RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-222	ENST00000589727	VASH1	Q7L8A9	365 aa	Predicted RBP	9.41	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	TRMT44	Q8IYL2	757 aa	Known RBP	9.41	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	ZFP42	Q96MM3	310 aa		9.41	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	EFCC1	Q9HA90	598 aa		9.41	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	MRC1	P22897	1456 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	RAD17	O75943	681 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	STARD3NL	O95772	234 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	NFX1	Q12986	1120 aa	Known RBP	9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	SLC9C1	Q4G0N8	1177 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	C1orf141	Q5JVX7	400 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	NPM2	Q86SE8	214 aa	Known RBP	9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	IL27	Q8NEV9	243 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	ITPKC	Q96DU7	683 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	CDCA5	Q96FF9	252 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	PCMTD1	Q96MG8	357 aa	Predicted RBP	9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	ARHGAP9	Q9BRR9	750 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	STAP2	Q9UGK3	403 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	MAP4K5	Q9Y4K4	846 aa		9.4	□□□□□ -0.9
ATP6V0A1-222	ENST00000589727	TERT	O14746	1132 aa	Known RBP	9.39	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	FSHR	P23945	695 aa		9.39	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	RFC5	P40937	340 aa		9.39	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	MAP3K12	Q12852	859 aa		9.39	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	SCARF1	Q14162	830 aa		9.39	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	9.39	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	CD99L2	Q8TCZ2	262 aa		9.39	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	ZFAND3	Q9H8U3	227 aa		9.39	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	GOPC	Q9HD26	462 aa		9.39	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	ROCK2	O75116	1388 aa	Known RBP	9.38	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	CAMTA2	O94983	1202 aa		9.38	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	SLC39A6	Q13433	755 aa		9.38	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	AMOT	Q4VCS5	1084 aa		9.38	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	TPTE2	Q6XPS3	522 aa		9.38	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	PURB	Q96QR8	312 aa	Known RBP	9.38	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	VPS33B	Q9H267	617 aa		9.38	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	SYNGAP1	Q96PV0	1343 aa		9.37	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	UBE2Q2L	H0YL09	131 aa		9.37	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	USP17L8	P0C7I0	530 aa		9.37	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	EPS8L1	Q8TE68	723 aa		9.37	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	PUS7	Q96PZ0	661 aa	Known RBP	9.37	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	ZNF609	O15014	1411 aa		9.37	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	BDP1	A6H8Y1	2624 aa		9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	PRAMEF22	A3QJZ6	481 aa		9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	TCERG1	O14776	1098 aa	Known RBP	9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	EGFR	P00533	1210 aa		9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	PTK2	Q05397	1052 aa		9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	LRIT3	Q3SXY7	679 aa		9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	MOB2	Q70IA6	237 aa		9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	ZBTB33	Q86T24	672 aa		9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	DPF2	Q92785	391 aa		9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	TMX4	Q9H1E5	349 aa	Predicted RBP	9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	HMX1	Q9NP08	348 aa	Predicted RBP	9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	GGA3	Q9NZ52	723 aa		9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	LAMA2	P24043	3122 aa	Known RBP	9.36	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	GTF2E1	P29083	439 aa	Predicted RBP	9.35	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	IL6ST	P40189	918 aa	Predicted RBP	9.35	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	PNMA1	Q8ND90	353 aa		9.35	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	SUPT20H	Q8NEM7	779 aa		9.35	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	SLC10A4	Q96EP9	437 aa		9.35	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	SLC52A2	Q9HAB3	445 aa		9.35	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	ANKRD26	Q9UPS8	1709 aa		9.35	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	NCOR1	O75376	2440 aa		9.34	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	FAM177B	A6PVY3	158 aa		9.34	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	CRY2	Q49AN0	593 aa		9.34	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	CCDC116	Q8IYX3	515 aa		9.34	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	RPGR	Q92834	1020 aa	Known RBP	9.34	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	SHISA4	Q96DD7	197 aa		9.34	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	NXF1	Q9UBU9	619 aa	Known RBP	9.34	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	PTCH2	Q9Y6C5	1203 aa		9.34	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	RAB3GAP2	Q9H2M9	1393 aa		9.34	□□□□□ -0.91
ATP6V0A1-222	ENST00000589727	IRS2	Q9Y4H2	1338 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	PRUNE2	Q8WUY3	3088 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	SCN7A	Q01118	1682 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	UPP2	O95045	317 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	BMP8B	P34820	402 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	SP3	Q02447	781 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	TCIRG1	Q13488	830 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	ARHGEF6	Q15052	776 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	TPRN	Q4KMQ1	711 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	TMEM259	Q4ZIN3	620 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	C6orf118	Q5T5N4	469 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	CLEC4G	Q6UXB4	293 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	SLC51A	Q86UW1	340 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	DZIP3	Q86Y13	1208 aa	Known RBP	9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	GUCD1	Q96NT3	240 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	CDV3	Q9UKY7	258 aa	Known RBP	9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	ZNF652	Q9Y2D9	606 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	GPSM3	Q9Y4H4	160 aa		9.33	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	HOXA10	P31260	410 aa	Predicted RBP	9.32	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	INHBE	P58166	350 aa		9.32	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	EIF4A2	Q14240	407 aa	Known RBP	9.32	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	KIF4B	Q2VIQ3	1234 aa		9.32	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	UBE2Q1	Q7Z7E8	422 aa		9.32	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	SH3TC2	Q8TF17	1288 aa		9.32	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	KCTD15	Q96SI1	283 aa	Predicted RBP	9.32	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	OCSTAMP	Q9BR26	566 aa		9.32	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	NIP7	Q9Y221	180 aa	Known RBP eCLIP	9.32	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	LAMB4	A4D0S4	1761 aa		9.32	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	ASTN2	O75129	1339 aa	Predicted RBP	9.31	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	MANSC4	A6NHS7	340 aa	Predicted RBP	9.31	□□□□□ -0.92
ATP6V0A1-222	ENST00000589727	BMP2	P12643	396 aa		9.31	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms