCAD-210ENST00000603844 KRTAP4-9Q9BYQ8 210 aa8.1□□□□□ -1.11
FOCAD-210ENST00000603844 LIN7BQ9HAP6 207 aa8.1□□□□□ -1.11
FOCAD-210ENST00000603844 SERPINA10Q9UK55 444 aa8.1□□□□□ -1.11
FOCAD-210ENST00000603844 SOGA1O94964 1423 aa8.1□□□□□ -1.11
FOCAD-210ENST00000603844 POLA1P09884 1462 aaPredicted RBP8.09□□□□□ -1.11
FOCAD-210ENST00000603844 DYNC1LI2O43237 492 aaPredicted RBP8.09□□□□□ -1.11
FOCAD-210ENST00000603844 ZNF792Q3KQV3 632 aa8.09□□□□□ -1.11
FOCAD-210ENST00000603844 ZNF574Q6ZN55 896 aaPredicted RBP8.09□□□□□ -1.11
FOCAD-210ENST00000603844 SPRED2Q7Z698 418 aa8.09□□□□□ -1.11
FOCAD-210ENST00000603844 MISP3Q96FF7 219 aa8.09□□□□□ -1.11
FOCAD-210ENST00000603844 EEA1Q15075 1411 aa8.09□□□□□ -1.11
FOCAD-210ENST00000603844 WDR62O43379 1518 aa8.08□□□□□ -1.12
FOCAD-210ENST00000603844 SYNGAP1Q96PV0 1343 aa8.08□□□□□ -1.12
FOCAD-210ENST00000603844 ECEL1O95672 775 aa8.08□□□□□ -1.12
FOCAD-210ENST00000603844 B3GALT4O96024 378 aa8.08□□□□□ -1.12
FOCAD-210ENST00000603844 SF3B2Q13435 895 aaKnown RBP8.08□□□□□ -1.12
FOCAD-210ENST00000603844 CYP27C1Q4G0S4 372 aa8.08□□□□□ -1.12
FOCAD-210ENST00000603844 CCDC87Q9NVE4 849 aa8.08□□□□□ -1.12
FOCAD-210ENST00000603844 DAGLAQ9Y4D2 1042 aa8.08□□□□□ -1.12
FOCAD-210ENST00000603844 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.08□□□□□ -1.12
FOCAD-210ENST00000603844 THOC2Q8NI27 1593 aaKnown RBP8.08□□□□□ -1.12
FOCAD-210ENST00000603844 CARMIL2Q6F5E8 1435 aa8.07□□□□□ -1.12
FOCAD-210ENST00000603844 AOC2O75106 756 aa8.07□□□□□ -1.12
FOCAD-210ENST00000603844 FKBP4Q02790 459 aaKnown RBP eCLIP8.07□□□□□ -1.12
FOCAD-210ENST00000603844 ZNF648Q5T619 568 aaPredicted RBP8.07□□□□□ -1.12
FOCAD-210ENST00000603844 CUX2O14529 1486 aa8.06□□□□□ -1.12
FOCAD-210ENST00000603844 TMEM88BA6NKF7 163 aa8.06□□□□□ -1.12
FOCAD-210ENST00000603844 WDR18Q9BV38 432 aa8.06□□□□□ -1.12
FOCAD-210ENST00000603844 MTMR7Q9Y216 660 aa8.06□□□□□ -1.12
FOCAD-210ENST00000603844 RAD54L2Q9Y4B4 1467 aa8.06□□□□□ -1.12
FOCAD-210ENST00000603844 KIF27Q86VH2 1401 aa8.05□□□□□ -1.12
FOCAD-210ENST00000603844 RUSC2Q8N2Y8 1516 aa8.05□□□□□ -1.12
FOCAD-210ENST00000603844 KIAA0319Q5VV43 1072 aa8.05□□□□□ -1.12
FOCAD-210ENST00000603844 ATG4DQ86TL0 474 aaPredicted RBP8.05□□□□□ -1.12
FOCAD-210ENST00000603844 ZNF576Q9H609 170 aa8.05□□□□□ -1.12
FOCAD-210ENST00000603844 LGR6Q9HBX8 967 aa8.05□□□□□ -1.12
FOCAD-210ENST00000603844 PPP1R9AQ9ULJ8 1098 aa8.05□□□□□ -1.12
FOCAD-210ENST00000603844 FUT4P22083 530 aa8.04□□□□□ -1.12
FOCAD-210ENST00000603844 ITPKAP23677 461 aa8.04□□□□□ -1.12
FOCAD-210ENST00000603844 BNIP3Q12983 259 aa8.04□□□□□ -1.12
FOCAD-210ENST00000603844 PDE3AQ14432 1141 aa8.04□□□□□ -1.12
FOCAD-210ENST00000603844 NETO1Q8TDF5 533 aa8.04□□□□□ -1.12
FOCAD-210ENST00000603844 ABCA10Q8WWZ4 1543 aa8.03□□□□□ -1.12
FOCAD-210ENST00000603844 DBX1A6NMT0 343 aa8.03□□□□□ -1.12
FOCAD-210ENST00000603844 AP3B2Q13367 1082 aa8.03□□□□□ -1.12
FOCAD-210ENST00000603844 GLIS3Q8NEA6 775 aa8.03□□□□□ -1.12
FOCAD-210ENST00000603844 WDR97A6NE52 1622 aa8.03□□□□□ -1.12
FOCAD-210ENST00000603844 IFT140Q96RY7 1462 aa8.02□□□□□ -1.13
FOCAD-210ENST00000603844 FARP2O94887 1054 aaPredicted RBP8.02□□□□□ -1.13
FOCAD-210ENST00000603844 CD8BP10966 210 aa8.02□□□□□ -1.13
FOCAD-210ENST00000603844 PLD6Q8N2A8 252 aaKnown RBP8.02□□□□□ -1.13
FOCAD-210ENST00000603844 RC3H2Q9HBD1 1191 aaKnown RBP8.02□□□□□ -1.13
FOCAD-210ENST00000603844 TARBP1Q13395 1621 aaKnown RBP8.01□□□□□ -1.13
FOCAD-210ENST00000603844 TMPRSS2O15393 492 aa8.01□□□□□ -1.13
FOCAD-210ENST00000603844 FAM87AP0C7U9 286 aa8.01□□□□□ -1.13
FOCAD-210ENST00000603844 PTPN12Q05209 780 aaKnown RBP8.01□□□□□ -1.13
FOCAD-210ENST00000603844 ZNF124Q15973 351 aa8.01□□□□□ -1.13
FOCAD-210ENST00000603844 FAM168AQ92567 244 aa8.01□□□□□ -1.13
FOCAD-210ENST00000603844 MBNL3Q9NUK0 354 aaKnown RBP8.01□□□□□ -1.13
FOCAD-210ENST00000603844 CRIM1Q9NZV1 1036 aa8.01□□□□□ -1.13
FOCAD-210ENST00000603844 VAV3Q9UKW4 847 aa8.01□□□□□ -1.13
FOCAD-210ENST00000603844 ABL1P00519 1130 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 NEFLP07196 543 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 RNASE1P07998 156 aaKnown RBP8□□□□□ -1.13
FOCAD-210ENST00000603844 PRKCQQ04759 706 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 CDK5R2Q13319 367 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 LCE4AQ5TA78 99 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 USPL1Q5W0Q7 1092 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 PHLDB3Q6NSJ2 640 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 FAM181AQ8N9Y4 354 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 TMEM40Q8WWA1 233 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 EHD4Q9H223 541 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 ATXN3LQ9H3M9 355 aa8□□□□□ -1.13
FOCAD-210ENST00000603844 ABCA5Q8WWZ7 1642 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms