RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-205ENST00000602150 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 CYP2D7A0A087X1C5 515 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 ONECUT3O60422 494 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-205ENST00000602150 EVX2Q03828 476 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 FAM173BQ6P4H8 233 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 KRT222Q8N1A0 295 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 TPCN1Q9ULQ1 816 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 MTMR6Q9Y217 621 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 MINDY4BA8MYZ0 360 aa12.77□□□□□ -0.36
SCN1B-205ENST00000602150 DYNLL1P63167 89 aaKnown RBP12.77□□□□□ -0.36
SCN1B-205ENST00000602150 FAM193AP78312 1265 aa12.77□□□□□ -0.36
SCN1B-205ENST00000602150 CTDSPL2Q05D32 466 aa12.77□□□□□ -0.36
SCN1B-205ENST00000602150 APOBRQ0VD83 1088 aa12.77□□□□□ -0.36
SCN1B-205ENST00000602150 ZMYM1Q5SVZ6 1142 aa12.77□□□□□ -0.36
SCN1B-205ENST00000602150 RNF20Q5VTR2 975 aa12.77□□□□□ -0.36
SCN1B-205ENST00000602150 Q6ZUG5 572 aa12.77□□□□□ -0.36
SCN1B-205ENST00000602150 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.77□□□□□ -0.36
SCN1B-205ENST00000602150 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.36
SCN1B-205ENST00000602150 ZKSCAN3Q9BRR0 538 aa12.77□□□□□ -0.36
SCN1B-205ENST00000602150 NYXQ9GZU5 481 aa12.77□□□□□ -0.36
SCN1B-205ENST00000602150 CCDC66A2RUB6 948 aa12.77□□□□□ -0.37
SCN1B-205ENST00000602150 CYP7A1P22680 504 aa12.77□□□□□ -0.37
SCN1B-205ENST00000602150 ME3Q16798 604 aa12.77□□□□□ -0.37
SCN1B-205ENST00000602150 LUZP1Q86V48 1076 aa12.77□□□□□ -0.37
SCN1B-205ENST00000602150 GUCY1B3Q02153 619 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 RC3H1Q5TC82 1133 aaKnown RBP12.76□□□□□ -0.37
SCN1B-205ENST00000602150 GPR108Q9NPR9 543 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 MED23Q9ULK4 1368 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 PRDM1O75626 825 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 FGAP02671 866 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 PRDX5P30044 214 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 ADGRA1Q86SQ6 560 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 NEK1Q96PY6 1258 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 JAK2O60674 1132 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 UFL1O94874 794 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 TYRO3Q06418 890 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 CAVIN4Q5BKX8 364 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 LCORLQ8N3X6 602 aa12.76□□□□□ -0.37
SCN1B-205ENST00000602150 ZNF75DP51815 510 aa12.75□□□□□ -0.37
SCN1B-205ENST00000602150 RBM43Q6ZSC3 357 aaKnown RBP12.75□□□□□ -0.37
SCN1B-205ENST00000602150 CCDC82Q8N4S0 544 aa12.75□□□□□ -0.37
SCN1B-205ENST00000602150 ZNF397Q8NF99 534 aaPredicted RBP12.75□□□□□ -0.37
SCN1B-205ENST00000602150 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.75□□□□□ -0.37
SCN1B-205ENST00000602150 SMC3Q9UQE7 1217 aa12.75□□□□□ -0.37
SCN1B-205ENST00000602150 FGFR2P21802 821 aa12.75□□□□□ -0.37
SCN1B-205ENST00000602150 ST5P78524 1137 aa12.75□□□□□ -0.37
SCN1B-205ENST00000602150 CACTINQ8WUQ7 758 aaKnown RBP12.75□□□□□ -0.37
SCN1B-205ENST00000602150 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
SCN1B-205ENST00000602150 MYL10Q9BUA6 226 aa12.75□□□□□ -0.37
SCN1B-205ENST00000602150 CBX8Q9HC52 389 aa12.75□□□□□ -0.37
SCN1B-205ENST00000602150 TDO2P48775 406 aa12.75□□□□□ -0.37
SCN1B-205ENST00000602150 FAM84BQ96KN1 310 aaPredicted RBP12.75□□□□□ -0.37
SCN1B-205ENST00000602150 VGLL3A8MV65 326 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 CHRNA5P30532 468 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 DIXDC1Q155Q3 683 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 NYAP1Q6ZVC0 841 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 APPBP2Q92624 585 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 MXD3Q9BW11 206 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 BRWD3Q6RI45 1802 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 MAP3K12Q12852 859 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 GRIK5Q16478 980 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 MAP3K11Q16584 847 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 CEP135Q66GS9 1140 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 TDRD7Q8NHU6 1098 aaKnown RBP12.74□□□□□ -0.37
SCN1B-205ENST00000602150 AATFQ9NY61 560 aaKnown RBP eCLIP12.74□□□□□ -0.37
SCN1B-205ENST00000602150 ELP1O95163 1332 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 GJB2P29033 226 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 ADD2P35612 726 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 DOK7Q18PE1 504 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 BSDC1Q9NW68 430 aaPredicted RBP12.74□□□□□ -0.37
SCN1B-205ENST00000602150 SLC4A4Q9Y6R1 1079 aa12.74□□□□□ -0.37
SCN1B-205ENST00000602150 B4E1Z4 1266 aa12.73□□□□□ -0.37
SCN1B-205ENST00000602150 E7EWF7 191 aa12.73□□□□□ -0.37
SCN1B-205ENST00000602150 FOXP2O15409 715 aa12.73□□□□□ -0.37
SCN1B-205ENST00000602150 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
SCN1B-205ENST00000602150 TTC6Q86TZ1 520 aa12.73□□□□□ -0.37
SCN1B-205ENST00000602150 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
SCN1B-205ENST00000602150 CAPN2P17655 700 aa12.73□□□□□ -0.37
SCN1B-205ENST00000602150 LIG1P18858 919 aa12.73□□□□□ -0.37
SCN1B-205ENST00000602150 CDC25BP30305 580 aa12.73□□□□□ -0.37
SCN1B-205ENST00000602150 CEBPZQ03701 1054 aaKnown RBP12.73□□□□□ -0.37
SCN1B-205ENST00000602150 CCDC144BQ3MJ40 725 aa12.73□□□□□ -0.37
SCN1B-205ENST00000602150 ZNF215Q9UL58 517 aaPredicted RBP12.73□□□□□ -0.37
SCN1B-205ENST00000602150 ZNF804BA4D1E1 1349 aa12.73□□□□□ -0.37
SCN1B-205ENST00000602150 RPS6KB1P23443 525 aa12.72□□□□□ -0.37
SCN1B-205ENST00000602150 HIBADHP31937 336 aaKnown RBP12.72□□□□□ -0.37
SCN1B-205ENST00000602150 GPSM2P81274 684 aa12.72□□□□□ -0.37
SCN1B-205ENST00000602150 ST3GAL1Q11201 340 aa12.72□□□□□ -0.37
SCN1B-205ENST00000602150 TPD52L1Q16890 204 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-205ENST00000602150 FBXO38Q6PIJ6 1188 aa12.72□□□□□ -0.37
SCN1B-205ENST00000602150 CREBRFQ8IUR6 639 aa12.72□□□□□ -0.37
SCN1B-205ENST00000602150 ZNF446Q9NWS9 450 aa12.72□□□□□ -0.37
SCN1B-205ENST00000602150 MYO5AQ9Y4I1 1855 aaKnown RBP12.72□□□□□ -0.37
SCN1B-205ENST00000602150 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
SCN1B-205ENST00000602150 UQCRFS1P1P0C7P4 283 aa12.72□□□□□ -0.37
SCN1B-205ENST00000602150 TM4SF1P30408 202 aa12.72□□□□□ -0.37
SCN1B-205ENST00000602150 ANO6Q4KMQ2 910 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms