RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 TTC14Q96N46 770 aa15.71■□□□□ 0.1
VRK3-205ENST00000593919 PSMD1Q99460 953 aa15.71■□□□□ 0.1
VRK3-205ENST00000593919 AATFQ9NY61 560 aaKnown RBP eCLIP15.71■□□□□ 0.1
VRK3-205ENST00000593919 ZMYM6O95789 1325 aa15.7■□□□□ 0.1
VRK3-205ENST00000593919 ECE2O60344 883 aa15.7■□□□□ 0.1
VRK3-205ENST00000593919 DALRD3Q5D0E6 543 aaKnown RBP15.7■□□□□ 0.1
VRK3-205ENST00000593919 RUFY3Q7L099 469 aa15.7■□□□□ 0.1
VRK3-205ENST00000593919 IFNL3Q8IZI9 196 aa15.7■□□□□ 0.1
VRK3-205ENST00000593919 CYP46A1Q9Y6A2 500 aa15.7■□□□□ 0.1
VRK3-205ENST00000593919 PPIP5K2O43314 1243 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 RAB3GAP1Q15042 981 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 ALX1Q15699 326 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 SOGA3Q5TF21 947 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 IL27Q8NEV9 243 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 SDR42E1Q8WUS8 393 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 TNPO1Q92973 898 aaKnown RBP15.69■□□□□ 0.1
VRK3-205ENST00000593919 KCNQ5Q9NR82 932 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 ARFGEF1Q9Y6D6 1849 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 E7EWF7 191 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 GSTO1P78417 241 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 BLOC1S2Q6QNY1 142 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 NOL8Q76FK4 1167 aaKnown RBP15.69■□□□□ 0.1
VRK3-205ENST00000593919 CERS5Q8N5B7 392 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 NAPBQ9H115 298 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 SPON1Q9HCB6 807 aa15.69■□□□□ 0.1
VRK3-205ENST00000593919 ZNF213O14771 459 aa15.68■□□□□ 0.1
VRK3-205ENST00000593919 MCM2P49736 904 aa15.68■□□□□ 0.1
VRK3-205ENST00000593919 NEK1Q96PY6 1258 aa15.68■□□□□ 0.1
VRK3-205ENST00000593919 MXD3Q9BW11 206 aa15.68■□□□□ 0.1
VRK3-205ENST00000593919 NACAP1Q9BZK3 213 aa15.68■□□□□ 0.1
VRK3-205ENST00000593919 MROH7-TTC4A0A0A0MT08 1334 aa15.68■□□□□ 0.1
VRK3-205ENST00000593919 ADAMTSL1Q8N6G6 1762 aa15.68■□□□□ 0.1
VRK3-205ENST00000593919 COL4A5P29400 1685 aa15.68■□□□□ 0.1
VRK3-205ENST00000593919 RPS6KB1P23443 525 aa15.67■□□□□ 0.1
VRK3-205ENST00000593919 TDO2P48775 406 aa15.67■□□□□ 0.1
VRK3-205ENST00000593919 AK2P54819 239 aa15.67■□□□□ 0.1
VRK3-205ENST00000593919 TCEANC2Q96MN5 208 aa15.67■□□□□ 0.1
VRK3-205ENST00000593919 NBPF3Q9H094 633 aa15.67■□□□□ 0.1
VRK3-205ENST00000593919 PDRG1Q9NUG6 133 aa15.67■□□□□ 0.1
VRK3-205ENST00000593919 LAMB1P07942 1786 aa15.67■□□□□ 0.1
VRK3-205ENST00000593919 TIAM2Q8IVF5 1701 aa15.67■□□□□ 0.1
VRK3-205ENST00000593919 NLGN2Q8NFZ4 835 aa15.67■□□□□ 0.1
VRK3-205ENST00000593919 ZNF277Q9NRM2 450 aaPredicted RBP15.67■□□□□ 0.1
VRK3-205ENST00000593919 SUGT1Q9Y2Z0 365 aa15.67■□□□□ 0.1
VRK3-205ENST00000593919 NAV1Q8NEY1 1877 aa15.66■□□□□ 0.1
VRK3-205ENST00000593919 DDX11L8A8MPP1 907 aa15.66■□□□□ 0.1
VRK3-205ENST00000593919 LDHCP07864 332 aa15.66■□□□□ 0.1
VRK3-205ENST00000593919 STRIP1Q5VSL9 837 aa15.66■□□□□ 0.1
VRK3-205ENST00000593919 FOCADQ5VW36 1801 aa15.66■□□□□ 0.1
VRK3-205ENST00000593919 YDJCA8MPS7 323 aa15.66■□□□□ 0.1
VRK3-205ENST00000593919 F8W031 263 aaPredicted RBP15.66■□□□□ 0.1
VRK3-205ENST00000593919 TBC1D10CQ8IV04 446 aa15.66■□□□□ 0.1
VRK3-205ENST00000593919 TMX3Q96JJ7 454 aa15.66■□□□□ 0.1
VRK3-205ENST00000593919 GBP4Q96PP9 640 aa15.66■□□□□ 0.1
VRK3-205ENST00000593919 CRNKL1Q9BZJ0 848 aaKnown RBP15.66■□□□□ 0.1
VRK3-205ENST00000593919 BCS1LQ9Y276 419 aa15.66■□□□□ 0.1
VRK3-205ENST00000593919 USP17L3A6NCW0 530 aa15.65■□□□□ 0.1
VRK3-205ENST00000593919 USP17L4A6NCW7 530 aa15.65■□□□□ 0.1
VRK3-205ENST00000593919 BAG3O95817 575 aa15.65■□□□□ 0.1
VRK3-205ENST00000593919 DACT2Q5SW24 774 aa15.65■□□□□ 0.1
VRK3-205ENST00000593919 USP17L1Q7RTZ2 530 aa15.65■□□□□ 0.1
VRK3-205ENST00000593919 SLF2Q8IX21 1173 aa15.65■□□□□ 0.1
VRK3-205ENST00000593919 LARGE2Q8N3Y3 721 aa15.65■□□□□ 0.1
VRK3-205ENST00000593919 FAM163AQ96GL9 167 aaPredicted RBP15.65■□□□□ 0.1
VRK3-205ENST00000593919 LARP6Q9BRS8 491 aaKnown RBP15.65■□□□□ 0.1
VRK3-205ENST00000593919 TTF2Q9UNY4 1162 aaKnown RBP15.65■□□□□ 0.1
VRK3-205ENST00000593919 GAKO14976 1311 aa15.65■□□□□ 0.1
VRK3-205ENST00000593919 TRAK2O60296 914 aa15.64■□□□□ 0.09
VRK3-205ENST00000593919 HMGB1P09429 215 aaKnown RBP15.64■□□□□ 0.09
VRK3-205ENST00000593919 BTDP43251 543 aa15.64■□□□□ 0.09
VRK3-205ENST00000593919 PPP4CP60510 307 aa15.64■□□□□ 0.09
VRK3-205ENST00000593919 SH3RF3Q8TEJ3 882 aaPredicted RBP15.64■□□□□ 0.09
VRK3-205ENST00000593919 NOL10Q9BSC4 688 aaKnown RBP15.64■□□□□ 0.09
VRK3-205ENST00000593919 ECM29Q5VYK3 1845 aa15.64■□□□□ 0.09
VRK3-205ENST00000593919 GPR75-ASB3A0A0A6YYF3 556 aa15.64■□□□□ 0.09
VRK3-205ENST00000593919 FKBP1AP62942 108 aaKnown RBP15.64■□□□□ 0.09
VRK3-205ENST00000593919 GIMAP6Q6P9H5 292 aa15.64■□□□□ 0.09
VRK3-205ENST00000593919 DHX32Q7L7V1 743 aaKnown RBP15.64■□□□□ 0.09
VRK3-205ENST00000593919 GZF1Q9H116 711 aaPredicted RBP15.64■□□□□ 0.09
VRK3-205ENST00000593919 VPS33BQ9H267 617 aa15.64■□□□□ 0.09
VRK3-205ENST00000593919 TAOK3Q9H2K8 898 aa15.64■□□□□ 0.09
VRK3-205ENST00000593919 DCP1AQ9NPI6 582 aaPredicted RBP15.64■□□□□ 0.09
VRK3-205ENST00000593919 DAGLAQ9Y4D2 1042 aa15.64■□□□□ 0.09
VRK3-205ENST00000593919 MYH1P12882 1939 aa15.63■□□□□ 0.09
VRK3-205ENST00000593919 CTDSPL2Q05D32 466 aa15.63■□□□□ 0.09
VRK3-205ENST00000593919 TOB2Q14106 344 aaPredicted RBP15.63■□□□□ 0.09
VRK3-205ENST00000593919 ATP8A2Q9NTI2 1148 aa15.63■□□□□ 0.09
VRK3-205ENST00000593919 LIMCH1Q9UPQ0 1083 aa15.63■□□□□ 0.09
VRK3-205ENST00000593919 NFKBIEO00221 500 aa15.62■□□□□ 0.09
VRK3-205ENST00000593919 IARSP41252 1262 aaKnown RBP15.62■□□□□ 0.09
VRK3-205ENST00000593919 SCNN1DP51172 638 aa15.62■□□□□ 0.09
VRK3-205ENST00000593919 PPARAQ07869 468 aa15.62■□□□□ 0.09
VRK3-205ENST00000593919 CERS3Q8IU89 383 aa15.62■□□□□ 0.09
VRK3-205ENST00000593919 KIAA0825Q8IV33 1275 aa15.62■□□□□ 0.09
VRK3-205ENST00000593919 NCOA7Q8NI08 942 aa15.62■□□□□ 0.09
VRK3-205ENST00000593919 LRRC2Q9BYS8 371 aa15.62■□□□□ 0.09
VRK3-205ENST00000593919 ALDH8A1Q9H2A2 487 aaPredicted RBP15.62■□□□□ 0.09
VRK3-205ENST00000593919 DDX60LQ5H9U9 1706 aaKnown RBP15.62■□□□□ 0.09
VRK3-205ENST00000593919 NEDD4P46934 1319 aa15.62■□□□□ 0.09
VRK3-205ENST00000593919 MINDY4BA8MYZ0 360 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms