RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 MIER1Q8N108 512 aa22.39■■□□□ 1.17
H3F3B-209ENST00000589949 FRAT1Q92837 279 aaPredicted RBP22.39■■□□□ 1.17
H3F3B-209ENST00000589949 CLUAP1Q96AJ1 413 aa22.39■■□□□ 1.17
H3F3B-209ENST00000589949 WRNIP1Q96S55 665 aa22.39■■□□□ 1.17
H3F3B-209ENST00000589949 FAM198AQ9UFP1 575 aa22.39■■□□□ 1.17
H3F3B-209ENST00000589949 HDAC5Q9UQL6 1122 aa22.39■■□□□ 1.17
H3F3B-209ENST00000589949 SPDYE5A6NIY4 337 aa22.38■■□□□ 1.17
H3F3B-209ENST00000589949 LDHBP07195 334 aaKnown RBP22.38■■□□□ 1.17
H3F3B-209ENST00000589949 TCP10Q12799 353 aa22.38■■□□□ 1.17
H3F3B-209ENST00000589949 ATF7IPQ6VMQ6 1270 aa22.38■■□□□ 1.17
H3F3B-209ENST00000589949 OTOP1Q7RTM1 612 aa22.38■■□□□ 1.17
H3F3B-209ENST00000589949 ZFPM1Q8IX07 1006 aa22.38■■□□□ 1.17
H3F3B-209ENST00000589949 FAM43AQ8N2R8 423 aa22.38■■□□□ 1.17
H3F3B-209ENST00000589949 GNL3LQ9NVN8 582 aaKnown RBP22.38■■□□□ 1.17
H3F3B-209ENST00000589949 DENND2AQ9ULE3 1009 aa22.38■■□□□ 1.17
H3F3B-209ENST00000589949 CSADQ9Y600 493 aa22.38■■□□□ 1.17
H3F3B-209ENST00000589949 RPAP1Q9BWH6 1393 aaPredicted RBP22.38■■□□□ 1.17
H3F3B-209ENST00000589949 CCL15-CCL14A0A0B4J2E2 113 aa22.37■■□□□ 1.17
H3F3B-209ENST00000589949 PNMA6EA0A0J9YXQ4 647 aa22.37■■□□□ 1.17
H3F3B-209ENST00000589949 INPP5BP32019 993 aa22.37■■□□□ 1.17
H3F3B-209ENST00000589949 CCL15Q16663 113 aa22.37■■□□□ 1.17
H3F3B-209ENST00000589949 CD99L2Q8TCZ2 262 aa22.37■■□□□ 1.17
H3F3B-209ENST00000589949 FAM151AQ8WW52 585 aa22.37■■□□□ 1.17
H3F3B-209ENST00000589949 TRIM17Q9Y577 477 aa22.37■■□□□ 1.17
H3F3B-209ENST00000589949 A0A1B0GUL7 405 aa22.36■■□□□ 1.17
H3F3B-209ENST00000589949 SEMA3EO15041 775 aa22.36■■□□□ 1.17
H3F3B-209ENST00000589949 ZBTB22O15209 634 aa22.36■■□□□ 1.17
H3F3B-209ENST00000589949 GTF2A2P52657 109 aa22.36■■□□□ 1.17
H3F3B-209ENST00000589949 XAGE2Q96GT9 111 aa22.36■■□□□ 1.17
H3F3B-209ENST00000589949 USP40Q9NVE5 1235 aa22.36■■□□□ 1.17
H3F3B-209ENST00000589949 IRF6O14896 467 aa22.35■■□□□ 1.17
H3F3B-209ENST00000589949 IPO8O15397 1037 aaKnown RBP22.35■■□□□ 1.17
H3F3B-209ENST00000589949 OTUD7BQ6GQQ9 843 aa22.35■■□□□ 1.17
H3F3B-209ENST00000589949 ERO1BQ86YB8 467 aa22.34■■□□□ 1.17
H3F3B-209ENST00000589949 TMEM57Q8N5G2 664 aa22.34■■□□□ 1.17
H3F3B-209ENST00000589949 ZNF384Q8TF68 577 aa22.34■■□□□ 1.17
H3F3B-209ENST00000589949 GAKO14976 1311 aa22.33■■□□□ 1.17
H3F3B-209ENST00000589949 GNAI2P04899 355 aa22.33■■□□□ 1.17
H3F3B-209ENST00000589949 SP3Q02447 781 aa22.33■■□□□ 1.17
H3F3B-209ENST00000589949 PI16Q6UXB8 463 aa22.33■■□□□ 1.17
H3F3B-209ENST00000589949 ZNF341Q9BYN7 854 aa22.33■■□□□ 1.17
H3F3B-209ENST00000589949 ZNF112Q9UJU3 913 aa22.33■■□□□ 1.17
H3F3B-209ENST00000589949 CENPFP49454 3210 aa22.33■■□□□ 1.17
H3F3B-209ENST00000589949 SLURP2P0DP57 97 aa22.32■■□□□ 1.16
H3F3B-209ENST00000589949 TAF1CQ15572 869 aaPredicted RBP22.32■■□□□ 1.16
H3F3B-209ENST00000589949 DCAF15Q66K64 600 aa22.32■■□□□ 1.16
H3F3B-209ENST00000589949 RFX7Q2KHR2 1363 aa22.32■■□□□ 1.16
H3F3B-209ENST00000589949 ATRNL1Q5VV63 1379 aa22.32■■□□□ 1.16
H3F3B-209ENST00000589949 PDS5AQ29RF7 1337 aaKnown RBP22.31■■□□□ 1.16
H3F3B-209ENST00000589949 MYH2Q9UKX2 1941 aa22.31■■□□□ 1.16
H3F3B-209ENST00000589949 BTBD19C9JJ37 291 aa22.31■■□□□ 1.16
H3F3B-209ENST00000589949 HNRNPUQ00839 825 aaKnown RBP eCLIP22.31■■□□□ 1.16
H3F3B-209ENST00000589949 PPIL2Q13356 520 aa22.31■■□□□ 1.16
H3F3B-209ENST00000589949 SH3BP5LQ7L8J4 393 aa22.31■■□□□ 1.16
H3F3B-209ENST00000589949 HOOK2Q96ED9 719 aa22.31■■□□□ 1.16
H3F3B-209ENST00000589949 ERO1AQ96HE7 468 aa22.31■■□□□ 1.16
H3F3B-209ENST00000589949 ABCF2Q9UG63 623 aa22.31■■□□□ 1.16
H3F3B-209ENST00000589949 PTPN22Q9Y2R2 807 aa22.31■■□□□ 1.16
H3F3B-209ENST00000589949 RGS3P49796 1198 aa22.3■■□□□ 1.16
H3F3B-209ENST00000589949 NEUROD6Q96NK8 337 aa22.3■■□□□ 1.16
H3F3B-209ENST00000589949 DDX4Q9NQI0 724 aaKnown RBP22.3■■□□□ 1.16
H3F3B-209ENST00000589949 HMG20BQ9P0W2 317 aa22.3■■□□□ 1.16
H3F3B-209ENST00000589949 AKAP2Q9Y2D5 859 aa22.3■■□□□ 1.16
H3F3B-209ENST00000589949 CETPP11597 493 aa22.29■■□□□ 1.16
H3F3B-209ENST00000589949 SNAPC2Q13487 334 aa22.29■■□□□ 1.16
H3F3B-209ENST00000589949 MVPQ14764 893 aaKnown RBP22.29■■□□□ 1.16
H3F3B-209ENST00000589949 ZKSCAN2Q63HK3 967 aa22.29■■□□□ 1.16
H3F3B-209ENST00000589949 TBC1D9Q6ZT07 1266 aa22.29■■□□□ 1.16
H3F3B-209ENST00000589949 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.29■■□□□ 1.16
H3F3B-209ENST00000589949 FAM163AQ96GL9 167 aaPredicted RBP22.29■■□□□ 1.16
H3F3B-209ENST00000589949 IDI2Q9BXS1 227 aa22.29■■□□□ 1.16
H3F3B-209ENST00000589949 EFCC1Q9HA90 598 aa22.29■■□□□ 1.16
H3F3B-209ENST00000589949 PHF20L1A8MW92 1017 aa22.28■■□□□ 1.16
H3F3B-209ENST00000589949 WDHD1O75717 1129 aaPredicted RBP22.28■■□□□ 1.16
H3F3B-209ENST00000589949 RLBP1P12271 317 aa22.28■■□□□ 1.16
H3F3B-209ENST00000589949 MECOMQ03112 1051 aa22.28■■□□□ 1.16
H3F3B-209ENST00000589949 PPATQ06203 517 aa22.28■■□□□ 1.16
H3F3B-209ENST00000589949 MOGSQ13724 837 aa22.28■■□□□ 1.16
H3F3B-209ENST00000589949 POLA2Q14181 598 aa22.28■■□□□ 1.16
H3F3B-209ENST00000589949 DZIP1Q86YF9 867 aaKnown RBP22.28■■□□□ 1.16
H3F3B-209ENST00000589949 ZGPATQ8N5A5 531 aaKnown RBP22.28■■□□□ 1.16
H3F3B-209ENST00000589949 ZFYVE28Q9HCC9 887 aa22.28■■□□□ 1.16
H3F3B-209ENST00000589949 ZSWIM8A7E2V4 1837 aa22.27■■□□□ 1.16
H3F3B-209ENST00000589949 DDTLA6NHG4 134 aaPredicted RBP22.27■■□□□ 1.16
H3F3B-209ENST00000589949 ARHGAP39Q9C0H5 1083 aa22.27■■□□□ 1.16
H3F3B-209ENST00000589949 AK9Q5TCS8 1911 aa22.27■■□□□ 1.16
H3F3B-209ENST00000589949 POTEFA5A3E0 1075 aa22.26■■□□□ 1.15
H3F3B-209ENST00000589949 ENTPD3O75355 529 aa22.26■■□□□ 1.15
H3F3B-209ENST00000589949 BTDP43251 543 aa22.26■■□□□ 1.15
H3F3B-209ENST00000589949 RHBDL3P58872 404 aa22.26■■□□□ 1.15
H3F3B-209ENST00000589949 NOL9Q5SY16 702 aaKnown RBP22.26■■□□□ 1.15
H3F3B-209ENST00000589949 SPATA5Q8NB90 893 aa22.26■■□□□ 1.15
H3F3B-209ENST00000589949 C1orf115Q9H7X2 142 aa22.26■■□□□ 1.15
H3F3B-209ENST00000589949 KCNH4Q9UQ05 1017 aa22.26■■□□□ 1.15
H3F3B-209ENST00000589949 MROH7-TTC4A0A0A0MT08 1334 aa22.26■■□□□ 1.15
H3F3B-209ENST00000589949 TLR2O60603 784 aa22.25■■□□□ 1.15
H3F3B-209ENST00000589949 ARID4AP29374 1257 aaPredicted RBP22.25■■□□□ 1.15
H3F3B-209ENST00000589949 MCAMP43121 646 aa22.25■■□□□ 1.15
H3F3B-209ENST00000589949 G3BP1Q13283 466 aaKnown RBP eCLIP22.25■■□□□ 1.152e-8■□□□□ 10.3
H3F3B-209ENST00000589949 DIEXFQ68CQ4 756 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms