RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 NKX2-3Q8TAU0 364 aa18.37■□□□□ 0.53
CNN1-210ENST00000592923 TFIP11Q9UBB9 837 aaKnown RBP18.37■□□□□ 0.53
CNN1-210ENST00000592923 MAGEB6P1A0A0J9YX57 407 aa18.36■□□□□ 0.53
CNN1-210ENST00000592923 WTIPA6NIX2 430 aaPredicted RBP18.36■□□□□ 0.53
CNN1-210ENST00000592923 CDKL5O76039 1030 aa18.36■□□□□ 0.53
CNN1-210ENST00000592923 ADD1P35611 737 aaKnown RBP18.36■□□□□ 0.53
CNN1-210ENST00000592923 LIFRP42702 1097 aa18.36■□□□□ 0.53
CNN1-210ENST00000592923 METAP2P50579 478 aaKnown RBP eCLIP18.36■□□□□ 0.53
CNN1-210ENST00000592923 ADGRA1Q86SQ6 560 aa18.36■□□□□ 0.53
CNN1-210ENST00000592923 IGDCC4Q8TDY8 1250 aa18.36■□□□□ 0.53
CNN1-210ENST00000592923 TRIM44Q96DX7 344 aaPredicted RBP18.36■□□□□ 0.53
CNN1-210ENST00000592923 PDLIM2Q96JY6 352 aa18.36■□□□□ 0.53
CNN1-210ENST00000592923 MTA3Q9BTC8 594 aa18.36■□□□□ 0.53
CNN1-210ENST00000592923 LY9Q9HBG7 655 aa18.36■□□□□ 0.53
CNN1-210ENST00000592923 LRRC4BQ9NT99 713 aa18.36■□□□□ 0.53
CNN1-210ENST00000592923 GOLGA6L4A6NEF3 574 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 FOSBP53539 338 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 CTDSPL2Q05D32 466 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 NFIXQ14938 502 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 TMED8Q6PL24 325 aaPredicted RBP18.35■□□□□ 0.53
CNN1-210ENST00000592923 CNBD1Q8NA66 436 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 ZNF396Q96N95 335 aaPredicted RBP18.35■□□□□ 0.53
CNN1-210ENST00000592923 RIOK1Q9BRS2 568 aaKnown RBP18.35■□□□□ 0.53
CNN1-210ENST00000592923 RNF41Q9H4P4 317 aaPredicted RBP18.35■□□□□ 0.53
CNN1-210ENST00000592923 ORC3Q9UBD5 711 aaPredicted RBP18.35■□□□□ 0.53
CNN1-210ENST00000592923 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 IRS2Q9Y4H2 1338 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 NPHP1O15259 732 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 KLRK1P26718 216 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 TPRNQ4KMQ1 711 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 TMEM67Q5HYA8 995 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 SLC27A3Q5K4L6 730 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 C8orf76Q96K31 380 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 FUCA2Q9BTY2 467 aa18.35■□□□□ 0.53
CNN1-210ENST00000592923 DDX19AQ9NUU7 478 aaKnown RBP18.35■□□□□ 0.53
CNN1-210ENST00000592923 LAMB1P07942 1786 aa18.34■□□□□ 0.53
CNN1-210ENST00000592923 DUOX1Q9NRD9 1551 aa18.34■□□□□ 0.53
CNN1-210ENST00000592923 LIG1P18858 919 aa18.34■□□□□ 0.53
CNN1-210ENST00000592923 HIBADHP31937 336 aaKnown RBP18.34■□□□□ 0.53
CNN1-210ENST00000592923 GRAPQ13588 217 aa18.34■□□□□ 0.53
CNN1-210ENST00000592923 GRAPLQ8TC17 118 aaPredicted RBP18.34■□□□□ 0.53
CNN1-210ENST00000592923 ANAPC4Q9UJX5 808 aa18.34■□□□□ 0.53
CNN1-210ENST00000592923 TACC3Q9Y6A5 838 aa18.34■□□□□ 0.53
CNN1-210ENST00000592923 CCDC88AQ3V6T2 1871 aa18.33■□□□□ 0.53
CNN1-210ENST00000592923 ZBTB43O43298 467 aa18.33■□□□□ 0.53
CNN1-210ENST00000592923 KDM4AO75164 1064 aa18.33■□□□□ 0.53
CNN1-210ENST00000592923 CPLX2Q6PUV4 134 aaKnown RBP18.33■□□□□ 0.53
CNN1-210ENST00000592923 ILDR1Q86SU0 546 aaPredicted RBP18.33■□□□□ 0.53
CNN1-210ENST00000592923 CCDC24Q8N4L8 307 aa18.33■□□□□ 0.53
CNN1-210ENST00000592923 RNF214Q8ND24 703 aa18.33■□□□□ 0.53
CNN1-210ENST00000592923 FBXO18Q8NFZ0 1043 aa18.33■□□□□ 0.53
CNN1-210ENST00000592923 PGBD1Q96JS3 809 aa18.33■□□□□ 0.53
CNN1-210ENST00000592923 NUP62CLQ9H1M0 184 aa18.33■□□□□ 0.53
CNN1-210ENST00000592923 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.33■□□□□ 0.52
CNN1-210ENST00000592923 PPARAQ07869 468 aa18.33■□□□□ 0.52
CNN1-210ENST00000592923 UVSSAQ2YD98 709 aa18.33■□□□□ 0.52
CNN1-210ENST00000592923 RAB11FIP4Q86YS3 637 aa18.33■□□□□ 0.52
CNN1-210ENST00000592923 BRIP1Q9BX63 1249 aa18.33■□□□□ 0.52
CNN1-210ENST00000592923 ZSWIM5Q9P217 1185 aa18.33■□□□□ 0.52
CNN1-210ENST00000592923 RCOR1Q9UKL0 485 aa18.33■□□□□ 0.52
CNN1-210ENST00000592923 IFIT3O14879 490 aaKnown RBP18.32■□□□□ 0.52
CNN1-210ENST00000592923 PPFIA3O75145 1194 aa18.32■□□□□ 0.52
CNN1-210ENST00000592923 GUCY1B3Q02153 619 aa18.32■□□□□ 0.52
CNN1-210ENST00000592923 SART3Q15020 963 aaKnown RBP18.32■□□□□ 0.52
CNN1-210ENST00000592923 GIMAP6Q6P9H5 292 aa18.32■□□□□ 0.52
CNN1-210ENST00000592923 NFXL1Q6ZNB6 911 aa18.32■□□□□ 0.52
CNN1-210ENST00000592923 BRAPQ7Z569 592 aa18.32■□□□□ 0.52
CNN1-210ENST00000592923 MICU3Q86XE3 530 aa18.32■□□□□ 0.52
CNN1-210ENST00000592923 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
CNN1-210ENST00000592923 ZNF384Q8TF68 577 aa18.32■□□□□ 0.52
CNN1-210ENST00000592923 STK36Q9NRP7 1315 aa18.31■□□□□ 0.52
CNN1-210ENST00000592923 GOLGA8AA7E2F4 631 aa18.31■□□□□ 0.52
CNN1-210ENST00000592923 IGSF3O75054 1194 aa18.31■□□□□ 0.52
CNN1-210ENST00000592923 RCAN1P53805 252 aa18.31■□□□□ 0.52
CNN1-210ENST00000592923 MAP3K11Q16584 847 aa18.31■□□□□ 0.52
CNN1-210ENST00000592923 NSUN4Q96CB9 384 aaKnown RBP18.31■□□□□ 0.52
CNN1-210ENST00000592923 USP28Q96RU2 1077 aa18.31■□□□□ 0.52
CNN1-210ENST00000592923 CLSTN2Q9H4D0 955 aa18.31■□□□□ 0.52
CNN1-210ENST00000592923 QTRT2Q9H974 415 aaKnown RBP18.31■□□□□ 0.52
CNN1-210ENST00000592923 SENP2Q9HC62 589 aa18.31■□□□□ 0.52
CNN1-210ENST00000592923 RRAGDQ9NQL2 400 aaPredicted RBP18.31■□□□□ 0.52
CNN1-210ENST00000592923 HS1BP3Q53T59 392 aa18.3■□□□□ 0.52
CNN1-210ENST00000592923 PRR5LQ6MZQ0 368 aa18.3■□□□□ 0.52
CNN1-210ENST00000592923 SDR42E1Q8WUS8 393 aa18.3■□□□□ 0.52
CNN1-210ENST00000592923 INCENPQ9NQS7 918 aa18.3■□□□□ 0.52
CNN1-210ENST00000592923 DACT1Q9NYF0 836 aa18.3■□□□□ 0.52
CNN1-210ENST00000592923 SLC12A7Q9Y666 1083 aa18.3■□□□□ 0.52
CNN1-210ENST00000592923 CCDC69A6NI79 296 aa18.3■□□□□ 0.52
CNN1-210ENST00000592923 RBM43Q6ZSC3 357 aaKnown RBP18.3■□□□□ 0.52
CNN1-210ENST00000592923 TFCP2L1Q9NZI6 479 aa18.3■□□□□ 0.52
CNN1-210ENST00000592923 LEMD3Q9Y2U8 911 aa18.3■□□□□ 0.52
CNN1-210ENST00000592923 BAZ2AQ9UIF9 1905 aaKnown RBP18.3■□□□□ 0.52
CNN1-210ENST00000592923 DLEC1Q9Y238 1755 aa18.29■□□□□ 0.52
CNN1-210ENST00000592923 CCDC192P0DO97 292 aa18.29■□□□□ 0.52
CNN1-210ENST00000592923 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
CNN1-210ENST00000592923 GYS1P13807 737 aa18.29■□□□□ 0.52
CNN1-210ENST00000592923 CDC27P30260 824 aa18.29■□□□□ 0.52
CNN1-210ENST00000592923 MECOMQ03112 1051 aa18.29■□□□□ 0.52
CNN1-210ENST00000592923 NTRK3Q16288 839 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms