RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-206	ENST00000602307	ANGEL1	Q9UNK9	670 aa	Known RBP	13.66	□□□□□ -0.22
PTPN23-206	ENST00000602307	ATP2C2	O75185	946 aa		13.66	□□□□□ -0.22
PTPN23-206	ENST00000602307	GADD45B	O75293	160 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN23-206	ENST00000602307	FAM13A	O94988	1023 aa		13.66	□□□□□ -0.22
PTPN23-206	ENST00000602307	BABAM1	Q9NWV8	329 aa		13.66	□□□□□ -0.22
PTPN23-206	ENST00000602307	LUC7L2	Q9Y383	392 aa	Known RBP	13.66	□□□□□ -0.22
PTPN23-206	ENST00000602307	INSR	P06213	1382 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	PARP1	P09874	1014 aa	Known RBP	13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	HIBADH	P31937	336 aa	Known RBP	13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	KRT83	P78385	493 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	ANO1	Q5XXA6	986 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	CEP112	Q8N8E3	955 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	LMBRD1	Q9NUN5	540 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	KCNQ3	O43525	872 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	TRAPPC3L	Q5T215	181 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	HS2ST1	Q7LGA3	356 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	NEK11	Q8NG66	645 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	KDM5A	P29375	1690 aa	Known RBP	13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	PDE8A	O60658	829 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	USP37	Q86T82	979 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	ELP1	O95163	1332 aa		13.65	□□□□□ -0.22
PTPN23-206	ENST00000602307	BICDL2	A1A5D9	508 aa		13.65	□□□□□ -0.23
PTPN23-206	ENST00000602307	TMEM110-MUSTN1	A8MSY1	372 aa		13.65	□□□□□ -0.23
PTPN23-206	ENST00000602307	EIF4A1	P60842	406 aa	Known RBP	13.65	□□□□□ -0.23
PTPN23-206	ENST00000602307	RILPL1	Q5EBL4	403 aa		13.65	□□□□□ -0.23
PTPN23-206	ENST00000602307	PIK3AP1	Q6ZUJ8	805 aa		13.65	□□□□□ -0.23
PTPN23-206	ENST00000602307	PHKB	Q93100	1093 aa		13.65	□□□□□ -0.23
PTPN23-206	ENST00000602307	CHAMP1	Q96JM3	812 aa		13.65	□□□□□ -0.23
PTPN23-206	ENST00000602307	PKD2L1	Q9P0L9	805 aa		13.65	□□□□□ -0.23
PTPN23-206	ENST00000602307	PARP3	Q9Y6F1	533 aa		13.65	□□□□□ -0.23
PTPN23-206	ENST00000602307	JAK2	O60674	1132 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	UFL1	O94874	794 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	MICALCL	Q6ZW33	695 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	TTC6	Q86TZ1	520 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	DIS3L2	Q8IYB7	885 aa	Known RBP	13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	CNBD1	Q8NA66	436 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	TMEM87B	Q96K49	555 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	HOMER2	Q9NSB8	354 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	KCNH3	Q9ULD8	1083 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	RHOXF2B	P0C7M4	288 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	ZAP70	P43403	619 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	CTDSPL2	Q05D32	466 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	FAM212A	Q96EL1	285 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	RHOXF2	Q9BQY4	288 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	SELENOO	Q9BVL4	669 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	PLVAP	Q9BX97	442 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	RBM28	Q9NW13	759 aa	Known RBP	13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	MAGI2	Q86UL8	1455 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	TMEM63C	Q9P1W3	806 aa		13.64	□□□□□ -0.23
PTPN23-206	ENST00000602307	PKP1	Q13835	747 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	VPS16	Q9H269	839 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	hCG_1642624	A0A1W2PR95	340 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	DEXI	O95424	95 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	TERF1	P54274	439 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	ATL3	Q6DD88	541 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	PPP1R9B	Q96SB3	815 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	INCENP	Q9NQS7	918 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	PARP10	Q53GL7	1025 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	DPH6	Q7L8W6	267 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	FCHSD1	Q86WN1	690 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	CCNL1	Q9UK58	526 aa	Predicted RBP	13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	PTPRT	O14522	1441 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	POLR2D	O15514	142 aa	Known RBP	13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	ZNF445	P59923	1031 aa		13.63	□□□□□ -0.23
PTPN23-206	ENST00000602307	TRAF5	O00463	557 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	GSPT1	P15170	499 aa	Known RBP	13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	CDC37L1	Q7L3B6	337 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	GOLGA1	Q92805	767 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	USP44	Q9H0E7	712 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	GAS2L3	Q86XJ1	694 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	LEO1	Q8WVC0	666 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	CFAP65	Q6ZU64	1925 aa	Known RBP	13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	EEF2	P13639	858 aa	Known RBP	13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	RAPGEF1	Q13905	1077 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	IL17RE	Q8NFR9	667 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	BAG1	Q99933	345 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	SRRT	Q9BXP5	876 aa	Known RBP	13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	IKBKG	Q9Y6K9	419 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	CCDC155	Q8N6L0	562 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	JDP2	Q8WYK2	163 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	UIMC1	Q96RL1	719 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	PSMD1	Q99460	953 aa		13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	MPHOSPH6	Q99547	160 aa	Known RBP	13.62	□□□□□ -0.23
PTPN23-206	ENST00000602307	PLCB3	Q01970	1234 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	SV2B	Q7L1I2	683 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	EYA3	Q99504	573 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	IMPG2	Q9BZV3	1241 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	CTNND2	Q9UQB3	1225 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	AOX1	Q06278	1338 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	BBX	Q8WY36	941 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	LLPH	Q9BRT6	129 aa	Known RBP	13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	HSPA4	P34932	840 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	TBC1D8B	Q0IIM8	1120 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	GRM1	Q13255	1194 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	PAIP2	Q9BPZ3	127 aa	Known RBP	13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	ZNF532	Q9HCE3	1301 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307		A0A1W2PRG0	241 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms