RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 NPDC1Q9NQX5 325 aaPredicted RBP6.89□□□□□ -1.31
ERCC1-216ENST00000592444 ZNF652Q9Y2D9 606 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 MYPNQ86TC9 1320 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 DNAH12Q6ZR08 3092 aa6.88□□□□□ -1.31
ERCC1-216ENST00000592444 PI4K2BG5E9Z4 385 aa6.88□□□□□ -1.31
ERCC1-216ENST00000592444 TLR2O60603 784 aa6.88□□□□□ -1.31
ERCC1-216ENST00000592444 FMNL1O95466 1100 aaPredicted RBP6.88□□□□□ -1.31
ERCC1-216ENST00000592444 VIL1P09327 827 aaKnown RBP6.88□□□□□ -1.31
ERCC1-216ENST00000592444 HOXD10P28358 340 aa6.88□□□□□ -1.31
ERCC1-216ENST00000592444 NBPF9Q3BBW0 867 aa6.88□□□□□ -1.31
ERCC1-216ENST00000592444 AMOTQ4VCS5 1084 aa6.88□□□□□ -1.31
ERCC1-216ENST00000592444 C9orf50Q5SZB4 431 aa6.88□□□□□ -1.31
ERCC1-216ENST00000592444 AKNAD1Q5T1N1 836 aa6.88□□□□□ -1.31
ERCC1-216ENST00000592444 ANKLE1Q8NAG6 615 aa6.88□□□□□ -1.31
ERCC1-216ENST00000592444 ZBTB38Q8NAP3 1195 aaPredicted RBP6.88□□□□□ -1.31
ERCC1-216ENST00000592444 LGR6Q9HBX8 967 aa6.88□□□□□ -1.31
ERCC1-216ENST00000592444 PAK6Q9NQU5 681 aaPredicted RBP6.88□□□□□ -1.31
ERCC1-216ENST00000592444 ZFHX2Q9C0A1 2572 aaPredicted RBP6.87□□□□□ -1.31
ERCC1-216ENST00000592444 ECE2O60344 883 aa6.87□□□□□ -1.31
ERCC1-216ENST00000592444 INHAP05111 366 aa6.87□□□□□ -1.31
ERCC1-216ENST00000592444 PADI6Q6TGC4 694 aa6.87□□□□□ -1.31
ERCC1-216ENST00000592444 PODNQ7Z5L7 613 aa6.87□□□□□ -1.31
ERCC1-216ENST00000592444 SP8Q8IXZ3 490 aa6.87□□□□□ -1.31
ERCC1-216ENST00000592444 FAM43AQ8N2R8 423 aa6.87□□□□□ -1.31
ERCC1-216ENST00000592444 BRI3BPQ8WY22 251 aa6.87□□□□□ -1.31
ERCC1-216ENST00000592444 CNTNAP3BQ96NU0 1288 aa6.87□□□□□ -1.31
ERCC1-216ENST00000592444 GAS2L1Q99501 681 aaPredicted RBP6.87□□□□□ -1.31
ERCC1-216ENST00000592444 CNTNAP3Q9BZ76 1288 aa6.87□□□□□ -1.31
ERCC1-216ENST00000592444 CXXC1Q9P0U4 656 aaPredicted RBP6.87□□□□□ -1.31
ERCC1-216ENST00000592444 CCL15-CCL14A0A0B4J2E2 113 aa6.86□□□□□ -1.31
ERCC1-216ENST00000592444 PIP4K2AP48426 406 aaPredicted RBP6.86□□□□□ -1.31
ERCC1-216ENST00000592444 PRKCZQ05513 592 aa6.86□□□□□ -1.31
ERCC1-216ENST00000592444 ACAP1Q15027 740 aa6.86□□□□□ -1.31
ERCC1-216ENST00000592444 CCL15Q16663 113 aa6.86□□□□□ -1.31
ERCC1-216ENST00000592444 WASHC4Q2M389 1173 aa6.86□□□□□ -1.31
ERCC1-216ENST00000592444 ZNF516Q92618 1163 aa6.86□□□□□ -1.31
ERCC1-216ENST00000592444 DACH1Q9UI36 760 aa6.86□□□□□ -1.31
ERCC1-216ENST00000592444 LAMB2P55268 1798 aa6.86□□□□□ -1.31
ERCC1-216ENST00000592444 ABCC4O15439 1325 aa6.85□□□□□ -1.31
ERCC1-216ENST00000592444 ADGRA2Q96PE1 1338 aa6.85□□□□□ -1.31
ERCC1-216ENST00000592444 ADCY3O60266 1144 aa6.85□□□□□ -1.31
ERCC1-216ENST00000592444 WDHD1O75717 1129 aaPredicted RBP6.85□□□□□ -1.31
ERCC1-216ENST00000592444 ELNP15502 786 aa6.85□□□□□ -1.31
ERCC1-216ENST00000592444 CSPP1Q1MSJ5 1256 aa6.85□□□□□ -1.31
ERCC1-216ENST00000592444 SWT1Q5T5J6 900 aaKnown RBP6.85□□□□□ -1.31
ERCC1-216ENST00000592444 SLF2Q8IX21 1173 aa6.85□□□□□ -1.31
ERCC1-216ENST00000592444 ZNF775Q96BV0 537 aaPredicted RBP6.85□□□□□ -1.31
ERCC1-216ENST00000592444 TEX13AQ9BXU3 409 aaPredicted RBP6.85□□□□□ -1.31
ERCC1-216ENST00000592444 NYXQ9GZU5 481 aa6.85□□□□□ -1.31
ERCC1-216ENST00000592444 ZNF576Q9H609 170 aa6.85□□□□□ -1.31
ERCC1-216ENST00000592444 RALYQ9UKM9 306 aaKnown RBP6.85□□□□□ -1.31
ERCC1-216ENST00000592444 GABRQQ9UN88 632 aa6.85□□□□□ -1.31
ERCC1-216ENST00000592444 PFASO15067 1338 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 USP17L8P0C7I0 530 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 ID4P47928 161 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 EIF4A2Q14240 407 aaKnown RBP6.84□□□□□ -1.31
ERCC1-216ENST00000592444 HLFQ16534 295 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 LRRC26Q2I0M4 334 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 AAK1Q2M2I8 961 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 AGBL3Q8NEM8 1001 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 HELBQ8NG08 1087 aaPredicted RBP6.84□□□□□ -1.31
ERCC1-216ENST00000592444 ANKS1AQ92625 1134 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 OPTNQ96CV9 577 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 TSHZ2Q9NRE2 1034 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 CPA4Q9UI42 421 aa6.84□□□□□ -1.31
ERCC1-216ENST00000592444 COL3A1P02461 1466 aaPredicted RBP6.84□□□□□ -1.31
ERCC1-216ENST00000592444 DDX60LQ5H9U9 1706 aaKnown RBP6.84□□□□□ -1.31
ERCC1-216ENST00000592444 MYO15AQ9UKN7 3530 aa6.84□□□□□ -1.32
ERCC1-216ENST00000592444 DUOX1Q9NRD9 1551 aa6.83□□□□□ -1.32
ERCC1-216ENST00000592444 MED19A0JLT2 244 aaPredicted RBP6.83□□□□□ -1.32
ERCC1-216ENST00000592444 UNCXA6NJT0 531 aa6.83□□□□□ -1.32
ERCC1-216ENST00000592444 PPP1R12BO60237 982 aaPredicted RBP6.83□□□□□ -1.32
ERCC1-216ENST00000592444 BBOX1O75936 387 aa6.83□□□□□ -1.32
ERCC1-216ENST00000592444 IGFBP4P22692 258 aa6.83□□□□□ -1.32
ERCC1-216ENST00000592444 MLLT3P42568 568 aaPredicted RBP6.83□□□□□ -1.32
ERCC1-216ENST00000592444 ADGRE1Q14246 886 aa6.83□□□□□ -1.32
ERCC1-216ENST00000592444 RSBN1LQ6PCB5 846 aaPredicted RBP6.83□□□□□ -1.32
ERCC1-216ENST00000592444 C17orf99Q6UX52 265 aa6.83□□□□□ -1.32
ERCC1-216ENST00000592444 TTC5Q8N0Z6 440 aa6.83□□□□□ -1.32
ERCC1-216ENST00000592444 TMUB1Q9BVT8 246 aa6.83□□□□□ -1.32
ERCC1-216ENST00000592444 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.83□□□□□ -1.32
ERCC1-216ENST00000592444 PRDM12Q9H4Q4 367 aa6.83□□□□□ -1.32
ERCC1-216ENST00000592444 ELP3Q9H9T3 547 aa6.83□□□□□ -1.32
ERCC1-216ENST00000592444 PTPRZ1P23471 2315 aaPredicted RBP6.83□□□□□ -1.32
ERCC1-216ENST00000592444 HEG1Q9ULI3 1381 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 SCN9AQ15858 1988 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 TPRP12270 2363 aaKnown RBP6.82□□□□□ -1.32
ERCC1-216ENST00000592444 WNT10BO00744 389 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 RNMTO43148 476 aaKnown RBP6.82□□□□□ -1.32
ERCC1-216ENST00000592444 DNAJB2P25686 324 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 PKDCCQ504Y2 493 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 GMLQ99445 158 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 PCGF6Q9BYE7 350 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 CD320Q9NPF0 282 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 DMDP11532 3685 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 FASNP49327 2511 aaKnown RBP6.82□□□□□ -1.32
ERCC1-216ENST00000592444 UBR2Q8IWV8 1755 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 CHD9Q3L8U1 2897 aa6.82□□□□□ -1.32
ERCC1-216ENST00000592444 DNAH14Q0VDD8 3507 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms