RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 MAP4K4O95819 1239 aaPredicted RBP12.14□□□□□ -0.47
UPF1-213ENST00000601981 ZFYP08048 801 aaPredicted RBP12.14□□□□□ -0.47
UPF1-213ENST00000601981 PLCG2P16885 1265 aa12.14□□□□□ -0.47
UPF1-213ENST00000601981 TNNI2P48788 182 aa12.14□□□□□ -0.47
UPF1-213ENST00000601981 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
UPF1-213ENST00000601981 GRIK5Q16478 980 aa12.14□□□□□ -0.47
UPF1-213ENST00000601981 CASC1Q6TDU7 716 aa12.14□□□□□ -0.47
UPF1-213ENST00000601981 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
UPF1-213ENST00000601981 CNTROBQ8N137 903 aa12.14□□□□□ -0.47
UPF1-213ENST00000601981 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
UPF1-213ENST00000601981 ANTXR1Q9H6X2 564 aa12.14□□□□□ -0.47
UPF1-213ENST00000601981 GGA3Q9NZ52 723 aa12.14□□□□□ -0.47
UPF1-213ENST00000601981 DAGLAQ9Y4D2 1042 aa12.14□□□□□ -0.47
UPF1-213ENST00000601981 GAKO14976 1311 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 EGFRP00533 1210 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
UPF1-213ENST00000601981 MFAP1P55081 439 aaKnown RBP12.13□□□□□ -0.47
UPF1-213ENST00000601981 FSTL1Q12841 308 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 NBPF9Q3BBW0 867 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 SLC9C2Q5TAH2 1124 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 ANGEL2Q5VTE6 544 aaKnown RBP12.13□□□□□ -0.47
UPF1-213ENST00000601981 CDC37L1Q7L3B6 337 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 TICAM2Q86XR7 235 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 MAGEB6Q8N7X4 407 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 KBTBD3Q8NAB2 608 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 EVI5LQ96CN4 794 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 ZBED3Q96IU2 234 aaPredicted RBP12.13□□□□□ -0.47
UPF1-213ENST00000601981 FSD1Q9BTV5 496 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 VEZTQ9HBM0 779 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 PGAP2Q9UHJ9 254 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 FOCADQ5VW36 1801 aa12.13□□□□□ -0.47
UPF1-213ENST00000601981 CDK5RAP2Q96SN8 1893 aa12.12□□□□□ -0.47
UPF1-213ENST00000601981 CYP7A1P22680 504 aa12.12□□□□□ -0.47
UPF1-213ENST00000601981 BTDP43251 543 aa12.12□□□□□ -0.47
UPF1-213ENST00000601981 PRMT6Q96LA8 375 aaPredicted RBP12.12□□□□□ -0.47
UPF1-213ENST00000601981 TDRD3Q9H7E2 651 aaKnown RBP12.12□□□□□ -0.47
UPF1-213ENST00000601981 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
UPF1-213ENST00000601981 RFX7Q2KHR2 1363 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 GPR75-ASB3A0A0A6YYF3 556 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 PDE6AP16499 860 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 ADD2P35612 726 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 UBE3CQ15386 1083 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 FKBP1CQ5VVH2 108 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 MAP1SQ66K74 1059 aaPredicted RBP12.11□□□□□ -0.47
UPF1-213ENST00000601981 APOBEC3HQ6NTF7 200 aaKnown RBP12.11□□□□□ -0.47
UPF1-213ENST00000601981 KRT26Q7Z3Y9 468 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 RILPL2Q969X0 211 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 EDC3Q96F86 508 aaKnown RBP12.11□□□□□ -0.47
UPF1-213ENST00000601981 C22orf23Q9BZE7 217 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 USP40Q9NVE5 1235 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 ZNF70Q9UC06 446 aaPredicted RBP12.11□□□□□ -0.47
UPF1-213ENST00000601981 ZNF532Q9HCE3 1301 aa12.11□□□□□ -0.47
UPF1-213ENST00000601981 PCNTO95613 3336 aa12.1□□□□□ -0.47
UPF1-213ENST00000601981 MYH1P12882 1939 aa12.1□□□□□ -0.47
UPF1-213ENST00000601981 CLRN2A0PK11 232 aa12.1□□□□□ -0.47
UPF1-213ENST00000601981 HIP1O00291 1037 aa12.1□□□□□ -0.47
UPF1-213ENST00000601981 NF2P35240 595 aa12.1□□□□□ -0.47
UPF1-213ENST00000601981 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
UPF1-213ENST00000601981 AATFQ9NY61 560 aaKnown RBP eCLIP12.1□□□□□ -0.475e-6■□□□□ 8.9
UPF1-213ENST00000601981 NAV1Q8NEY1 1877 aa12.09□□□□□ -0.47
UPF1-213ENST00000601981 MAGEB6P1A0A0J9YX57 407 aa12.09□□□□□ -0.47
UPF1-213ENST00000601981 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
UPF1-213ENST00000601981 PPP4CP60510 307 aa12.09□□□□□ -0.47
UPF1-213ENST00000601981 CDC42EP5Q6NZY7 148 aa12.09□□□□□ -0.47
UPF1-213ENST00000601981 FAM83AQ86UY5 434 aa12.09□□□□□ -0.47
UPF1-213ENST00000601981 TEX11Q8IYF3 940 aa12.09□□□□□ -0.47
UPF1-213ENST00000601981 AIDAQ96BJ3 306 aa12.09□□□□□ -0.47
UPF1-213ENST00000601981 HOOK2Q96ED9 719 aa12.09□□□□□ -0.47
UPF1-213ENST00000601981 PCDHAC2Q9Y5I4 1007 aa12.09□□□□□ -0.47
UPF1-213ENST00000601981 TCP10L2B9ZVM9 353 aa12.08□□□□□ -0.48
UPF1-213ENST00000601981 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
UPF1-213ENST00000601981 MIGA1Q8NAN2 632 aa12.08□□□□□ -0.48
UPF1-213ENST00000601981 ZNF384Q8TF68 577 aa12.08□□□□□ -0.48
UPF1-213ENST00000601981 APPBP2Q92624 585 aa12.08□□□□□ -0.48
UPF1-213ENST00000601981 GLIS2Q9BZE0 524 aaPredicted RBP12.08□□□□□ -0.48
UPF1-213ENST00000601981 CRNKL1Q9BZJ0 848 aaKnown RBP12.08□□□□□ -0.48
UPF1-213ENST00000601981 DEFB129Q9H1M3 183 aa12.08□□□□□ -0.48
UPF1-213ENST00000601981 ASTN2O75129 1339 aaPredicted RBP12.08□□□□□ -0.48
UPF1-213ENST00000601981 RPAP1Q9BWH6 1393 aaPredicted RBP12.07□□□□□ -0.48
UPF1-213ENST00000601981 TCRBV5S4A2TA0A5A2 114 aa12.07□□□□□ -0.48
UPF1-213ENST00000601981 ENTPD3O75355 529 aa12.07□□□□□ -0.48
UPF1-213ENST00000601981 NPM3O75607 178 aaKnown RBP12.07□□□□□ -0.48
UPF1-213ENST00000601981 REC8O95072 547 aa12.07□□□□□ -0.48
UPF1-213ENST00000601981 USP5P45974 858 aa12.07□□□□□ -0.48
UPF1-213ENST00000601981 SUPT20HL1Q3ZLR7 823 aa12.07□□□□□ -0.48
UPF1-213ENST00000601981 PIAS4Q8N2W9 510 aaPredicted RBP12.07□□□□□ -0.48
UPF1-213ENST00000601981 IDI2Q9BXS1 227 aa12.07□□□□□ -0.48
UPF1-213ENST00000601981 DIAPH3Q9NSV4 1193 aa12.07□□□□□ -0.48
UPF1-213ENST00000601981 MYH8P13535 1937 aa12.06□□□□□ -0.48
UPF1-213ENST00000601981 BAZ2AQ9UIF9 1905 aaKnown RBP12.06□□□□□ -0.48
UPF1-213ENST00000601981 ADM5C9JUS6 153 aa12.06□□□□□ -0.48
UPF1-213ENST00000601981 GNAT2P19087 354 aa12.06□□□□□ -0.48
UPF1-213ENST00000601981 CHMLP26374 656 aa12.06□□□□□ -0.48
UPF1-213ENST00000601981 CACNB3P54284 484 aa12.06□□□□□ -0.48
UPF1-213ENST00000601981 RHBDL3P58872 404 aa12.06□□□□□ -0.48
UPF1-213ENST00000601981 PICALMQ13492 652 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms