RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 MBD4O95243 580 aa22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 CDC25BP30305 580 aa22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 CTDSPL2Q05D32 466 aa22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 AXDND1Q5T1B0 1012 aaPredicted RBP22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 ANO1Q5XXA6 986 aa22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 SYNE3Q6ZMZ3 975 aa22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 MYL10Q9BUA6 226 aa22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 LY9Q9HBG7 655 aa22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 TAOK2Q9UL54 1235 aa22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 ALX1Q15699 326 aa22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 ARMT1Q9H993 441 aa22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 FAM217BQ9NTX9 383 aaPredicted RBP22.8■■□□□ 1.24
GRAMD1A-207ENST00000598118 A0A0G2JS52 829 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 PATL2C9JE40 543 aaKnown RBP22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 UBE2Q2LH0YL09 131 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 NTRK3Q16288 839 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 AK7Q96M32 723 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 MPHOSPH8Q99549 860 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 BECN2A8MW95 431 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 RANBP6O60518 1105 aaKnown RBP22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 WDHD1O75717 1129 aaPredicted RBP22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 CRKLP46109 303 aaKnown RBP22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 KRT40Q6A162 431 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 ACSBG1Q96GR2 724 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 TMEM87BQ96K49 555 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 CCDC87Q9NVE4 849 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 ZSWIM5Q9P217 1185 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 PHLPP1O60346 1717 aa22.79■■□□□ 1.24
GRAMD1A-207ENST00000598118 PRKAB2O43741 272 aa22.78■■□□□ 1.24
GRAMD1A-207ENST00000598118 GTF2F1P35269 517 aaKnown RBP eCLIP22.78■■□□□ 1.243e-7■■■■□ 26.5
GRAMD1A-207ENST00000598118 AOPEPQ8N6M6 819 aa22.78■■□□□ 1.24
GRAMD1A-207ENST00000598118 MRFAP1L1Q96HT8 127 aa22.78■■□□□ 1.24
GRAMD1A-207ENST00000598118 UTP14AQ9BVJ6 771 aaKnown RBP22.78■■□□□ 1.24
GRAMD1A-207ENST00000598118 KIAA1468Q9P260 1216 aa22.78■■□□□ 1.24
GRAMD1A-207ENST00000598118 BCAMP50895 628 aa22.78■■□□□ 1.24
GRAMD1A-207ENST00000598118 MAP3K12Q12852 859 aa22.78■■□□□ 1.24
GRAMD1A-207ENST00000598118 ARID5BQ14865 1188 aa22.78■■□□□ 1.24
GRAMD1A-207ENST00000598118 VPS37DQ86XT2 251 aa22.78■■□□□ 1.24
GRAMD1A-207ENST00000598118 CEP57L1Q8IYX8 460 aa22.78■■□□□ 1.24
GRAMD1A-207ENST00000598118 MROH7-TTC4A0A0A0MT08 1334 aa22.77■■□□□ 1.24
GRAMD1A-207ENST00000598118 GSG1L2A8MUP6 293 aa22.77■■□□□ 1.24
GRAMD1A-207ENST00000598118 ZBTB43O43298 467 aa22.77■■□□□ 1.24
GRAMD1A-207ENST00000598118 CAMTA2O94983 1202 aa22.77■■□□□ 1.24
GRAMD1A-207ENST00000598118 ZNF202O95125 648 aa22.77■■□□□ 1.24
GRAMD1A-207ENST00000598118 MARCKSP29966 332 aaPredicted RBP22.77■■□□□ 1.24
GRAMD1A-207ENST00000598118 ATP6V1AP38606 617 aa22.77■■□□□ 1.24
GRAMD1A-207ENST00000598118 TMEM67Q5HYA8 995 aa22.77■■□□□ 1.24
GRAMD1A-207ENST00000598118 NAPBQ9H115 298 aa22.77■■□□□ 1.24
GRAMD1A-207ENST00000598118 SLC39A14Q15043 492 aa22.77■■□□□ 1.23
GRAMD1A-207ENST00000598118 DPCR1Q3MIW9 517 aa22.77■■□□□ 1.23
GRAMD1A-207ENST00000598118 NFXL1Q6ZNB6 911 aa22.77■■□□□ 1.23
GRAMD1A-207ENST00000598118 SGMS1Q86VZ5 419 aa22.77■■□□□ 1.23
GRAMD1A-207ENST00000598118 COL4A1P02462 1669 aa22.76■■□□□ 1.23
GRAMD1A-207ENST00000598118 CDKL5O76039 1030 aa22.75■■□□□ 1.23
GRAMD1A-207ENST00000598118 PFKFB1P16118 471 aa22.75■■□□□ 1.23
GRAMD1A-207ENST00000598118 ITPK1Q13572 414 aa22.75■■□□□ 1.23
GRAMD1A-207ENST00000598118 LCORLQ8N3X6 602 aa22.75■■□□□ 1.23
GRAMD1A-207ENST00000598118 ROBO1Q9Y6N7 1651 aa22.75■■□□□ 1.23
GRAMD1A-207ENST00000598118 GOLGA8AA7E2F4 631 aa22.75■■□□□ 1.23
GRAMD1A-207ENST00000598118 CMA1P23946 247 aa22.75■■□□□ 1.23
GRAMD1A-207ENST00000598118 RGS22Q8NE09 1264 aa22.75■■□□□ 1.23
GRAMD1A-207ENST00000598118 LRRC8AQ8IWT6 810 aa22.74■■□□□ 1.23
GRAMD1A-207ENST00000598118 UBE2Q2Q8WVN8 375 aa22.74■■□□□ 1.23
GRAMD1A-207ENST00000598118 BCORQ6W2J9 1755 aa22.74■■□□□ 1.23
GRAMD1A-207ENST00000598118 IFIT3O14879 490 aaKnown RBP22.74■■□□□ 1.23
GRAMD1A-207ENST00000598118 IARSP41252 1262 aaKnown RBP22.74■■□□□ 1.23
GRAMD1A-207ENST00000598118 LIFRP42702 1097 aa22.74■■□□□ 1.23
GRAMD1A-207ENST00000598118 AKNAD1Q5T1N1 836 aa22.74■■□□□ 1.23
GRAMD1A-207ENST00000598118 COL22A1Q8NFW1 1626 aaPredicted RBP22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 LOC102724428A0A0B4J2F2 783 aa22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 BIN1O00499 593 aa22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 NTSR2O95665 410 aa22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 SIK1P57059 783 aa22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 PTPAQ15257 358 aa22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 CPLX2Q6PUV4 134 aaKnown RBP22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 NIP7Q9Y221 180 aaKnown RBP eCLIP22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 TIAM2Q8IVF5 1701 aa22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 RIOK3O14730 519 aaKnown RBP22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 SLC3A2P08195 630 aaKnown RBP22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 DDB1Q16531 1140 aa22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 CCDC152Q4G0S7 254 aa22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 ZNF710Q8N1W2 664 aa22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 MAP3K14Q99558 947 aa22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 NAT10Q9H0A0 1025 aaKnown RBP22.73■■□□□ 1.23
GRAMD1A-207ENST00000598118 STK11IPQ8N1F8 1099 aa22.72■■□□□ 1.23
GRAMD1A-207ENST00000598118 MARCH10Q8NA82 808 aaPredicted RBP22.72■■□□□ 1.23
GRAMD1A-207ENST00000598118 MIGA1Q8NAN2 632 aa22.72■■□□□ 1.23
GRAMD1A-207ENST00000598118 ZKSCAN3Q9BRR0 538 aa22.72■■□□□ 1.23
GRAMD1A-207ENST00000598118 SLC12A7Q9Y666 1083 aa22.72■■□□□ 1.23
GRAMD1A-207ENST00000598118 U2AF2P26368 475 aaKnown RBP eCLIP22.71■■□□□ 1.23
GRAMD1A-207ENST00000598118 CHRNDQ07001 517 aa22.71■■□□□ 1.23
GRAMD1A-207ENST00000598118 SHC4Q6S5L8 630 aa22.71■■□□□ 1.23
GRAMD1A-207ENST00000598118 C16orf45Q96MC5 204 aaPredicted RBP22.71■■□□□ 1.23
GRAMD1A-207ENST00000598118 SLC26A6Q9BXS9 759 aa22.71■■□□□ 1.23
GRAMD1A-207ENST00000598118 SLC4A4Q9Y6R1 1079 aa22.71■■□□□ 1.23
GRAMD1A-207ENST00000598118 TAF1P21675 1872 aa22.71■■□□□ 1.23
GRAMD1A-207ENST00000598118 RREB1Q92766 1687 aa22.71■■□□□ 1.23
GRAMD1A-207ENST00000598118 SPATA31A1Q5TZJ5 1347 aa22.71■■□□□ 1.23
GRAMD1A-207ENST00000598118 IGHMBP2P38935 993 aaKnown RBP22.71■■□□□ 1.23
GRAMD1A-207ENST00000598118 PARP10Q53GL7 1025 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms