RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 USP47Q96K76 1375 aa10.68□□□□□ -0.7
NEDD4L-230ENST00000590638 H3BM21 787 aa10.68□□□□□ -0.7
NEDD4L-230ENST00000590638 J3QW42 95 aa10.68□□□□□ -0.7
NEDD4L-230ENST00000590638 C2CD2LO14523 706 aa10.68□□□□□ -0.7
NEDD4L-230ENST00000590638 ZKSCAN3Q9BRR0 538 aa10.68□□□□□ -0.7
NEDD4L-230ENST00000590638 IGSF5Q9NSI5 407 aa10.68□□□□□ -0.7
NEDD4L-230ENST00000590638 NRXN1Q9ULB1 1477 aa10.68□□□□□ -0.7
NEDD4L-230ENST00000590638 C3P01024 1663 aa10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 ARAFP10398 606 aa10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 ZNF76P36508 570 aa10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 FCGRTP55899 365 aa10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 PEAR1Q5VY43 1037 aaPredicted RBP10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 DTHD1Q6ZMT9 781 aa10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 RNF34Q969K3 372 aa10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 METTL5Q9NRN9 209 aaKnown RBP10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 NEXMIFQ5QGS0 1516 aa10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 POLR1AO95602 1720 aaPredicted RBP10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 ZFYVE9O95405 1425 aa10.67□□□□□ -0.7
NEDD4L-230ENST00000590638 TNRQ92752 1358 aa10.66□□□□□ -0.7
NEDD4L-230ENST00000590638 ADGRF5Q8IZF2 1346 aa10.66□□□□□ -0.7
NEDD4L-230ENST00000590638 CPB1P15086 417 aa10.66□□□□□ -0.7
NEDD4L-230ENST00000590638 GAS6Q14393 721 aa10.66□□□□□ -0.7
NEDD4L-230ENST00000590638 FAM35AQ86V20 835 aa10.66□□□□□ -0.7
NEDD4L-230ENST00000590638 CEP120Q8N960 986 aa10.66□□□□□ -0.7
NEDD4L-230ENST00000590638 KDM5AP29375 1690 aaKnown RBP10.66□□□□□ -0.7
NEDD4L-230ENST00000590638 FAM177BA6PVY3 158 aa10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 ZBTB42B2RXF5 422 aa10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 SMNDC1O75940 238 aaKnown RBP eCLIP10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 CTSHP09668 335 aa10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 ACPPP15309 386 aa10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 ERCC5P28715 1186 aaPredicted RBP10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 TAF1CQ15572 869 aaPredicted RBP10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 ASAP3Q8TDY4 903 aa10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 OXCT2Q9BYC2 517 aaPredicted RBP10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 DZANK1Q9NVP4 752 aa10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 SLC6A14Q9UN76 642 aa10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 TTF2Q9UNY4 1162 aaKnown RBP10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 AKAP2Q9Y2D5 859 aa10.65□□□□□ -0.7
NEDD4L-230ENST00000590638 A2ML1A8K2U0 1454 aa10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 NEURL1BA8MQ27 555 aa10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 TRPA1O75762 1119 aa10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 XRCC5P13010 732 aaKnown RBP10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 ADH7P40394 386 aa10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 HDLBPQ00341 1268 aaKnown RBP10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 C9orf131Q5VYM1 1079 aa10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 PRPF40BQ6NWY9 871 aaKnown RBP10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 ELMSAN1Q6PJG2 1045 aa10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 GPR161Q8N6U8 529 aaKnown RBP10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 TNFRSF25Q93038 417 aa10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 COL25A1Q9BXS0 654 aaPredicted RBP10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 PBX4Q9BYU1 374 aa10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 PIK3C2GO75747 1445 aa10.64□□□□□ -0.71
NEDD4L-230ENST00000590638 NLRP1Q9C000 1473 aa10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 TMEM238LA0A1B0GVL6 79 aa10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 PDE2AO00408 941 aaPredicted RBP10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 ALAS2P22557 587 aa10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 RASSF4Q9H2L5 321 aa10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 C14orf93Q9H972 538 aaKnown RBP10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 ZFYVE1Q9HBF4 777 aa10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 SETBP1Q9Y6X0 1596 aa10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 DISP3Q9P2K9 1392 aa10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 IQGAP1P46940 1657 aa10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 RIMS1Q86UR5 1692 aaKnown RBP10.63□□□□□ -0.71
NEDD4L-230ENST00000590638 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 TERTO14746 1132 aaKnown RBP10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 CEBPAP49715 358 aaPredicted RBP10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 ATP11AP98196 1134 aa10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 FANCCQ00597 558 aa10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 MEI1Q5TIA1 1274 aa10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 CEP135Q66GS9 1140 aa10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 CCNJLQ8IV13 435 aa10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 TMEM102Q8N9M5 508 aaPredicted RBP10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 CNTNAP3BQ96NU0 1288 aa10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 CNTNAP3Q9BZ76 1288 aa10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 GGA1Q9UJY5 639 aa10.62□□□□□ -0.71
NEDD4L-230ENST00000590638 SCAF11Q99590 1463 aaKnown RBP10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 LDLRAD1Q5T700 205 aa10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 ILDR2Q71H61 639 aa10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 HS2ST1Q7LGA3 356 aa10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 GOLGA6L1Q8N7Z2 621 aa10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 GLIS3Q8NEA6 775 aa10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 IRF7Q92985 503 aa10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 PLD4Q96BZ4 506 aa10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 TCF12Q99081 682 aa10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 GDF2Q9UK05 429 aaPredicted RBP10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 EIF3AQ14152 1382 aaKnown RBP10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 CCDC7Q96M83 1385 aa10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 UBR1Q8IWV7 1749 aa10.61□□□□□ -0.71
NEDD4L-230ENST00000590638 WASHC2AQ641Q2 1341 aa10.6□□□□□ -0.71
NEDD4L-230ENST00000590638 RIMS2Q9UQ26 1411 aa10.6□□□□□ -0.71
NEDD4L-230ENST00000590638 ADARB2-AS1A8MUL3 147 aa10.6□□□□□ -0.71
NEDD4L-230ENST00000590638 VSIG8P0DPA2 414 aa10.6□□□□□ -0.71
NEDD4L-230ENST00000590638 ST13P50502 369 aaKnown RBP10.6□□□□□ -0.71
NEDD4L-230ENST00000590638 NT5DC4Q86YG4 428 aa10.6□□□□□ -0.71
NEDD4L-230ENST00000590638 SMG9Q9H0W8 520 aaKnown RBP10.6□□□□□ -0.71
NEDD4L-230ENST00000590638 ABCB6Q9NP58 842 aa10.6□□□□□ -0.71
NEDD4L-230ENST00000590638 USP31Q70CQ4 1352 aa10.6□□□□□ -0.71
NEDD4L-230ENST00000590638 ELOA3CA0A087WX78 387 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms