RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 NSUN4Q96CB9 384 aaKnown RBP13.77□□□□□ -0.21
SH2D3A-206ENST00000597254 LSG1Q9H089 658 aaKnown RBP13.77□□□□□ -0.21
SH2D3A-206ENST00000597254 ANO2Q9NQ90 1003 aa13.77□□□□□ -0.21
SH2D3A-206ENST00000597254 ZBTB12Q9Y330 459 aaPredicted RBP13.77□□□□□ -0.21
SH2D3A-206ENST00000597254 MAST3O60307 1309 aa13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 USP17L3A6NCW0 530 aa13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 USP17L4A6NCW7 530 aa13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 RPS12P25398 132 aaKnown RBP13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 PTH1RQ03431 593 aa13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 FMR1Q06787 632 aaKnown RBP eCLIP13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 TMED8Q6PL24 325 aaPredicted RBP13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 PAXIP1Q6ZW49 1069 aaPredicted RBP13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 USP17L1Q7RTZ2 530 aa13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 ZNF384Q8TF68 577 aa13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 AIDAQ96BJ3 306 aa13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 C22orf23Q9BZE7 217 aa13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 SUGT1Q9Y2Z0 365 aa13.76□□□□□ -0.21
SH2D3A-206ENST00000597254 CCDC171Q6TFL3 1326 aa13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 LDHCP07864 332 aa13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 DACT2Q5SW24 774 aa13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 DZIP1Q86YF9 867 aaKnown RBP13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 CERS5Q8N5B7 392 aa13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 MAP4K1Q92918 833 aa13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 MXD3Q9BW11 206 aa13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 PGAP2Q9UHJ9 254 aa13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 TRPM7Q96QT4 1865 aa13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 PCNTO95613 3336 aa13.75□□□□□ -0.21
SH2D3A-206ENST00000597254 SHTN1A0MZ66 631 aa13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 GPAA1O43292 621 aa13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 CELF2O95319 508 aaKnown RBP13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 ECE1P42892 770 aa13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 HIRAP54198 1017 aaPredicted RBP13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 GSTO1P78417 241 aa13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 CST9Q5W186 159 aa13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 CDC37L1Q7L3B6 337 aa13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 ADGRA1Q86SQ6 560 aa13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 TBC1D32Q96NH3 1257 aa13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 STRBPQ96SI9 672 aaKnown RBP13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 GLIS2Q9BZE0 524 aaPredicted RBP13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 SCN9AQ15858 1988 aa13.74□□□□□ -0.21
SH2D3A-206ENST00000597254 WDR33Q9C0J8 1336 aaKnown RBP13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 MAGEB6P1A0A0J9YX57 407 aa13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 FOXN1O15353 648 aa13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 MBD4O95243 580 aa13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 VIL1P09327 827 aaKnown RBP13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 HSPD1P10809 573 aaKnown RBP13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 RBM25P49756 843 aaKnown RBP13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 GRM1Q13255 1194 aa13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 TBC1D10BQ4KMP7 808 aaPredicted RBP13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 SAMD7Q7Z3H4 446 aa13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 MIGA1Q8NAN2 632 aa13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 DSCC1Q9BVC3 393 aa13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 ZNF408Q9H9D4 720 aa13.73□□□□□ -0.21
SH2D3A-206ENST00000597254 F8W031 263 aaPredicted RBP13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 DYNLL1P63167 89 aaKnown RBP13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 MAP2K1Q02750 393 aaPredicted RBP13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 NECTIN1Q15223 517 aa13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 VPS53Q5VIR6 699 aa13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 SLF2Q8IX21 1173 aa13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 CAPNS2Q96L46 248 aa13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 ARMT1Q9H993 441 aa13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 WBP1LQ9NX94 342 aa13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 TTF2Q9UNY4 1162 aaKnown RBP13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 RBM8AQ9Y5S9 174 aaKnown RBP13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 TLL2Q9Y6L7 1015 aa13.72□□□□□ -0.21
SH2D3A-206ENST00000597254 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 MCCP23508 829 aa13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 HSPA4P34932 840 aa13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 PPP4CP60510 307 aa13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 DIXDC1Q155Q3 683 aa13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 RSBN1LQ6PCB5 846 aaPredicted RBP13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 USP48Q86UV5 1035 aa13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 LCORLQ8N3X6 602 aa13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 DCPSQ96C86 337 aaKnown RBP13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 RIOK1Q9BRS2 568 aaKnown RBP13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 MRIQ9BWK5 157 aa13.71□□□□□ -0.21
SH2D3A-206ENST00000597254 ZNF646O15015 1829 aaPredicted RBP13.71□□□□□ -0.22
SH2D3A-206ENST00000597254 MAST2Q6P0Q8 1798 aa13.71□□□□□ -0.22
SH2D3A-206ENST00000597254 MROH7-TTC4A0A0A0MT08 1334 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 PSME4Q14997 1843 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 GPR75-ASB3A0A0A6YYF3 556 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 GNAT2P19087 354 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 KIF4BQ2VIQ3 1234 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 CYP4F22Q6NT55 531 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 KRT26Q7Z3Y9 468 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 KIAA0825Q8IV33 1275 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 AGBL3Q8NEM8 1001 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 BEGAINQ9BUH8 593 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 AATFQ9NY61 560 aaKnown RBP eCLIP13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 SLC4A4Q9Y6R1 1079 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 MYH2Q9UKX2 1941 aa13.7□□□□□ -0.22
SH2D3A-206ENST00000597254 GAKO14976 1311 aa13.69□□□□□ -0.22
SH2D3A-206ENST00000597254 MYO3BQ8WXR4 1341 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms