RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ARAP2Q8WZ64 1704 aa14□□□□□ -0.17
SMAD4-211ENST00000590499 TMEM88BA6NKF7 163 aa13.99□□□□□ -0.17
SMAD4-211ENST00000590499 TRAF5O00463 557 aa13.99□□□□□ -0.17
SMAD4-211ENST00000590499 PDE8BO95263 885 aa13.99□□□□□ -0.17
SMAD4-211ENST00000590499 USP17L8P0C7I0 530 aa13.99□□□□□ -0.17
SMAD4-211ENST00000590499 RLBP1P12271 317 aa13.99□□□□□ -0.17
SMAD4-211ENST00000590499 FGFR2P21802 821 aa13.99□□□□□ -0.17
SMAD4-211ENST00000590499 GTF2IP78347 998 aa13.99□□□□□ -0.17
SMAD4-211ENST00000590499 METTL24Q5JXM2 366 aa13.99□□□□□ -0.17
SMAD4-211ENST00000590499 TTLL5Q6EMB2 1281 aa13.99□□□□□ -0.17
SMAD4-211ENST00000590499 FAM84BQ96KN1 310 aaPredicted RBP13.99□□□□□ -0.17
SMAD4-211ENST00000590499 GLIS2Q9BZE0 524 aaPredicted RBP13.99□□□□□ -0.17
SMAD4-211ENST00000590499 CIAO1O76071 339 aa13.98□□□□□ -0.17
SMAD4-211ENST00000590499 GYG1P46976 350 aa13.98□□□□□ -0.17
SMAD4-211ENST00000590499 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
SMAD4-211ENST00000590499 CERS5Q8N5B7 392 aa13.98□□□□□ -0.17
SMAD4-211ENST00000590499 JMYQ8N9B5 988 aa13.98□□□□□ -0.17
SMAD4-211ENST00000590499 TDRD7Q8NHU6 1098 aaKnown RBP13.98□□□□□ -0.17
SMAD4-211ENST00000590499 COPRSQ9NQ92 184 aa13.98□□□□□ -0.17
SMAD4-211ENST00000590499 CNTNAP1P78357 1384 aa13.97□□□□□ -0.17
SMAD4-211ENST00000590499 ASTN2O75129 1339 aaPredicted RBP13.97□□□□□ -0.17
SMAD4-211ENST00000590499 FAM205AQ6ZU69 1335 aa13.97□□□□□ -0.17
SMAD4-211ENST00000590499 FKBP1AP62942 108 aaKnown RBP13.97□□□□□ -0.17
SMAD4-211ENST00000590499 RBM26Q5T8P6 1007 aaKnown RBP13.97□□□□□ -0.17
SMAD4-211ENST00000590499 CST9Q5W186 159 aa13.97□□□□□ -0.17
SMAD4-211ENST00000590499 CDC37L1Q7L3B6 337 aa13.97□□□□□ -0.17
SMAD4-211ENST00000590499 FBXO33Q7Z6M2 555 aa13.97□□□□□ -0.17
SMAD4-211ENST00000590499 DZIP1LQ8IYY4 767 aaKnown RBP13.97□□□□□ -0.17
SMAD4-211ENST00000590499 MYOZ2Q9NPC6 264 aa13.97□□□□□ -0.17
SMAD4-211ENST00000590499 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
SMAD4-211ENST00000590499 SASH1O94885 1247 aa13.96□□□□□ -0.17
SMAD4-211ENST00000590499 GNAI2P04899 355 aa13.96□□□□□ -0.17
SMAD4-211ENST00000590499 HIBADHP31937 336 aaKnown RBP13.96□□□□□ -0.17
SMAD4-211ENST00000590499 MMP14P50281 582 aa13.96□□□□□ -0.17
SMAD4-211ENST00000590499 PUM3Q15397 648 aaKnown RBP13.96□□□□□ -0.17
SMAD4-211ENST00000590499 KCNV2Q8TDN2 545 aa13.96□□□□□ -0.17
SMAD4-211ENST00000590499 SIL1Q9H173 461 aa13.96□□□□□ -0.17
SMAD4-211ENST00000590499 GGA3Q9NZ52 723 aa13.96□□□□□ -0.17
SMAD4-211ENST00000590499 PA2G4Q9UQ80 394 aaKnown RBP13.96□□□□□ -0.17
SMAD4-211ENST00000590499 ECM29Q5VYK3 1845 aa13.96□□□□□ -0.17
SMAD4-211ENST00000590499 SRGAP3O43295 1099 aa13.95□□□□□ -0.18
SMAD4-211ENST00000590499 SCARF1Q14162 830 aa13.95□□□□□ -0.18
SMAD4-211ENST00000590499 KIAA0825Q8IV33 1275 aa13.95□□□□□ -0.18
SMAD4-211ENST00000590499 FTSJ3Q8IY81 847 aaKnown RBP13.95□□□□□ -0.18
SMAD4-211ENST00000590499 ZBED3Q96IU2 234 aaPredicted RBP13.95□□□□□ -0.18
SMAD4-211ENST00000590499 PITPNM2Q9BZ72 1349 aa13.94□□□□□ -0.18
SMAD4-211ENST00000590499 PNMA6EA0A0J9YXQ4 647 aa13.94□□□□□ -0.18
SMAD4-211ENST00000590499 RASSF10A6NK89 507 aa13.94□□□□□ -0.18
SMAD4-211ENST00000590499 ADM5C9JUS6 153 aa13.94□□□□□ -0.18
SMAD4-211ENST00000590499 IL15P40933 162 aaPredicted RBP13.94□□□□□ -0.18
SMAD4-211ENST00000590499 DLK2Q6UY11 383 aa13.94□□□□□ -0.18
SMAD4-211ENST00000590499 KRT26Q7Z3Y9 468 aa13.94□□□□□ -0.18
SMAD4-211ENST00000590499 USP48Q86UV5 1035 aa13.94□□□□□ -0.18
SMAD4-211ENST00000590499 OGFOD1Q8N543 542 aa13.94□□□□□ -0.18
SMAD4-211ENST00000590499 PRKD2Q9BZL6 878 aa13.94□□□□□ -0.18
SMAD4-211ENST00000590499 MKRN1Q9UHC7 482 aaKnown RBP13.94□□□□□ -0.18
SMAD4-211ENST00000590499 JAG2Q9Y219 1238 aa13.94□□□□□ -0.18
SMAD4-211ENST00000590499 THSD7BQ9C0I4 1608 aa13.93□□□□□ -0.18
SMAD4-211ENST00000590499 WNT10BO00744 389 aa13.93□□□□□ -0.18
SMAD4-211ENST00000590499 NRG2O14511 850 aaPredicted RBP13.93□□□□□ -0.18
SMAD4-211ENST00000590499 ZBTB7BO15156 539 aaPredicted RBP13.93□□□□□ -0.18
SMAD4-211ENST00000590499 CELF2O95319 508 aaKnown RBP13.93□□□□□ -0.18
SMAD4-211ENST00000590499 IFIT1P09914 478 aaKnown RBP13.93□□□□□ -0.18
SMAD4-211ENST00000590499 OSBPP22059 807 aa13.93□□□□□ -0.18
SMAD4-211ENST00000590499 NBPF9Q3BBW0 867 aa13.93□□□□□ -0.18
SMAD4-211ENST00000590499 TJAP1Q5JTD0 557 aa13.93□□□□□ -0.18
SMAD4-211ENST00000590499 ANGEL2Q5VTE6 544 aaKnown RBP13.93□□□□□ -0.18
SMAD4-211ENST00000590499 PANK1Q8TE04 598 aa13.93□□□□□ -0.18
SMAD4-211ENST00000590499 LPIN2Q92539 896 aa13.93□□□□□ -0.18
SMAD4-211ENST00000590499 DCPSQ96C86 337 aaKnown RBP13.93□□□□□ -0.18
SMAD4-211ENST00000590499 COL1A1P02452 1464 aaPredicted RBP13.93□□□□□ -0.18
SMAD4-211ENST00000590499 SLC5A1P13866 664 aa13.92□□□□□ -0.18
SMAD4-211ENST00000590499 CAVIN4Q5BKX8 364 aa13.92□□□□□ -0.18
SMAD4-211ENST00000590499 ITPRIPQ8IWB1 547 aa13.92□□□□□ -0.18
SMAD4-211ENST00000590499 MTMR14Q8NCE2 650 aa13.92□□□□□ -0.18
SMAD4-211ENST00000590499 CEP126Q9P2H0 1117 aa13.92□□□□□ -0.18
SMAD4-211ENST00000590499 RCAN3Q9UKA8 241 aa13.92□□□□□ -0.18
SMAD4-211ENST00000590499 HDAC9Q9UKV0 1011 aa13.92□□□□□ -0.18
SMAD4-211ENST00000590499 TLL2Q9Y6L7 1015 aa13.92□□□□□ -0.18
SMAD4-211ENST00000590499 ATP2B3Q16720 1220 aa13.91□□□□□ -0.18
SMAD4-211ENST00000590499 MFSD14BQ5SR56 506 aa13.91□□□□□ -0.18
SMAD4-211ENST00000590499 SAPCD2Q86UD0 394 aa13.91□□□□□ -0.18
SMAD4-211ENST00000590499 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
SMAD4-211ENST00000590499 SULF1Q8IWU6 871 aa13.91□□□□□ -0.18
SMAD4-211ENST00000590499 SSH3Q8TE77 659 aa13.91□□□□□ -0.18
SMAD4-211ENST00000590499 ABT1Q9ULW3 272 aaKnown RBP13.91□□□□□ -0.18
SMAD4-211ENST00000590499 IQSEC3Q9UPP2 1182 aaPredicted RBP13.91□□□□□ -0.18
SMAD4-211ENST00000590499 VEGFBP49765 207 aa13.9□□□□□ -0.18
SMAD4-211ENST00000590499 DEFB115Q30KQ5 88 aa13.9□□□□□ -0.18
SMAD4-211ENST00000590499 CDCA5Q96FF9 252 aa13.9□□□□□ -0.18
SMAD4-211ENST00000590499 C1orf115Q9H7X2 142 aa13.9□□□□□ -0.18
SMAD4-211ENST00000590499 PCDHAC2Q9Y5I4 1007 aa13.9□□□□□ -0.18
SMAD4-211ENST00000590499 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.9□□□□□ -0.18
SMAD4-211ENST00000590499 F8W031 263 aaPredicted RBP13.89□□□□□ -0.19
SMAD4-211ENST00000590499 ATP8B2P98198 1209 aa13.89□□□□□ -0.19
SMAD4-211ENST00000590499 GRIK5Q16478 980 aa13.89□□□□□ -0.19
SMAD4-211ENST00000590499 HHIPL1Q96JK4 782 aa13.89□□□□□ -0.19
SMAD4-211ENST00000590499 ZNF408Q9H9D4 720 aa13.89□□□□□ -0.19
SMAD4-211ENST00000590499 AOX1Q06278 1338 aa13.89□□□□□ -0.19
SMAD4-211ENST00000590499 PAPPA2Q9BXP8 1791 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms