RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 ANKLE1Q8NAG6 615 aa22.57■■□□□ 1.2
SSBP4-207ENST00000600244 PARK7Q99497 189 aaKnown RBP22.57■■□□□ 1.2
SSBP4-207ENST00000600244 ANKRD18BA2A2Z9 1011 aa22.56■■□□□ 1.2
SSBP4-207ENST00000600244 INPP5BP32019 993 aa22.56■■□□□ 1.2
SSBP4-207ENST00000600244 CACNB3P54284 484 aa22.56■■□□□ 1.2
SSBP4-207ENST00000600244 CCDC30Q5VVM6 783 aa22.56■■□□□ 1.2
SSBP4-207ENST00000600244 GPAT2Q6NUI2 795 aa22.56■■□□□ 1.2
SSBP4-207ENST00000600244 FAM83AQ86UY5 434 aa22.56■■□□□ 1.2
SSBP4-207ENST00000600244 C8orf58Q8NAV2 365 aa22.56■■□□□ 1.2
SSBP4-207ENST00000600244 HOOK2Q96ED9 719 aa22.56■■□□□ 1.2
SSBP4-207ENST00000600244 UBE2OQ9C0C9 1292 aaKnown RBP22.56■■□□□ 1.2
SSBP4-207ENST00000600244 A0A1B0GUL6 1792 aa22.55■■□□□ 1.2
SSBP4-207ENST00000600244 CYP2C8P10632 490 aa22.55■■□□□ 1.2
SSBP4-207ENST00000600244 GCKRQ14397 625 aa22.55■■□□□ 1.2
SSBP4-207ENST00000600244 GRIK5Q16478 980 aa22.55■■□□□ 1.2
SSBP4-207ENST00000600244 RUNDC1Q96C34 613 aa22.55■■□□□ 1.2
SSBP4-207ENST00000600244 HDLBPQ00341 1268 aaKnown RBP22.54■■□□□ 1.2
SSBP4-207ENST00000600244 FKBP1CQ5VVH2 108 aa22.54■■□□□ 1.2
SSBP4-207ENST00000600244 DCAF15Q66K64 600 aa22.54■■□□□ 1.2
SSBP4-207ENST00000600244 ZNF341Q9BYN7 854 aa22.54■■□□□ 1.2
SSBP4-207ENST00000600244 ZNF112Q9UJU3 913 aa22.54■■□□□ 1.2
SSBP4-207ENST00000600244 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
SSBP4-207ENST00000600244 TTC28Q96AY4 2481 aa22.53■■□□□ 1.2
SSBP4-207ENST00000600244 CHMP4AQ9BY43 222 aa22.52■■□□□ 1.2
SSBP4-207ENST00000600244 NBPF3Q9H094 633 aa22.52■■□□□ 1.2
SSBP4-207ENST00000600244 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.52■■□□□ 1.25e-6■■■□□ 15.8
SSBP4-207ENST00000600244 IFT57Q9NWB7 429 aa22.52■■□□□ 1.2
SSBP4-207ENST00000600244 MIGA2Q7L4E1 593 aa22.51■■□□□ 1.19
SSBP4-207ENST00000600244 FAM84BQ96KN1 310 aaPredicted RBP22.51■■□□□ 1.19
SSBP4-207ENST00000600244 CXCL11O14625 94 aa22.5■■□□□ 1.19
SSBP4-207ENST00000600244 HIBADHP31937 336 aaKnown RBP22.5■■□□□ 1.19
SSBP4-207ENST00000600244 IFIT5Q13325 482 aaKnown RBP22.5■■□□□ 1.19
SSBP4-207ENST00000600244 RPAP1Q9BWH6 1393 aaPredicted RBP22.5■■□□□ 1.19
SSBP4-207ENST00000600244 TNPO2O14787 897 aaKnown RBP22.49■■□□□ 1.19
SSBP4-207ENST00000600244 GYG1P46976 350 aa22.49■■□□□ 1.19
SSBP4-207ENST00000600244 ZDHHC15Q96MV8 337 aa22.49■■□□□ 1.19
SSBP4-207ENST00000600244 MRIQ9BWK5 157 aa22.49■■□□□ 1.19
SSBP4-207ENST00000600244 COL2A1P02458 1487 aaPredicted RBP22.48■■□□□ 1.19
SSBP4-207ENST00000600244 PLIN1O60240 522 aa22.48■■□□□ 1.19
SSBP4-207ENST00000600244 GNAI1P63096 354 aa22.48■■□□□ 1.19
SSBP4-207ENST00000600244 FOXO4P98177 505 aa22.48■■□□□ 1.19
SSBP4-207ENST00000600244 NOL9Q5SY16 702 aaKnown RBP22.48■■□□□ 1.19
SSBP4-207ENST00000600244 APOBEC3HQ6NTF7 200 aaKnown RBP22.48■■□□□ 1.19
SSBP4-207ENST00000600244 C11orf49Q9H6J7 331 aa22.48■■□□□ 1.19
SSBP4-207ENST00000600244 DOCK3Q8IZD9 2030 aa22.47■■□□□ 1.19
SSBP4-207ENST00000600244 COL9A1P20849 921 aa22.47■■□□□ 1.19
SSBP4-207ENST00000600244 TEKT1Q969V4 418 aa22.47■■□□□ 1.19
SSBP4-207ENST00000600244 TMOD2Q9NZR1 351 aa22.47■■□□□ 1.19
SSBP4-207ENST00000600244 UBE4AQ14139 1066 aa22.46■■□□□ 1.19
SSBP4-207ENST00000600244 G2E3Q7L622 706 aa22.46■■□□□ 1.19
SSBP4-207ENST00000600244 TSPYL6Q8N831 410 aa22.46■■□□□ 1.19
SSBP4-207ENST00000600244 FAM161BQ96MY7 647 aa22.46■■□□□ 1.19
SSBP4-207ENST00000600244 LDHAL6AQ6ZMR3 332 aa22.45■■□□□ 1.18
SSBP4-207ENST00000600244 SLC45A1Q9Y2W3 748 aa22.45■■□□□ 1.18
SSBP4-207ENST00000600244 FASTKD5Q7L8L6 764 aaKnown RBP22.44■■□□□ 1.18
SSBP4-207ENST00000600244 ZNF594Q96JF6 807 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-207ENST00000600244 MYH16Q9H6N6 1097 aa22.44■■□□□ 1.18
SSBP4-207ENST00000600244 TAOK2Q9UL54 1235 aa22.44■■□□□ 1.18
SSBP4-207ENST00000600244 OGDHLQ9ULD0 1010 aa22.44■■□□□ 1.18
SSBP4-207ENST00000600244 EYSQ5T1H1 3165 aa22.44■■□□□ 1.18
SSBP4-207ENST00000600244 PFASO15067 1338 aa22.43■■□□□ 1.18
SSBP4-207ENST00000600244 A0A0G2JLL6 359 aaPredicted RBP22.43■■□□□ 1.18
SSBP4-207ENST00000600244 PRRT2Q7Z6L0 340 aaPredicted RBP22.43■■□□□ 1.18
SSBP4-207ENST00000600244 FAM151AQ8WW52 585 aa22.43■■□□□ 1.18
SSBP4-207ENST00000600244 COA7Q96BR5 231 aa22.43■■□□□ 1.18
SSBP4-207ENST00000600244 DDX60LQ5H9U9 1706 aaKnown RBP22.43■■□□□ 1.18
SSBP4-207ENST00000600244 HMGCRP04035 888 aa22.42■■□□□ 1.18
SSBP4-207ENST00000600244 FBXO33Q7Z6M2 555 aa22.42■■□□□ 1.18
SSBP4-207ENST00000600244 LINS1Q8NG48 757 aa22.42■■□□□ 1.18
SSBP4-207ENST00000600244 TBC1D22AQ8WUA7 517 aa22.42■■□□□ 1.18
SSBP4-207ENST00000600244 CDX2Q99626 313 aaPredicted RBP22.42■■□□□ 1.18
SSBP4-207ENST00000600244 HMX1Q9NP08 348 aaPredicted RBP22.42■■□□□ 1.18
SSBP4-207ENST00000600244 LAMA2P24043 3122 aaKnown RBP22.41■■□□□ 1.18
SSBP4-207ENST00000600244 PRUNE2Q8WUY3 3088 aa22.41■■□□□ 1.18
SSBP4-207ENST00000600244 MAFAQ8NHW3 353 aaPredicted RBP22.41■■□□□ 1.18
SSBP4-207ENST00000600244 CNNM1Q9NRU3 951 aa22.41■■□□□ 1.18
SSBP4-207ENST00000600244 ADAMTS8Q9UP79 889 aa22.41■■□□□ 1.18
SSBP4-207ENST00000600244 CHMP3Q9Y3E7 222 aa22.41■■□□□ 1.18
SSBP4-207ENST00000600244 COL6A1P12109 1028 aa22.4■■□□□ 1.18
SSBP4-207ENST00000600244 MDM2Q00987 491 aaPredicted RBP22.4■■□□□ 1.18
SSBP4-207ENST00000600244 CALD1Q05682 793 aaKnown RBP22.4■■□□□ 1.18
SSBP4-207ENST00000600244 TRIM32Q13049 653 aa22.4■■□□□ 1.18
SSBP4-207ENST00000600244 LMBR1LQ6UX01 489 aa22.4■■□□□ 1.18
SSBP4-207ENST00000600244 SYMPKQ92797 1274 aaKnown RBP22.4■■□□□ 1.18
SSBP4-207ENST00000600244 STK31Q9BXU1 1019 aa22.4■■□□□ 1.18
SSBP4-207ENST00000600244 CHAF1AQ13111 956 aaPredicted RBP22.39■■□□□ 1.17
SSBP4-207ENST00000600244 RALBP1Q15311 655 aa22.39■■□□□ 1.17
SSBP4-207ENST00000600244 EPHA10Q5JZY3 1008 aa22.39■■□□□ 1.17
SSBP4-207ENST00000600244 ZNF697Q5TEC3 545 aa22.39■■□□□ 1.17
SSBP4-207ENST00000600244 HHIPL2Q6UWX4 724 aa22.39■■□□□ 1.17
SSBP4-207ENST00000600244 GJD2Q9UKL4 321 aa22.39■■□□□ 1.17
SSBP4-207ENST00000600244 IQSEC3Q9UPP2 1182 aaPredicted RBP22.39■■□□□ 1.17
SSBP4-207ENST00000600244 AFG3L2Q9Y4W6 797 aa22.39■■□□□ 1.17
SSBP4-207ENST00000600244 ZHX2Q9Y6X8 837 aa22.39■■□□□ 1.17
SSBP4-207ENST00000600244 CCDC57Q2TAC2 916 aa22.38■■□□□ 1.17
SSBP4-207ENST00000600244 DNAAF4Q8WXU2 420 aa22.38■■□□□ 1.17
SSBP4-207ENST00000600244 SLC4A2P04920 1241 aa22.37■■□□□ 1.17
SSBP4-207ENST00000600244 DDX10Q13206 875 aaKnown RBP22.37■■□□□ 1.17
SSBP4-207ENST00000600244 GADL1Q6ZQY3 521 aa22.37■■□□□ 1.17
SSBP4-207ENST00000600244 ANKRD13CQ8N6S4 541 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms