RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 ZNF112Q9UJU3 913 aa13.02□□□□□ -0.33
RETREG3-209ENST00000590035 DAGLAQ9Y4D2 1042 aa13.02□□□□□ -0.33
RETREG3-209ENST00000590035 TRIM17Q9Y577 477 aa13.02□□□□□ -0.33
RETREG3-209ENST00000590035 SLC5A1P13866 664 aa13.01□□□□□ -0.33
RETREG3-209ENST00000590035 SP3Q02447 781 aa13.01□□□□□ -0.33
RETREG3-209ENST00000590035 MTX1Q13505 466 aa13.01□□□□□ -0.33
RETREG3-209ENST00000590035 PRPF38BQ5VTL8 546 aaKnown RBP13.01□□□□□ -0.33
RETREG3-209ENST00000590035 CD99L2Q8TCZ2 262 aa13.01□□□□□ -0.33
RETREG3-209ENST00000590035 NOB1Q9ULX3 412 aaKnown RBP13.01□□□□□ -0.33
RETREG3-209ENST00000590035 PDS5AQ29RF7 1337 aaKnown RBP13□□□□□ -0.33
RETREG3-209ENST00000590035 CCL15-CCL14A0A0B4J2E2 113 aa13□□□□□ -0.33
RETREG3-209ENST00000590035 FRAT2O75474 233 aaPredicted RBP13□□□□□ -0.33
RETREG3-209ENST00000590035 UBTFL1P0CB47 393 aaPredicted RBP13□□□□□ -0.33
RETREG3-209ENST00000590035 PRDX5P30044 214 aa13□□□□□ -0.33
RETREG3-209ENST00000590035 RARSP54136 660 aaKnown RBP13□□□□□ -0.33
RETREG3-209ENST00000590035 MKRN4PQ13434 485 aaPredicted RBP13□□□□□ -0.33
RETREG3-209ENST00000590035 CCL15Q16663 113 aa13□□□□□ -0.33
RETREG3-209ENST00000590035 INTS3Q68E01 1043 aaKnown RBP13□□□□□ -0.33
RETREG3-209ENST00000590035 ERO1BQ86YB8 467 aa13□□□□□ -0.33
RETREG3-209ENST00000590035 FAM151AQ8WW52 585 aa13□□□□□ -0.33
RETREG3-209ENST00000590035 ARHGAP45Q92619 1136 aa13□□□□□ -0.33
RETREG3-209ENST00000590035 LRRFIP2Q9Y608 721 aaKnown RBP13□□□□□ -0.33
RETREG3-209ENST00000590035 ZSWIM8A7E2V4 1837 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 CEP290O15078 2479 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 GAKO14976 1311 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 ADGRA2Q96PE1 1338 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 CCER2I3L3R5 266 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 IRF6O14896 467 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 SEMA3EO15041 775 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 IL15P40933 162 aaPredicted RBP12.99□□□□□ -0.33
RETREG3-209ENST00000590035 PHKA1P46020 1223 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 NFIAQ12857 509 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 PPIL2Q13356 520 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 MOGSQ13724 837 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 DIXDC1Q155Q3 683 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 ATP2B3Q16720 1220 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 CDC42EP5Q6NZY7 148 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 ZKSCAN4Q969J2 545 aaPredicted RBP12.99□□□□□ -0.33
RETREG3-209ENST00000590035 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 WRNIP1Q96S55 665 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 MEIS3Q99687 375 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 API5Q9BZZ5 524 aaKnown RBP12.99□□□□□ -0.33
RETREG3-209ENST00000590035 EFCC1Q9HA90 598 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 FAM198AQ9UFP1 575 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 KCNH4Q9UQ05 1017 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 PA2G4Q9UQ80 394 aaKnown RBP12.99□□□□□ -0.33
RETREG3-209ENST00000590035 CSADQ9Y600 493 aa12.99□□□□□ -0.33
RETREG3-209ENST00000590035 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
RETREG3-209ENST00000590035 BTBD19C9JJ37 291 aa12.98□□□□□ -0.33
RETREG3-209ENST00000590035 MAP3K10Q02779 954 aa12.98□□□□□ -0.33
RETREG3-209ENST00000590035 PPATQ06203 517 aa12.98□□□□□ -0.33
RETREG3-209ENST00000590035 TAF1CQ15572 869 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-209ENST00000590035 NOL9Q5SY16 702 aaKnown RBP12.98□□□□□ -0.33
RETREG3-209ENST00000590035 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
RETREG3-209ENST00000590035 SIL1Q9H173 461 aa12.98□□□□□ -0.33
RETREG3-209ENST00000590035 TMOD2Q9NZR1 351 aa12.98□□□□□ -0.33
RETREG3-209ENST00000590035 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
RETREG3-209ENST00000590035 MYH2Q9UKX2 1941 aa12.98□□□□□ -0.33
RETREG3-209ENST00000590035 TLR2O60603 784 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 CETPP11597 493 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 ADORA1P30542 326 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 INPP5BP32019 993 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 DCAF15Q66K64 600 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
RETREG3-209ENST00000590035 ZNF333Q96JL9 665 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 IDI2Q9BXS1 227 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 ZNF341Q9BYN7 854 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 ZFYVE28Q9HCC9 887 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
RETREG3-209ENST00000590035 DENND2AQ9ULE3 1009 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.97□□□□□ -0.33
RETREG3-209ENST00000590035 DOCK2Q92608 1830 aa12.97□□□□□ -0.33
RETREG3-209ENST00000590035 PHF20L1A8MW92 1017 aa12.96□□□□□ -0.33
RETREG3-209ENST00000590035 SNAPC2Q13487 334 aa12.96□□□□□ -0.33
RETREG3-209ENST00000590035 RASGRF1Q13972 1273 aa12.96□□□□□ -0.33
RETREG3-209ENST00000590035 CCDC102BQ68D86 513 aa12.96□□□□□ -0.33
RETREG3-209ENST00000590035 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
RETREG3-209ENST00000590035 ZFPM1Q8IX07 1006 aa12.96□□□□□ -0.33
RETREG3-209ENST00000590035 ZNF384Q8TF68 577 aa12.96□□□□□ -0.33
RETREG3-209ENST00000590035 PTPRFP10586 1907 aa12.96□□□□□ -0.34
RETREG3-209ENST00000590035 PHIPQ8WWQ0 1821 aa12.95□□□□□ -0.34
RETREG3-209ENST00000590035 LDHBP07195 334 aaKnown RBP12.95□□□□□ -0.34
RETREG3-209ENST00000590035 C17orf99Q6UX52 265 aa12.95□□□□□ -0.34
RETREG3-209ENST00000590035 MIGA2Q7L4E1 593 aa12.95□□□□□ -0.34
RETREG3-209ENST00000590035 ARHGAP39Q9C0H5 1083 aa12.95□□□□□ -0.34
RETREG3-209ENST00000590035 HDAC5Q9UQL6 1122 aa12.95□□□□□ -0.34
RETREG3-209ENST00000590035 ENTPD3O75355 529 aa12.94□□□□□ -0.34
RETREG3-209ENST00000590035 WDHD1O75717 1129 aaPredicted RBP12.94□□□□□ -0.34
RETREG3-209ENST00000590035 CTGFP29279 349 aa12.94□□□□□ -0.34
RETREG3-209ENST00000590035 LACTBP83111 547 aaPredicted RBP12.94□□□□□ -0.34
RETREG3-209ENST00000590035 ANKRD23Q86SG2 305 aa12.94□□□□□ -0.34
RETREG3-209ENST00000590035 GNL3LQ9NVN8 582 aaKnown RBP12.94□□□□□ -0.34
RETREG3-209ENST00000590035 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
RETREG3-209ENST00000590035 RANBP2P49792 3224 aaKnown RBP12.93□□□□□ -0.34
RETREG3-209ENST00000590035 GNAI3P08754 354 aa12.93□□□□□ -0.34
RETREG3-209ENST00000590035 TRIM27P14373 513 aa12.93□□□□□ -0.34
RETREG3-209ENST00000590035 RHBDL3P58872 404 aa12.93□□□□□ -0.34
RETREG3-209ENST00000590035 TIMM10P62072 90 aa12.93□□□□□ -0.34
RETREG3-209ENST00000590035 TCP10Q12799 353 aa12.93□□□□□ -0.34
RETREG3-209ENST00000590035 GPAT2Q6NUI2 795 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms