RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 TESPA1A2RU30 521 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 GJA5P36382 358 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 KCNJ4P48050 445 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 RGS3P49796 1198 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 PUM3Q15397 648 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 ATP2B3Q16720 1220 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 TNNI3KQ59H18 835 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 SLC10A4Q96EP9 437 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 CLMNQ96JQ2 1002 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 HTATIP2Q9BUP3 242 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 ZC3H12CQ9C0D7 883 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 GPR108Q9NPR9 543 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 PODXL2Q9NZ53 605 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 MINPP1Q9UNW1 487 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 FPGT-TNNI3KV9GXZ4 949 aa14.73□□□□□ -0.05
SHKBP1-213ENST00000597325 ARAP2Q8WZ64 1704 aa14.72□□□□□ -0.05
SHKBP1-213ENST00000597325 PDE8BO95263 885 aa14.72□□□□□ -0.05
SHKBP1-213ENST00000597325 SLC5A1P13866 664 aa14.72□□□□□ -0.05
SHKBP1-213ENST00000597325 MTFR1Q15390 333 aa14.72□□□□□ -0.05
SHKBP1-213ENST00000597325 OTUD7BQ6GQQ9 843 aa14.72□□□□□ -0.05
SHKBP1-213ENST00000597325 HELBQ8NG08 1087 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-213ENST00000597325 ANKIB1Q9P2G1 1089 aa14.72□□□□□ -0.05
SHKBP1-213ENST00000597325 ZSWIM8A7E2V4 1837 aa14.71□□□□□ -0.05
SHKBP1-213ENST00000597325 XDHP47989 1333 aa14.71□□□□□ -0.05
SHKBP1-213ENST00000597325 A0A1B0GUL7 405 aa14.71□□□□□ -0.05
SHKBP1-213ENST00000597325 TAF5LO75529 589 aa14.71□□□□□ -0.05
SHKBP1-213ENST00000597325 MX1P20591 662 aa14.71□□□□□ -0.05
SHKBP1-213ENST00000597325 VGLL2Q8N8G2 317 aa14.71□□□□□ -0.05
SHKBP1-213ENST00000597325 NEUROD6Q96NK8 337 aa14.71□□□□□ -0.05
SHKBP1-213ENST00000597325 STAP2Q9UGK3 403 aa14.71□□□□□ -0.05
SHKBP1-213ENST00000597325 SSC5DA1L4H1 1573 aa14.71□□□□□ -0.05
SHKBP1-213ENST00000597325 TTC28Q96AY4 2481 aa14.7□□□□□ -0.06
SHKBP1-213ENST00000597325 IFIT1P09914 478 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-213ENST00000597325 PDE4AP27815 886 aa14.7□□□□□ -0.06
SHKBP1-213ENST00000597325 ARHGEF6Q15052 776 aa14.7□□□□□ -0.06
SHKBP1-213ENST00000597325 GORABQ5T7V8 394 aa14.7□□□□□ -0.06
SHKBP1-213ENST00000597325 LPIN2Q92539 896 aa14.7□□□□□ -0.06
SHKBP1-213ENST00000597325 EAF2Q96CJ1 260 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-213ENST00000597325 CCDC8Q9H0W5 538 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-213ENST00000597325 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-213ENST00000597325 UNCXA6NJT0 531 aa14.69□□□□□ -0.06
SHKBP1-213ENST00000597325 GJA8P48165 433 aa14.69□□□□□ -0.06
SHKBP1-213ENST00000597325 UBE4AQ14139 1066 aa14.69□□□□□ -0.06
SHKBP1-213ENST00000597325 SKAP1Q86WV1 359 aa14.69□□□□□ -0.06
SHKBP1-213ENST00000597325 AOX1Q06278 1338 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 TTC41PQ6P2S7 1318 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 USP17L3A6NCW0 530 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 USP17L4A6NCW7 530 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 UFL1O94874 794 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 ATP2B4P23634 1241 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 BMP8BP34820 402 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 USP17L1Q7RTZ2 530 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 NKX2-3Q8TAU0 364 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 OTUD7AQ8TE49 926 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 ECHDC1Q9NTX5 307 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 TLR7Q9NYK1 1049 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 GGA1Q9UJY5 639 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 LEMD3Q9Y2U8 911 aa14.68□□□□□ -0.06
SHKBP1-213ENST00000597325 ZNF804BA4D1E1 1349 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 ERC2O15083 957 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 COL9A1P20849 921 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 FGFR2P21802 821 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 PDE1AP54750 535 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 TIMM10P62072 90 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 LRIT3Q3SXY7 679 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 CCDC158Q5M9N0 1113 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 APOBEC3FQ8IUX4 373 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 PLEKHM2Q8IWE5 1019 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 XAGE2Q96GT9 111 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 MS4A4AQ96JQ5 239 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 GDF15Q99988 308 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 DBNDD2Q9BQY9 259 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 ARHGAP39Q9C0H5 1083 aa14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 DBNLQ9UJU6 430 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 COL1A1P02452 1464 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-213ENST00000597325 SALL3Q9BXA9 1300 aa14.66□□□□□ -0.06
SHKBP1-213ENST00000597325 G3V3G9 751 aa14.66□□□□□ -0.06
SHKBP1-213ENST00000597325 CAVIN4Q5BKX8 364 aa14.66□□□□□ -0.06
SHKBP1-213ENST00000597325 TTC39AQ5SRH9 613 aa14.66□□□□□ -0.06
SHKBP1-213ENST00000597325 DCAF8Q5TAQ9 597 aa14.66□□□□□ -0.06
SHKBP1-213ENST00000597325 PODNQ7Z5L7 613 aa14.66□□□□□ -0.06
SHKBP1-213ENST00000597325 VPS37DQ86XT2 251 aa14.66□□□□□ -0.06
SHKBP1-213ENST00000597325 ZBED3Q96IU2 234 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-213ENST00000597325 DNAH12Q6ZR08 3092 aa14.65□□□□□ -0.06
SHKBP1-213ENST00000597325 GLRX3O76003 335 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-213ENST00000597325 GJB1P08034 283 aa14.65□□□□□ -0.06
SHKBP1-213ENST00000597325 ADORA1P30542 326 aa14.65□□□□□ -0.06
SHKBP1-213ENST00000597325 DACT2Q5SW24 774 aa14.65□□□□□ -0.06
SHKBP1-213ENST00000597325 MXD3Q9BW11 206 aa14.65□□□□□ -0.06
SHKBP1-213ENST00000597325 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-213ENST00000597325 ALPK3Q96L96 1907 aa14.64□□□□□ -0.07
SHKBP1-213ENST00000597325 SNAP23O00161 211 aa14.64□□□□□ -0.07
SHKBP1-213ENST00000597325 TSHZ3Q63HK5 1081 aa14.64□□□□□ -0.07
SHKBP1-213ENST00000597325 OGFOD1Q8N543 542 aa14.64□□□□□ -0.07
SHKBP1-213ENST00000597325 DEFB129Q9H1M3 183 aa14.64□□□□□ -0.07
SHKBP1-213ENST00000597325 OSBPL3Q9H4L5 887 aa14.64□□□□□ -0.07
SHKBP1-213ENST00000597325 GNL3LQ9NVN8 582 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-213ENST00000597325 MED23Q9ULK4 1368 aa14.63□□□□□ -0.07
SHKBP1-213ENST00000597325 PPP1R12BO60237 982 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-213ENST00000597325 EVI5O60447 810 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms