RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 GGA1Q9UJY5 639 aa11.77□□□□□ -0.53
PTPN2-210ENST00000591115 COL1A1P02452 1464 aaPredicted RBP11.77□□□□□ -0.53
PTPN2-210ENST00000591115 SBF1O95248 1867 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 C6orf229H3BNL8 230 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 ZNF213O14771 459 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 GNAT2P19087 354 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 GYG1P46976 350 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 COL9A3Q14050 684 aaPredicted RBP11.76□□□□□ -0.53
PTPN2-210ENST00000591115 FBXO33Q7Z6M2 555 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 GTF3C6Q969F1 213 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 AIDAQ96BJ3 306 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 STRBPQ96SI9 672 aaKnown RBP11.76□□□□□ -0.53
PTPN2-210ENST00000591115 LLPHQ9BRT6 129 aaKnown RBP11.76□□□□□ -0.53
PTPN2-210ENST00000591115 DENND2AQ9ULE3 1009 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 TIAM2Q8IVF5 1701 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 PSME4Q14997 1843 aa11.76□□□□□ -0.53
PTPN2-210ENST00000591115 ATP2B4P23634 1241 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 EVCP57679 992 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 FGD1P98174 961 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 TTLL5Q6EMB2 1281 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 MAGEB6Q8N7X4 407 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 NECAB1Q8N987 351 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 ZNF274Q96GC6 653 aaPredicted RBP11.75□□□□□ -0.53
PTPN2-210ENST00000591115 TCEANC2Q96MN5 208 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 LEMD3Q9Y2U8 911 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 PATL2C9JE40 543 aaKnown RBP11.75□□□□□ -0.53
PTPN2-210ENST00000591115 PFKFB2O60825 505 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 YBX3P16989 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTPN2-210ENST00000591115 MCM5P33992 734 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 NCOA7Q8NI08 942 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 BRF1Q92994 677 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 FAM84BQ96KN1 310 aaPredicted RBP11.75□□□□□ -0.53
PTPN2-210ENST00000591115 LRP2BPQ9P2M1 347 aa11.75□□□□□ -0.53
PTPN2-210ENST00000591115 DDX49Q9Y6V7 483 aaKnown RBP11.75□□□□□ -0.53
PTPN2-210ENST00000591115 DICER1Q9UPY3 1922 aaKnown RBP11.74□□□□□ -0.53
PTPN2-210ENST00000591115 LAMA4Q16363 1823 aa11.74□□□□□ -0.53
PTPN2-210ENST00000591115 NFKBIEO00221 500 aa11.74□□□□□ -0.53
PTPN2-210ENST00000591115 RIMBP2O15034 1052 aa11.74□□□□□ -0.53
PTPN2-210ENST00000591115 F13A1P00488 732 aa11.74□□□□□ -0.53
PTPN2-210ENST00000591115 RASSF7Q02833 373 aa11.74□□□□□ -0.53
PTPN2-210ENST00000591115 CC2D2BQ6DHV5 1058 aa11.74□□□□□ -0.53
PTPN2-210ENST00000591115 RALYLQ86SE5 291 aaKnown RBP11.74□□□□□ -0.53
PTPN2-210ENST00000591115 VPS37DQ86XT2 251 aa11.74□□□□□ -0.53
PTPN2-210ENST00000591115 MB21D2Q8IYB1 491 aaPredicted RBP11.74□□□□□ -0.53
PTPN2-210ENST00000591115 TMEM87AQ8NBN3 555 aa11.74□□□□□ -0.53
PTPN2-210ENST00000591115 IQSEC3Q9UPP2 1182 aaPredicted RBP11.74□□□□□ -0.53
PTPN2-210ENST00000591115 MTMR6Q9Y217 621 aa11.74□□□□□ -0.53
PTPN2-210ENST00000591115 MAST2Q6P0Q8 1798 aa11.73□□□□□ -0.53
PTPN2-210ENST00000591115 MBD4O95243 580 aa11.73□□□□□ -0.53
PTPN2-210ENST00000591115 MBD3O95983 291 aa11.73□□□□□ -0.53
PTPN2-210ENST00000591115 TRDNQ13061 729 aa11.73□□□□□ -0.53
PTPN2-210ENST00000591115 AOC3Q16853 763 aa11.73□□□□□ -0.53
PTPN2-210ENST00000591115 L1TD1Q5T7N2 865 aaKnown RBP11.73□□□□□ -0.53
PTPN2-210ENST00000591115 SOGA3Q5TF21 947 aa11.73□□□□□ -0.53
PTPN2-210ENST00000591115 LARP1BQ659C4 914 aaKnown RBP11.73□□□□□ -0.53
PTPN2-210ENST00000591115 RTKN2Q8IZC4 609 aa11.73□□□□□ -0.53
PTPN2-210ENST00000591115 RTFDC1Q9BY42 306 aaPredicted RBP11.73□□□□□ -0.53
PTPN2-210ENST00000591115 NACAP1Q9BZK3 213 aa11.73□□□□□ -0.53
PTPN2-210ENST00000591115 TAOK3Q9H2K8 898 aa11.73□□□□□ -0.53
PTPN2-210ENST00000591115 ZNF277Q9NRM2 450 aaPredicted RBP11.73□□□□□ -0.53
PTPN2-210ENST00000591115 KIF3AQ9Y496 699 aa11.73□□□□□ -0.53
PTPN2-210ENST00000591115 FSD2A1L4K1 749 aa11.72□□□□□ -0.53
PTPN2-210ENST00000591115 PRPF40AO75400 957 aaKnown RBP11.72□□□□□ -0.53
PTPN2-210ENST00000591115 HIBADHP31937 336 aaKnown RBP11.72□□□□□ -0.53
PTPN2-210ENST00000591115 HMGN5P82970 282 aaKnown RBP11.72□□□□□ -0.53
PTPN2-210ENST00000591115 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
PTPN2-210ENST00000591115 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
PTPN2-210ENST00000591115 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
PTPN2-210ENST00000591115 PSMD1Q99460 953 aa11.72□□□□□ -0.53
PTPN2-210ENST00000591115 APPP05067 770 aa11.71□□□□□ -0.53
PTPN2-210ENST00000591115 HAND2P61296 217 aa11.71□□□□□ -0.53
PTPN2-210ENST00000591115 DOK7Q18PE1 504 aa11.71□□□□□ -0.53
PTPN2-210ENST00000591115 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.53
PTPN2-210ENST00000591115 ZNF804AQ7Z570 1209 aa11.71□□□□□ -0.53
PTPN2-210ENST00000591115 IFNL3Q8IZI9 196 aa11.71□□□□□ -0.53
PTPN2-210ENST00000591115 FOXD4L4Q8WXT5 416 aaPredicted RBP11.71□□□□□ -0.53
PTPN2-210ENST00000591115 GZF1Q9H116 711 aaPredicted RBP11.71□□□□□ -0.53
PTPN2-210ENST00000591115 JAG2Q9Y219 1238 aa11.71□□□□□ -0.53
PTPN2-210ENST00000591115 ADAMTSL1Q8N6G6 1762 aa11.71□□□□□ -0.53
PTPN2-210ENST00000591115 GOLGA6L3A6NEY3 463 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 GSG1L2A8MUP6 293 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 PPIP5K2O43314 1243 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 PRC1O43663 620 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 CYP7A1P22680 504 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 PDIA3P30101 505 aaKnown RBP11.71□□□□□ -0.54
PTPN2-210ENST00000591115 PRELPP51888 382 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 APOBRQ0VD83 1088 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 KIAA2012Q0VF49 1180 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 SCRN1Q12765 414 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 STK3Q13188 491 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 GRIPAP1Q4V328 841 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 EYA3Q99504 573 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 LRRC2Q9BYS8 371 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 NAPBQ9H115 298 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 CNNM2Q9H8M5 875 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 DBNDD1Q9H9R9 158 aa11.71□□□□□ -0.54
PTPN2-210ENST00000591115 DHX16O60231 1041 aaKnown RBP11.7□□□□□ -0.54
PTPN2-210ENST00000591115 NCLP19338 710 aaKnown RBP11.7□□□□□ -0.54
PTPN2-210ENST00000591115 RGS22Q8NE09 1264 aa11.7□□□□□ -0.54
PTPN2-210ENST00000591115 SUPT20HQ8NEM7 779 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms