RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 NEDD4P46934 1319 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 IL6STP40189 918 aaPredicted RBP12.82□□□□□ -0.36
GFAP-216ENST00000589701 CSPP1Q1MSJ5 1256 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 SLC4A8Q2Y0W8 1093 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 ABCF2Q9UG63 623 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.82□□□□□ -0.36
GFAP-216ENST00000589701 KIF28PB7ZC32 967 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 MBD4O95243 580 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 CCDC192P0DO97 292 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 BARGINQ6ZT62 677 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 AIDAQ96BJ3 306 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 AGXT2Q9BYV1 514 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 CLIC4Q9Y696 253 aa12.82□□□□□ -0.36
GFAP-216ENST00000589701 BAZ2BQ9UIF8 2168 aaKnown RBP12.81□□□□□ -0.36
GFAP-216ENST00000589701 A0A1B0GVL5 298 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 OFD1O75665 1012 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 MCM5P33992 734 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 GYG1P46976 350 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 CCAR1Q8IX12 1150 aaKnown RBP12.81□□□□□ -0.36
GFAP-216ENST00000589701 SPATA5Q8NB90 893 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 EPB41L4AQ9HCS5 686 aaPredicted RBP12.81□□□□□ -0.36
GFAP-216ENST00000589701 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
GFAP-216ENST00000589701 CCDC39Q9UFE4 941 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 CDHR2Q9BYE9 1310 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 DOT1LQ8TEK3 1739 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 CPLX1O14810 134 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 CAMTA2O94983 1202 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 EVX2Q03828 476 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 ISM2Q6H9L7 571 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 ADGRA1Q86SQ6 560 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 NCOA7Q8NI08 942 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 THRAP3Q9Y2W1 955 aaKnown RBP12.81□□□□□ -0.36
GFAP-216ENST00000589701 SALL1Q9NSC2 1324 aa12.81□□□□□ -0.36
GFAP-216ENST00000589701 IGSF3O75054 1194 aa12.8□□□□□ -0.36
GFAP-216ENST00000589701 CDC27P30260 824 aa12.8□□□□□ -0.36
GFAP-216ENST00000589701 PUM3Q15397 648 aaKnown RBP12.8□□□□□ -0.36
GFAP-216ENST00000589701 SDR42E1Q8WUS8 393 aa12.8□□□□□ -0.36
GFAP-216ENST00000589701 TSC1Q92574 1164 aa12.8□□□□□ -0.36
GFAP-216ENST00000589701 UTP14AQ9BVJ6 771 aaKnown RBP12.8□□□□□ -0.36
GFAP-216ENST00000589701 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.8□□□□□ -0.36
GFAP-216ENST00000589701 CBX8Q9HC52 389 aa12.8□□□□□ -0.36
GFAP-216ENST00000589701 MYH3P11055 1940 aa12.8□□□□□ -0.36
GFAP-216ENST00000589701 KLRK1P26718 216 aa12.8□□□□□ -0.36
GFAP-216ENST00000589701 CBX1P83916 185 aa12.8□□□□□ -0.36
GFAP-216ENST00000589701 LCORLQ8N3X6 602 aa12.8□□□□□ -0.36
GFAP-216ENST00000589701 ELP1O95163 1332 aa12.8□□□□□ -0.36
GFAP-216ENST00000589701 SPEF2Q9C093 1822 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 MARCKSP29966 332 aaPredicted RBP12.79□□□□□ -0.36
GFAP-216ENST00000589701 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 C11orf57Q6ZUT1 292 aaPredicted RBP12.79□□□□□ -0.36
GFAP-216ENST00000589701 AMIGO3Q86WK7 504 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 C8orf76Q96K31 380 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 CTNNA3Q9UI47 895 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 CYP2D7A0A087X1C5 515 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 UQCRHLA0A096LP55 91 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 TCRBV5S4A2TA0A5A2 114 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 UQCRHP07919 91 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
GFAP-216ENST00000589701 ERFEQ4G0M1 354 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 TAF3Q5VWG9 929 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 TICAM2Q86XR7 235 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
GFAP-216ENST00000589701 LPIN2Q92539 896 aa12.79□□□□□ -0.36
GFAP-216ENST00000589701 ZNF274Q96GC6 653 aaPredicted RBP12.79□□□□□ -0.36
GFAP-216ENST00000589701 STRBPQ96SI9 672 aaKnown RBP12.79□□□□□ -0.36
GFAP-216ENST00000589701 BIN1O00499 593 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 CHRNDQ07001 517 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 NFXL1Q6ZNB6 911 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 MTERF4Q7Z6M4 381 aaKnown RBP12.78□□□□□ -0.36
GFAP-216ENST00000589701 ZNF622Q969S3 477 aaKnown RBP eCLIP12.78□□□□□ -0.36
GFAP-216ENST00000589701 CLSTN2Q9H4D0 955 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 SRP68Q9UHB9 627 aaKnown RBP12.78□□□□□ -0.36
GFAP-216ENST00000589701 MYH7P12883 1935 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 hCG_1642624A0A1W2PR95 340 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 FGFR2P21802 821 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 LRMPQ12912 555 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 TRDNQ13061 729 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 FSIP1Q8NA03 581 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 KCNF1Q9H3M0 494 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 ZSWIM5Q9P217 1185 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 CFAP45Q9UL16 551 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 PYCARDQ9ULZ3 195 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 PCDHA7Q9UN72 937 aa12.78□□□□□ -0.36
GFAP-216ENST00000589701 TNS1Q9HBL0 1735 aaKnown RBP12.78□□□□□ -0.36
GFAP-216ENST00000589701 ERVV-1B6SEH8 477 aa12.77□□□□□ -0.36
GFAP-216ENST00000589701 PTGS1P23219 599 aa12.77□□□□□ -0.36
GFAP-216ENST00000589701 ZNF165P49910 485 aa12.77□□□□□ -0.36
GFAP-216ENST00000589701 TERF1P54274 439 aa12.77□□□□□ -0.36
GFAP-216ENST00000589701 SNW1Q13573 536 aaKnown RBP12.77□□□□□ -0.36
GFAP-216ENST00000589701 LLPHQ9BRT6 129 aaKnown RBP12.77□□□□□ -0.36
GFAP-216ENST00000589701 ZSCAN16Q9H4T2 348 aaPredicted RBP12.77□□□□□ -0.36
GFAP-216ENST00000589701 LRP2BPQ9P2M1 347 aa12.77□□□□□ -0.36
GFAP-216ENST00000589701 MINDY4BA8MYZ0 360 aa12.77□□□□□ -0.37
GFAP-216ENST00000589701 NTSR2O95665 410 aa12.77□□□□□ -0.37
GFAP-216ENST00000589701 HMGN5P82970 282 aaKnown RBP12.77□□□□□ -0.37
GFAP-216ENST00000589701 SASS6Q6UVJ0 657 aa12.77□□□□□ -0.37
GFAP-216ENST00000589701 IFNL3Q8IZI9 196 aa12.77□□□□□ -0.37
GFAP-216ENST00000589701 LINC00116Q8NCU8 138 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms