RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 ADCY3O60266 1144 aa19.72■□□□□ 0.75
LIG1-214ENST00000597146 TFRCP02786 760 aaKnown RBP19.72■□□□□ 0.75
LIG1-214ENST00000597146 CYP2C8P10632 490 aa19.72■□□□□ 0.75
LIG1-214ENST00000597146 BCRP11274 1271 aa19.72■□□□□ 0.75
LIG1-214ENST00000597146 FOXO4P98177 505 aa19.72■□□□□ 0.75
LIG1-214ENST00000597146 MIGA2Q7L4E1 593 aa19.72■□□□□ 0.75
LIG1-214ENST00000597146 C7orf61Q8IZ16 206 aa19.72■□□□□ 0.75
LIG1-214ENST00000597146 PAWRQ96IZ0 340 aaKnown RBP19.72■□□□□ 0.75
LIG1-214ENST00000597146 MYH16Q9H6N6 1097 aa19.72■□□□□ 0.75
LIG1-214ENST00000597146 MYBBP1AQ9BQG0 1328 aaKnown RBP19.72■□□□□ 0.75
LIG1-214ENST00000597146 SPTBN5Q9NRC6 3674 aaKnown RBP19.72■□□□□ 0.75
LIG1-214ENST00000597146 MTMR10Q9NXD2 777 aa19.71■□□□□ 0.75
LIG1-214ENST00000597146 EYSQ5T1H1 3165 aa19.71■□□□□ 0.75
LIG1-214ENST00000597146 RPAP1Q9BWH6 1393 aaPredicted RBP19.7■□□□□ 0.74
LIG1-214ENST00000597146 MYH13Q9UKX3 1938 aa19.7■□□□□ 0.74
LIG1-214ENST00000597146 APAF1O14727 1248 aa19.7■□□□□ 0.74
LIG1-214ENST00000597146 HIBADHP31937 336 aaKnown RBP19.7■□□□□ 0.74
LIG1-214ENST00000597146 BMP8BP34820 402 aa19.7■□□□□ 0.74
LIG1-214ENST00000597146 BCAMP50895 628 aa19.7■□□□□ 0.74
LIG1-214ENST00000597146 CALD1Q05682 793 aaKnown RBP19.7■□□□□ 0.74
LIG1-214ENST00000597146 TSR2Q969E8 191 aaKnown RBP19.7■□□□□ 0.74
LIG1-214ENST00000597146 PARK7Q99497 189 aaKnown RBP19.7■□□□□ 0.74
LIG1-214ENST00000597146 IQSEC3Q9UPP2 1182 aaPredicted RBP19.7■□□□□ 0.74
LIG1-214ENST00000597146 KCNH4Q9UQ05 1017 aa19.7■□□□□ 0.74
LIG1-214ENST00000597146 CACNA1FO60840 1977 aa19.7■□□□□ 0.74
LIG1-214ENST00000597146 LAMA2P24043 3122 aaKnown RBP19.69■□□□□ 0.74
LIG1-214ENST00000597146 FLT3LGP49771 235 aa19.69■□□□□ 0.74
LIG1-214ENST00000597146 LDHAL6AQ6ZMR3 332 aa19.69■□□□□ 0.74
LIG1-214ENST00000597146 FAM84BQ96KN1 310 aaPredicted RBP19.69■□□□□ 0.74
LIG1-214ENST00000597146 CHMP4AQ9BY43 222 aa19.69■□□□□ 0.74
LIG1-214ENST00000597146 ZNF341Q9BYN7 854 aa19.69■□□□□ 0.74
LIG1-214ENST00000597146 PAK6Q9NQU5 681 aaPredicted RBP19.69■□□□□ 0.74
LIG1-214ENST00000597146 CNNM1Q9NRU3 951 aa19.69■□□□□ 0.74
LIG1-214ENST00000597146 DOCK2Q92608 1830 aa19.69■□□□□ 0.74
LIG1-214ENST00000597146 SLC4A2P04920 1241 aa19.68■□□□□ 0.74
LIG1-214ENST00000597146 SYN1P17600 705 aa19.68■□□□□ 0.74
LIG1-214ENST00000597146 CHAF1AQ13111 956 aaPredicted RBP19.68■□□□□ 0.74
LIG1-214ENST00000597146 EPHA10Q5JZY3 1008 aa19.68■□□□□ 0.74
LIG1-214ENST00000597146 DCAF15Q66K64 600 aa19.68■□□□□ 0.74
LIG1-214ENST00000597146 FAM83AQ86UY5 434 aa19.68■□□□□ 0.74
LIG1-214ENST00000597146 LINS1Q8NG48 757 aa19.68■□□□□ 0.74
LIG1-214ENST00000597146 DNAAF4Q8WXU2 420 aa19.68■□□□□ 0.74
LIG1-214ENST00000597146 TEKT1Q969V4 418 aa19.68■□□□□ 0.74
LIG1-214ENST00000597146 TMOD2Q9NZR1 351 aa19.68■□□□□ 0.74
LIG1-214ENST00000597146 FLIIQ13045 1269 aa19.67■□□□□ 0.74
LIG1-214ENST00000597146 LRIT3Q3SXY7 679 aa19.67■□□□□ 0.74
LIG1-214ENST00000597146 TAF7LQ5H9L4 462 aa19.67■□□□□ 0.74
LIG1-214ENST00000597146 GPAT2Q6NUI2 795 aa19.67■□□□□ 0.74
LIG1-214ENST00000597146 LMBR1LQ6UX01 489 aa19.67■□□□□ 0.74
LIG1-214ENST00000597146 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.67■□□□□ 0.74
LIG1-214ENST00000597146 HOOK2Q96ED9 719 aa19.67■□□□□ 0.74
LIG1-214ENST00000597146 CRISPLD2Q9H0B8 497 aa19.67■□□□□ 0.74
LIG1-214ENST00000597146 MAGEA10P43363 369 aaPredicted RBP19.66■□□□□ 0.74
LIG1-214ENST00000597146 FKBP5Q13451 457 aaPredicted RBP19.66■□□□□ 0.74
LIG1-214ENST00000597146 NECAB2Q7Z6G3 386 aa19.66■□□□□ 0.74
LIG1-214ENST00000597146 TAOK2Q9UL54 1235 aa19.66■□□□□ 0.74
LIG1-214ENST00000597146 PHIPQ8WWQ0 1821 aa19.65■□□□□ 0.74
LIG1-214ENST00000597146 HDLBPQ00341 1268 aaKnown RBP19.65■□□□□ 0.74
LIG1-214ENST00000597146 UBE4AQ14139 1066 aa19.65■□□□□ 0.74
LIG1-214ENST00000597146 APOBEC3HQ6NTF7 200 aaKnown RBP19.65■□□□□ 0.74
LIG1-214ENST00000597146 TDHQ8IZJ6 230 aa19.65■□□□□ 0.74
LIG1-214ENST00000597146 ZDHHC15Q96MV8 337 aa19.65■□□□□ 0.74
LIG1-214ENST00000597146 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.73
LIG1-214ENST00000597146 TNPO2O14787 897 aaKnown RBP19.64■□□□□ 0.73
LIG1-214ENST00000597146 CCDC57Q2TAC2 916 aa19.64■□□□□ 0.73
LIG1-214ENST00000597146 PXYLP1Q8TE99 480 aa19.64■□□□□ 0.73
LIG1-214ENST00000597146 DOCK1Q14185 1865 aa19.63■□□□□ 0.73
LIG1-214ENST00000597146 IRF5Q13568 498 aa19.63■□□□□ 0.73
LIG1-214ENST00000597146 TWISTNBQ3B726 338 aaPredicted RBP19.63■□□□□ 0.73
LIG1-214ENST00000597146 FKBP1CQ5VVH2 108 aa19.63■□□□□ 0.73
LIG1-214ENST00000597146 PUS3Q9BZE2 481 aaKnown RBP19.63■□□□□ 0.73
LIG1-214ENST00000597146 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.63■□□□□ 0.73
LIG1-214ENST00000597146 ZNF112Q9UJU3 913 aa19.63■□□□□ 0.73
LIG1-214ENST00000597146 NOL9Q5SY16 702 aaKnown RBP19.62■□□□□ 0.73
LIG1-214ENST00000597146 PRKRIP1Q9H875 184 aaPredicted RBP19.62■□□□□ 0.73
LIG1-214ENST00000597146 PRUNE2Q8WUY3 3088 aa19.61■□□□□ 0.73
LIG1-214ENST00000597146 TCP10Q12799 353 aa19.61■□□□□ 0.73
LIG1-214ENST00000597146 VPS37DQ86XT2 251 aa19.61■□□□□ 0.73
LIG1-214ENST00000597146 TBC1D22AQ8WUA7 517 aa19.61■□□□□ 0.73
LIG1-214ENST00000597146 UBE2OQ9C0C9 1292 aaKnown RBP19.61■□□□□ 0.73
LIG1-214ENST00000597146 PLXNB2O15031 1838 aa19.6■□□□□ 0.73
LIG1-214ENST00000597146 RPTORQ8N122 1335 aa19.6■□□□□ 0.73
LIG1-214ENST00000597146 FRAT2O75474 233 aaPredicted RBP19.6■□□□□ 0.73
LIG1-214ENST00000597146 CAPN2P17655 700 aa19.6■□□□□ 0.73
LIG1-214ENST00000597146 FBXO33Q7Z6M2 555 aa19.6■□□□□ 0.73
LIG1-214ENST00000597146 F6X3S4 739 aa19.59■□□□□ 0.73
LIG1-214ENST00000597146 GADL1Q6ZQY3 521 aa19.59■□□□□ 0.73
LIG1-214ENST00000597146 FAM151AQ8WW52 585 aa19.59■□□□□ 0.73
LIG1-214ENST00000597146 GUCD1Q96NT3 240 aa19.59■□□□□ 0.73
LIG1-214ENST00000597146 A0A0G2JLL6 359 aaPredicted RBP19.58■□□□□ 0.72
LIG1-214ENST00000597146 CXCL11O14625 94 aa19.58■□□□□ 0.72
LIG1-214ENST00000597146 NFIAQ12857 509 aa19.58■□□□□ 0.72
LIG1-214ENST00000597146 PRRT2Q7Z6L0 340 aaPredicted RBP19.58■□□□□ 0.72
LIG1-214ENST00000597146 ANKLE1Q8NAG6 615 aa19.58■□□□□ 0.72
LIG1-214ENST00000597146 TTC28Q96AY4 2481 aa19.58■□□□□ 0.72
LIG1-214ENST00000597146 MAST3O60307 1309 aa19.57■□□□□ 0.72
LIG1-214ENST00000597146 TRIM32Q13049 653 aa19.57■□□□□ 0.72
LIG1-214ENST00000597146 BEND3Q5T5X7 828 aa19.57■□□□□ 0.72
LIG1-214ENST00000597146 SMCR8Q8TEV9 937 aaPredicted RBP19.57■□□□□ 0.72
LIG1-214ENST00000597146 FAM161BQ96MY7 647 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms