RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 A0A1B0GUL7 405 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 NEDD9Q14511 834 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 ERO1AQ96HE7 468 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 SAP30BPQ9UHR5 308 aaKnown RBP13.26□□□□□ -0.29
SCN8A-208ENST00000599343 CHMP2AO43633 222 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 PDE4DQ08499 809 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 GKAP1Q5VSY0 366 aaPredicted RBP13.26□□□□□ -0.29
SCN8A-208ENST00000599343 CCT6BQ92526 530 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 TBC1D8BQ0IIM8 1120 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 CLUL1Q15846 466 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 VPS52Q8N1B4 723 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 GPR161Q8N6U8 529 aaKnown RBP13.26□□□□□ -0.29
SCN8A-208ENST00000599343 WDR66Q8TBY9 1149 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 NDUFAB1O14561 156 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 SEC24BO95487 1268 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 CHMLP26374 656 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 FYB2Q5VWT5 728 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 MIPOL1Q8TD10 442 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 KIFC2Q96AC6 838 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 RPL13P26373 211 aaKnown RBP13.26□□□□□ -0.29
SCN8A-208ENST00000599343 ATP5DP30049 168 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 CARD6Q9BX69 1037 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 PPP1R12CQ9BZL4 782 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 FAM204AQ9H8W3 233 aa13.26□□□□□ -0.29
SCN8A-208ENST00000599343 ZNF131P52739 623 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 PSMD6Q15008 389 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 TMCO4Q5TGY1 634 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 RIOK3O14730 519 aaKnown RBP13.25□□□□□ -0.29
SCN8A-208ENST00000599343 PARP1P09874 1014 aaKnown RBP13.25□□□□□ -0.29
SCN8A-208ENST00000599343 IFT74Q96LB3 600 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 BUB1BO60566 1050 aaPredicted RBP13.25□□□□□ -0.29
SCN8A-208ENST00000599343 ASIC2Q16515 512 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 PLEKHM2Q8IWE5 1019 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 UTP11Q9Y3A2 253 aaKnown RBP13.25□□□□□ -0.29
SCN8A-208ENST00000599343 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCN8A-208ENST00000599343 PCF11O94913 1555 aaKnown RBP13.25□□□□□ -0.29
SCN8A-208ENST00000599343 KRT24Q2M2I5 525 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 WDR44Q5JSH3 913 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 EPSTI1Q96J88 318 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 ELF2Q15723 593 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 TAF12Q16514 161 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 CYP26C1Q6V0L0 522 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 B4GALNT4Q76KP1 1039 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 TSPYL6Q8N831 410 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 USP26Q9BXU7 913 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 GPCPD1Q9NPB8 672 aa13.25□□□□□ -0.29
SCN8A-208ENST00000599343 RBM28Q9NW13 759 aaKnown RBP13.25□□□□□ -0.29
SCN8A-208ENST00000599343 RALGAPBQ86X10 1494 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 MAP3K1Q13233 1512 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.24□□□□□ -0.29
SCN8A-208ENST00000599343 FAM170AA1A519 330 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 GOLGA6CA6NDK9 693 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 GOLGA6DP0CG33 693 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 RLBP1P12271 317 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 FNBP1Q96RU3 617 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 PPANQ9NQ55 473 aaKnown RBP13.24□□□□□ -0.29
SCN8A-208ENST00000599343 GOLGA6AQ9NYA3 693 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 GAS8O95995 478 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 DZIP3Q86Y13 1208 aaKnown RBP13.24□□□□□ -0.29
SCN8A-208ENST00000599343 MBD4O95243 580 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 ERCC3P19447 782 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 PIK3AP1Q6ZUJ8 805 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 BICC1Q9H694 974 aaKnown RBP13.24□□□□□ -0.29
SCN8A-208ENST00000599343 TOP2BQ02880 1626 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 IRS4O14654 1257 aaPredicted RBP13.24□□□□□ -0.29
SCN8A-208ENST00000599343 PPP2R5DQ14738 602 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 BEND3Q5T5X7 828 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 CACNA2D3Q8IZS8 1091 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 KIFAP3Q92845 792 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 ARHGEF2Q92974 986 aaKnown RBP13.24□□□□□ -0.29
SCN8A-208ENST00000599343 PSMB7Q99436 277 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 NESP48681 1621 aa13.24□□□□□ -0.29
SCN8A-208ENST00000599343 MAGI1Q96QZ7 1491 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-208ENST00000599343 B4E1Z4 1266 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 TUBBP07437 444 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 FMNL3Q8IVF7 1028 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 FEZ2Q9UHY8 353 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-208ENST00000599343 CCNT1O60563 726 aaKnown RBP13.23□□□□□ -0.29
SCN8A-208ENST00000599343 CEP120Q8N960 986 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 INTS4Q96HW7 963 aaKnown RBP13.23□□□□□ -0.29
SCN8A-208ENST00000599343 DCTPP1Q9H773 170 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 CCDC169A6NNP5 214 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 INPP5BP32019 993 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 CLNS1AP54105 237 aaKnown RBP13.23□□□□□ -0.29
SCN8A-208ENST00000599343 MTHFSDQ2M296 383 aaKnown RBP13.23□□□□□ -0.29
SCN8A-208ENST00000599343 AKAP4Q5JQC9 854 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 KLHL7Q8IXQ5 586 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
SCN8A-208ENST00000599343 SYNRGQ9UMZ2 1314 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 FANCCQ00597 558 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 SIRT1Q96EB6 747 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 HAUS7Q99871 368 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 SWAP70Q9UH65 585 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 STX10O60499 249 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms