RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, human

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-231	ENST00000591097	TEPSIN	Q96N21	525 aa		28.43	■■■□□ 2.14
CIRBP-231	ENST00000591097	MKRN1	Q9UHC7	482 aa	Known RBP	28.43	■■■□□ 2.14
CIRBP-231	ENST00000591097	BTD	P43251	543 aa		28.43	■■■□□ 2.14
CIRBP-231	ENST00000591097	FAM83A	Q86UY5	434 aa		28.43	■■■□□ 2.14
CIRBP-231	ENST00000591097	CDAN1	Q8IWY9	1227 aa		28.43	■■■□□ 2.14
CIRBP-231	ENST00000591097	HAUS7	Q99871	368 aa		28.43	■■■□□ 2.14
CIRBP-231	ENST00000591097	ECHDC1	Q9NTX5	307 aa		28.43	■■■□□ 2.14
CIRBP-231	ENST00000591097	TMOD2	Q9NZR1	351 aa		28.43	■■■□□ 2.14
CIRBP-231	ENST00000591097	FKBP1B	P68106	108 aa		28.42	■■■□□ 2.14
CIRBP-231	ENST00000591097	C2orf69	Q8N8R5	385 aa		28.42	■■■□□ 2.14
CIRBP-231	ENST00000591097	OTUD7A	Q8TE49	926 aa	Predicted RBP	28.42	■■■□□ 2.14
CIRBP-231	ENST00000591097	HHIPL1	Q96JK4	782 aa		28.42	■■■□□ 2.14
CIRBP-231	ENST00000591097	TMEM39B	Q9GZU3	492 aa		28.42	■■■□□ 2.14
CIRBP-231	ENST00000591097	BOLA2	Q9H3K6	86 aa		28.42	■■■□□ 2.14
CIRBP-231	ENST00000591097	IDH1	O75874	414 aa	Known RBP	28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	LDHC	P07864	332 aa		28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	RHBDL3	P58872	404 aa		28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	NFIA	Q12857	509 aa		28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	NBPF12	Q5TAG4	269 aa	Predicted RBP	28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	ANKRD45	Q5TZF3	282 aa		28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	NAA16	Q6N069	864 aa	Predicted RBP	28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	ADGRA1	Q86SQ6	560 aa		28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	DNAJC2	Q99543	621 aa	Known RBP	28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	USP40	Q9NVE5	1235 aa		28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	SALL3	Q9BXA9	1300 aa		28.41	■■■□□ 2.14
CIRBP-231	ENST00000591097	GOLIM4	O00461	696 aa		28.4	■■■□□ 2.14
CIRBP-231	ENST00000591097	TNNI2	P48788	182 aa		28.4	■■■□□ 2.14
CIRBP-231	ENST00000591097	TTF1	Q15361	905 aa	Predicted RBP	28.4	■■■□□ 2.14
CIRBP-231	ENST00000591097	DEFB115	Q30KQ5	88 aa		28.4	■■■□□ 2.14
CIRBP-231	ENST00000591097	EDC3	Q96F86	508 aa	Known RBP	28.4	■■■□□ 2.14
CIRBP-231	ENST00000591097	NF2	P35240	595 aa		28.39	■■■□□ 2.14
CIRBP-231	ENST00000591097	HUNK	P57058	714 aa		28.39	■■■□□ 2.14
CIRBP-231	ENST00000591097	FAM198A	Q9UFP1	575 aa		28.39	■■■□□ 2.14
CIRBP-231	ENST00000591097	RPAP1	Q9BWH6	1393 aa	Predicted RBP	28.39	■■■□□ 2.14
CIRBP-231	ENST00000591097	WDHD1	O75717	1129 aa	Predicted RBP	28.38	■■■□□ 2.13
CIRBP-231	ENST00000591097	TSHZ3	Q63HK5	1081 aa		28.38	■■■□□ 2.13
CIRBP-231	ENST00000591097	IDI2	Q9BXS1	227 aa		28.38	■■■□□ 2.13
CIRBP-231	ENST00000591097	PAG1	Q9NWQ8	432 aa		28.38	■■■□□ 2.13
CIRBP-231	ENST00000591097	MAP3K12	Q12852	859 aa		28.38	■■■□□ 2.13
CIRBP-231	ENST00000591097	SUPT20HL1	Q3ZLR7	823 aa		28.38	■■■□□ 2.13
CIRBP-231	ENST00000591097	MOB2	Q70IA6	237 aa		28.38	■■■□□ 2.13
CIRBP-231	ENST00000591097	GPATCH3	Q96I76	525 aa		28.38	■■■□□ 2.13
CIRBP-231	ENST00000591097	VEGFB	P49765	207 aa		28.37	■■■□□ 2.13
CIRBP-231	ENST00000591097	TMED8	Q6PL24	325 aa	Predicted RBP	28.37	■■■□□ 2.13
CIRBP-231	ENST00000591097	TTC41P	Q6P2S7	1318 aa		28.37	■■■□□ 2.13
CIRBP-231	ENST00000591097	MAGEB6	Q8N7X4	407 aa		28.36	■■■□□ 2.13
CIRBP-231	ENST00000591097	FAM151A	Q8WW52	585 aa		28.36	■■■□□ 2.13
CIRBP-231	ENST00000591097	MAP4K4	O95819	1239 aa	Predicted RBP	28.35	■■■□□ 2.13
CIRBP-231	ENST00000591097	PPP4C	P60510	307 aa		28.35	■■■□□ 2.13
CIRBP-231	ENST00000591097	JMY	Q8N9B5	988 aa		28.35	■■■□□ 2.13
CIRBP-231	ENST00000591097	PI4K2B	Q8TCG2	481 aa		28.35	■■■□□ 2.13
CIRBP-231	ENST00000591097	FZD1	Q9UP38	647 aa		28.35	■■■□□ 2.13
CIRBP-231	ENST00000591097	MX1	P20591	662 aa		28.34	■■■□□ 2.13
CIRBP-231	ENST00000591097	CYP7A1	P22680	504 aa		28.34	■■■□□ 2.13
CIRBP-231	ENST00000591097	TCP10	Q12799	353 aa		28.34	■■■□□ 2.13
CIRBP-231	ENST00000591097	THSD7B	Q9C0I4	1608 aa		28.34	■■■□□ 2.13
CIRBP-231	ENST00000591097	RGS3	P49796	1198 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	NUCB1	Q02818	461 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	MAP3K11	Q16584	847 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	CYP4F22	Q6NT55	531 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	ZFPM1	Q8IX07	1006 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	CAPNS2	Q96L46	248 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	DDX4	Q9NQI0	724 aa	Known RBP	28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	AATF	Q9NY61	560 aa	Known RBP eCLIP	28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	UBE2Q2L	H0YL09	131 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	ENTPD3	O75355	529 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	NPM3	O75607	178 aa	Known RBP	28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	PDE6A	P16499	860 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	PRKG1	Q13976	671 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	LNPK	Q9C0E8	428 aa		28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.33	■■■□□ 2.13
CIRBP-231	ENST00000591097	TCRBV5S4A2T	A0A5A2	114 aa		28.32	■■■□□ 2.12
CIRBP-231	ENST00000591097	BAG3	O95817	575 aa		28.32	■■■□□ 2.12
CIRBP-231	ENST00000591097	TTLL12	Q14166	644 aa	Predicted RBP	28.32	■■■□□ 2.12
CIRBP-231	ENST00000591097	LDLRAD1	Q5T700	205 aa		28.32	■■■□□ 2.12
CIRBP-231	ENST00000591097	SLC9C2	Q5TAH2	1124 aa		28.32	■■■□□ 2.12
CIRBP-231	ENST00000591097	B4GALNT3	Q6L9W6	998 aa		28.32	■■■□□ 2.12
CIRBP-231	ENST00000591097	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	28.32	■■■□□ 2.12
CIRBP-231	ENST00000591097	WDR33	Q9C0J8	1336 aa	Known RBP	28.31	■■■□□ 2.12
CIRBP-231	ENST00000591097	PPP1R12B	O60237	982 aa	Predicted RBP	28.31	■■■□□ 2.12
CIRBP-231	ENST00000591097	RGMB	Q6NW40	437 aa		28.31	■■■□□ 2.12
CIRBP-231	ENST00000591097	ARMC9	Q7Z3E5	817 aa		28.31	■■■□□ 2.12
CIRBP-231	ENST00000591097	CHD1L	Q86WJ1	897 aa		28.31	■■■□□ 2.12
CIRBP-231	ENST00000591097	STAP2	Q9UGK3	403 aa		28.31	■■■□□ 2.12
CIRBP-231	ENST00000591097	ANGEL1	Q9UNK9	670 aa	Known RBP	28.31	■■■□□ 2.12
CIRBP-231	ENST00000591097	CDK5RAP2	Q96SN8	1893 aa		28.3	■■■□□ 2.12
CIRBP-231	ENST00000591097	USP2	O75604	605 aa	Predicted RBP	28.3	■■■□□ 2.12
CIRBP-231	ENST00000591097	NOL10	Q9BSC4	688 aa	Known RBP	28.3	■■■□□ 2.12
CIRBP-231	ENST00000591097	ATRNL1	Q5VV63	1379 aa		28.3	■■■□□ 2.12
CIRBP-231	ENST00000591097	FAM155A	B1AL88	458 aa	Predicted RBP	28.29	■■■□□ 2.12
CIRBP-231	ENST00000591097	ERC2	O15083	957 aa		28.29	■■■□□ 2.12
CIRBP-231	ENST00000591097	GLRX3	O76003	335 aa	Known RBP	28.29	■■■□□ 2.12
CIRBP-231	ENST00000591097	PLCG2	P16885	1265 aa		28.29	■■■□□ 2.12
CIRBP-231	ENST00000591097	ECE1	P42892	770 aa		28.29	■■■□□ 2.12
CIRBP-231	ENST00000591097	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	28.29	■■■□□ 2.12
CIRBP-231	ENST00000591097	SH3BP5L	Q7L8J4	393 aa		28.29	■■■□□ 2.12
CIRBP-231	ENST00000591097	MIGA1	Q8NAN2	632 aa		28.29	■■■□□ 2.12
CIRBP-231	ENST00000591097	MYH7	P12883	1935 aa		28.29	■■■□□ 2.12
CIRBP-231	ENST00000591097	DYNLL1	P63167	89 aa	Known RBP	28.28	■■■□□ 2.12
CIRBP-231	ENST00000591097	PICALM	Q13492	652 aa		28.28	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms