RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 CLMNQ96JQ2 1002 aa13.47□□□□□ -0.25
SIN3B-210ENST00000599880 NEUROD6Q96NK8 337 aa13.47□□□□□ -0.25
SIN3B-210ENST00000599880 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.47□□□□□ -0.25
SIN3B-210ENST00000599880 CAPN15O75808 1086 aa13.46□□□□□ -0.25
SIN3B-210ENST00000599880 MKRN3Q13064 507 aaKnown RBP13.46□□□□□ -0.25
SIN3B-210ENST00000599880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.25
SIN3B-210ENST00000599880 NOP58Q9Y2X3 529 aaKnown RBP13.46□□□□□ -0.25
SIN3B-210ENST00000599880 MYO5AQ9Y4I1 1855 aaKnown RBP13.46□□□□□ -0.26
SIN3B-210ENST00000599880 RFX7Q2KHR2 1363 aa13.45□□□□□ -0.26
SIN3B-210ENST00000599880 CDK5RAP2Q96SN8 1893 aa13.45□□□□□ -0.26
SIN3B-210ENST00000599880 MAP3K9P80192 1104 aa13.45□□□□□ -0.26
SIN3B-210ENST00000599880 GORABQ5T7V8 394 aa13.45□□□□□ -0.26
SIN3B-210ENST00000599880 DCAF15Q66K64 600 aa13.45□□□□□ -0.26
SIN3B-210ENST00000599880 CDC42EP5Q6NZY7 148 aa13.45□□□□□ -0.26
SIN3B-210ENST00000599880 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.45□□□□□ -0.26
SIN3B-210ENST00000599880 DZIP1Q86YF9 867 aaKnown RBP13.45□□□□□ -0.26
SIN3B-210ENST00000599880 FAM151AQ8WW52 585 aa13.45□□□□□ -0.26
SIN3B-210ENST00000599880 FAM163AQ96GL9 167 aaPredicted RBP13.45□□□□□ -0.26
SIN3B-210ENST00000599880 C1orf115Q9H7X2 142 aa13.45□□□□□ -0.26
SIN3B-210ENST00000599880 CSADQ9Y600 493 aa13.45□□□□□ -0.26
SIN3B-210ENST00000599880 FOCADQ5VW36 1801 aa13.45□□□□□ -0.26
SIN3B-210ENST00000599880 SURF6O75683 361 aaKnown RBP13.44□□□□□ -0.26
SIN3B-210ENST00000599880 UQCRFS1P1P0C7P4 283 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 OS9Q13438 667 aaPredicted RBP13.44□□□□□ -0.26
SIN3B-210ENST00000599880 DGKZQ13574 1117 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 VGLL4Q14135 290 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 TNNI3KQ59H18 835 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 SPATA5Q8NB90 893 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 PANK1Q8TE04 598 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 OPTNQ96CV9 577 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 IDI2Q9BXS1 227 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 MCOLN1Q9GZU1 580 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 HMG20BQ9P0W2 317 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 ABCF2Q9UG63 623 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 FPGT-TNNI3KV9GXZ4 949 aa13.44□□□□□ -0.26
SIN3B-210ENST00000599880 MROH7-TTC4A0A0A0MT08 1334 aa13.43□□□□□ -0.26
SIN3B-210ENST00000599880 TESPA1A2RU30 521 aaPredicted RBP13.43□□□□□ -0.26
SIN3B-210ENST00000599880 IGSF3O75054 1194 aa13.43□□□□□ -0.26
SIN3B-210ENST00000599880 GJA5P36382 358 aa13.43□□□□□ -0.26
SIN3B-210ENST00000599880 MCAMP43121 646 aa13.43□□□□□ -0.26
SIN3B-210ENST00000599880 OTUD7BQ6GQQ9 843 aa13.43□□□□□ -0.26
SIN3B-210ENST00000599880 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
SIN3B-210ENST00000599880 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
SIN3B-210ENST00000599880 ZNF512BQ96KM6 892 aaPredicted RBP13.43□□□□□ -0.26
SIN3B-210ENST00000599880 ELP3Q9H9T3 547 aa13.43□□□□□ -0.26
SIN3B-210ENST00000599880 USP40Q9NVE5 1235 aa13.43□□□□□ -0.26
SIN3B-210ENST00000599880 DDX19BQ9UMR2 479 aa13.43□□□□□ -0.26
SIN3B-210ENST00000599880 DOCK1Q14185 1865 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 SPDYE5A6NIY4 337 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 GPR25O00155 361 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 IGF2BP3O00425 579 aaKnown RBP eCLIP13.42□□□□□ -0.26
SIN3B-210ENST00000599880 ENTPD3O75355 529 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 TBC1D8O95759 1140 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 MAP4K4O95819 1239 aaPredicted RBP13.42□□□□□ -0.26
SIN3B-210ENST00000599880 MECOMQ03112 1051 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 NFIAQ12857 509 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 CCDC158Q5M9N0 1113 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 WRNIP1Q96S55 665 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 ZNF341Q9BYN7 854 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 CHMP4BQ9H444 224 aaKnown RBP13.42□□□□□ -0.26
SIN3B-210ENST00000599880 FAM198AQ9UFP1 575 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 RCAN3Q9UKA8 241 aa13.42□□□□□ -0.26
SIN3B-210ENST00000599880 PTPRFP10586 1907 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 GPR75-ASB3A0A0A6YYF3 556 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
SIN3B-210ENST00000599880 GTF2A2P52657 109 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 GSTO1P78417 241 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 TCP10Q12799 353 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 PI16Q6UXB8 463 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 CTU1Q7Z7A3 348 aaKnown RBP13.41□□□□□ -0.26
SIN3B-210ENST00000599880 ERO1BQ86YB8 467 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 ERC1Q8IUD2 1116 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 ZNF296Q8WUU4 475 aaPredicted RBP13.41□□□□□ -0.26
SIN3B-210ENST00000599880 NSUN4Q96CB9 384 aaKnown RBP13.41□□□□□ -0.26
SIN3B-210ENST00000599880 MS4A4AQ96JQ5 239 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 DBNDD2Q9BQY9 259 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 SNCAIPQ9Y6H5 919 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 ATRNL1Q5VV63 1379 aa13.41□□□□□ -0.26
SIN3B-210ENST00000599880 COL2A1P02458 1487 aaPredicted RBP13.41□□□□□ -0.26
SIN3B-210ENST00000599880 LDHCP07864 332 aa13.4□□□□□ -0.26
SIN3B-210ENST00000599880 BTDP43251 543 aa13.4□□□□□ -0.26
SIN3B-210ENST00000599880 PKN2Q16513 984 aaKnown RBP13.4□□□□□ -0.26
SIN3B-210ENST00000599880 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
SIN3B-210ENST00000599880 TTC39AQ5SRH9 613 aa13.4□□□□□ -0.26
SIN3B-210ENST00000599880 RPAP2Q8IXW5 612 aaPredicted RBP13.4□□□□□ -0.26
SIN3B-210ENST00000599880 ZNF384Q8TF68 577 aa13.4□□□□□ -0.26
SIN3B-210ENST00000599880 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
SIN3B-210ENST00000599880 ZNF112Q9UJU3 913 aa13.4□□□□□ -0.26
SIN3B-210ENST00000599880 PHIPQ8WWQ0 1821 aa13.4□□□□□ -0.26
SIN3B-210ENST00000599880 ATAD5Q96QE3 1844 aa13.4□□□□□ -0.26
SIN3B-210ENST00000599880 FKTNO75072 461 aa13.39□□□□□ -0.27
SIN3B-210ENST00000599880 WDHD1O75717 1129 aaPredicted RBP13.39□□□□□ -0.27
SIN3B-210ENST00000599880 RGS3P49796 1198 aa13.39□□□□□ -0.27
SIN3B-210ENST00000599880 RHBDL3P58872 404 aa13.39□□□□□ -0.27
SIN3B-210ENST00000599880 PPIL2Q13356 520 aa13.39□□□□□ -0.27
SIN3B-210ENST00000599880 NOL9Q5SY16 702 aaKnown RBP13.39□□□□□ -0.27
SIN3B-210ENST00000599880 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
SIN3B-210ENST00000599880 PTPN18Q99952 460 aa13.39□□□□□ -0.27
SIN3B-210ENST00000599880 ZBTB40Q9NUA8 1239 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms