RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 TMEM88BA6NKF7 163 aa17.43■□□□□ 0.38
LIG1-208ENST00000595758 TCP10L2B9ZVM9 353 aa17.43■□□□□ 0.38
LIG1-208ENST00000595758 CELF2O95319 508 aaKnown RBP17.43■□□□□ 0.38
LIG1-208ENST00000595758 CYP7A1P22680 504 aa17.43■□□□□ 0.38
LIG1-208ENST00000595758 CACNB3P54284 484 aa17.43■□□□□ 0.38
LIG1-208ENST00000595758 TNFAIP1Q13829 316 aa17.43■□□□□ 0.38
LIG1-208ENST00000595758 PRAMEF18Q5VWM3 479 aa17.43■□□□□ 0.38
LIG1-208ENST00000595758 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
LIG1-208ENST00000595758 NOL10Q9BSC4 688 aaKnown RBP17.43■□□□□ 0.38
LIG1-208ENST00000595758 ZNF408Q9H9D4 720 aa17.43■□□□□ 0.38
LIG1-208ENST00000595758 TNNI2P48788 182 aa17.42■□□□□ 0.38
LIG1-208ENST00000595758 PDE1AP54750 535 aa17.42■□□□□ 0.38
LIG1-208ENST00000595758 RASA3Q14644 834 aa17.42■□□□□ 0.38
LIG1-208ENST00000595758 FKBP1CQ5VVH2 108 aa17.42■□□□□ 0.38
LIG1-208ENST00000595758 CST9Q5W186 159 aa17.42■□□□□ 0.38
LIG1-208ENST00000595758 TMED8Q6PL24 325 aaPredicted RBP17.42■□□□□ 0.38
LIG1-208ENST00000595758 PI4K2BQ8TCG2 481 aa17.42■□□□□ 0.38
LIG1-208ENST00000595758 PPP2R3BQ9Y5P8 575 aa17.42■□□□□ 0.38
LIG1-208ENST00000595758 MYH2Q9UKX2 1941 aa17.42■□□□□ 0.38
LIG1-208ENST00000595758 BAG3O95817 575 aa17.41■□□□□ 0.38
LIG1-208ENST00000595758 SLC9C2Q5TAH2 1124 aa17.41■□□□□ 0.38
LIG1-208ENST00000595758 CREBZFQ9NS37 354 aa17.41■□□□□ 0.38
LIG1-208ENST00000595758 MAP4K4O95819 1239 aaPredicted RBP17.4■□□□□ 0.38
LIG1-208ENST00000595758 PDE6AP16499 860 aa17.4■□□□□ 0.38
LIG1-208ENST00000595758 ADGRA1Q86SQ6 560 aa17.4■□□□□ 0.38
LIG1-208ENST00000595758 FAM83AQ86UY5 434 aa17.4■□□□□ 0.38
LIG1-208ENST00000595758 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.4■□□□□ 0.384e-7■■■■□ 25.5
LIG1-208ENST00000595758 ECM29Q5VYK3 1845 aa17.4■□□□□ 0.38
LIG1-208ENST00000595758 PLCG2P16885 1265 aa17.39■□□□□ 0.37
LIG1-208ENST00000595758 NF2P35240 595 aa17.39■□□□□ 0.37
LIG1-208ENST00000595758 RHBDL3P58872 404 aa17.39■□□□□ 0.37
LIG1-208ENST00000595758 PPP4CP60510 307 aa17.39■□□□□ 0.37
LIG1-208ENST00000595758 PLEKHM2Q8IWE5 1019 aa17.39■□□□□ 0.37
LIG1-208ENST00000595758 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
LIG1-208ENST00000595758 TMEM39BQ9GZU3 492 aa17.39■□□□□ 0.37
LIG1-208ENST00000595758 AATFQ9NY61 560 aaKnown RBP eCLIP17.39■□□□□ 0.37
LIG1-208ENST00000595758 MYO5AQ9Y4I1 1855 aaKnown RBP17.39■□□□□ 0.37
LIG1-208ENST00000595758 HTRA3P83110 453 aa17.38■□□□□ 0.37
LIG1-208ENST00000595758 NFIAQ12857 509 aa17.38■□□□□ 0.37
LIG1-208ENST00000595758 SUPT20HL1Q3ZLR7 823 aa17.38■□□□□ 0.37
LIG1-208ENST00000595758 ZSCAN25Q6NSZ9 544 aa17.38■□□□□ 0.37
LIG1-208ENST00000595758 CENPQQ7L2Z9 268 aaPredicted RBP17.38■□□□□ 0.37
LIG1-208ENST00000595758 C2orf69Q8N8R5 385 aa17.38■□□□□ 0.37
LIG1-208ENST00000595758 KBTBD3Q8NAB2 608 aa17.38■□□□□ 0.37
LIG1-208ENST00000595758 MIGA1Q8NAN2 632 aa17.38■□□□□ 0.37
LIG1-208ENST00000595758 IDI2Q9BXS1 227 aa17.38■□□□□ 0.37
LIG1-208ENST00000595758 GBA2Q9HCG7 927 aaPredicted RBP17.38■□□□□ 0.37
LIG1-208ENST00000595758 ABT1Q9ULW3 272 aaKnown RBP17.38■□□□□ 0.37
LIG1-208ENST00000595758 ZNF532Q9HCE3 1301 aa17.38■□□□□ 0.37
LIG1-208ENST00000595758 CNTNAP1P78357 1384 aa17.38■□□□□ 0.37
LIG1-208ENST00000595758 TCRBV5S4A2TA0A5A2 114 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 WDHD1O75717 1129 aaPredicted RBP17.37■□□□□ 0.37
LIG1-208ENST00000595758 ADD2P35612 726 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 RGS3P49796 1198 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 TCP10Q12799 353 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 NBPF12Q5TAG4 269 aaPredicted RBP17.37■□□□□ 0.37
LIG1-208ENST00000595758 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 TEX11Q8IYF3 940 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 SH3RF3Q8TEJ3 882 aaPredicted RBP17.37■□□□□ 0.37
LIG1-208ENST00000595758 FAM151AQ8WW52 585 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 TEPSINQ96N21 525 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 OSBPL3Q9H4L5 887 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 FAM198AQ9UFP1 575 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 MAST2Q6P0Q8 1798 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 TRPM7Q96QT4 1865 aa17.37■□□□□ 0.37
LIG1-208ENST00000595758 DOCK2Q92608 1830 aa17.36■□□□□ 0.37
LIG1-208ENST00000595758 ENTPD3O75355 529 aa17.36■□□□□ 0.37
LIG1-208ENST00000595758 PDE4AP27815 886 aa17.36■□□□□ 0.37
LIG1-208ENST00000595758 DYNLL1P63167 89 aaKnown RBP17.36■□□□□ 0.37
LIG1-208ENST00000595758 UBE3CQ15386 1083 aa17.36■□□□□ 0.37
LIG1-208ENST00000595758 CERS3Q8IU89 383 aa17.36■□□□□ 0.37
LIG1-208ENST00000595758 MAGEB6P1A0A0J9YX57 407 aa17.35■□□□□ 0.37
LIG1-208ENST00000595758 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
LIG1-208ENST00000595758 FKBP1BP68106 108 aa17.35■□□□□ 0.37
LIG1-208ENST00000595758 PICALMQ13492 652 aa17.35■□□□□ 0.37
LIG1-208ENST00000595758 TTLL12Q14166 644 aaPredicted RBP17.35■□□□□ 0.37
LIG1-208ENST00000595758 LRRFIP1Q32MZ4 808 aaKnown RBP17.35■□□□□ 0.37
LIG1-208ENST00000595758 CDAN1Q8IWY9 1227 aa17.35■□□□□ 0.37
LIG1-208ENST00000595758 ZFPM1Q8IX07 1006 aa17.35■□□□□ 0.37
LIG1-208ENST00000595758 DDX4Q9NQI0 724 aaKnown RBP17.35■□□□□ 0.37
LIG1-208ENST00000595758 TLL2Q9Y6L7 1015 aa17.35■□□□□ 0.37
LIG1-208ENST00000595758 RNF113AO15541 343 aaKnown RBP17.34■□□□□ 0.37
LIG1-208ENST00000595758 PPP1R12BO60237 982 aaPredicted RBP17.34■□□□□ 0.37
LIG1-208ENST00000595758 PRKG1Q13976 671 aa17.34■□□□□ 0.37
LIG1-208ENST00000595758 RFX7Q2KHR2 1363 aa17.34■□□□□ 0.37
LIG1-208ENST00000595758 SLFNL1Q499Z3 407 aa17.34■□□□□ 0.37
LIG1-208ENST00000595758 SAPCD2Q86UD0 394 aa17.34■□□□□ 0.37
LIG1-208ENST00000595758 EVI5LQ96CN4 794 aa17.34■□□□□ 0.37
LIG1-208ENST00000595758 FSD1Q9BTV5 496 aa17.34■□□□□ 0.37
LIG1-208ENST00000595758 CHGBP05060 677 aa17.33■□□□□ 0.36
LIG1-208ENST00000595758 ZFYP08048 801 aaPredicted RBP17.33■□□□□ 0.36
LIG1-208ENST00000595758 HUNKP57058 714 aa17.33■□□□□ 0.36
LIG1-208ENST00000595758 MOB2Q70IA6 237 aa17.33■□□□□ 0.36
LIG1-208ENST00000595758 ARMC9Q7Z3E5 817 aa17.33■□□□□ 0.36
LIG1-208ENST00000595758 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.36
LIG1-208ENST00000595758 TGFBRAP1Q8WUH2 860 aa17.33■□□□□ 0.36
LIG1-208ENST00000595758 HOOK2Q96ED9 719 aa17.33■□□□□ 0.36
LIG1-208ENST00000595758 RIOK1Q9BRS2 568 aaKnown RBP17.33■□□□□ 0.36
LIG1-208ENST00000595758 PPP4R2Q9NY27 417 aa17.33■□□□□ 0.36
LIG1-208ENST00000595758 RPAP1Q9BWH6 1393 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms