RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 PHACTR3Q96KR7 559 aa7.37□□□□□ -1.23
LINC01539-202ENST00000589293 PNNQ9H307 717 aaKnown RBP7.37□□□□□ -1.23
LINC01539-202ENST00000589293 GJA3Q9Y6H8 435 aa7.37□□□□□ -1.23
LINC01539-202ENST00000589293 CNTNAP1P78357 1384 aa7.36□□□□□ -1.23
LINC01539-202ENST00000589293 CEMIPQ8WUJ3 1361 aa7.36□□□□□ -1.23
LINC01539-202ENST00000589293 KCNQ3O43525 872 aa7.36□□□□□ -1.23
LINC01539-202ENST00000589293 MAP2K1Q02750 393 aaPredicted RBP7.36□□□□□ -1.23
LINC01539-202ENST00000589293 DEFB115Q30KQ5 88 aa7.36□□□□□ -1.23
LINC01539-202ENST00000589293 GPC2Q8N158 579 aa7.36□□□□□ -1.23
LINC01539-202ENST00000589293 SYNE4Q8N205 404 aa7.36□□□□□ -1.23
LINC01539-202ENST00000589293 RBM17Q96I25 401 aaKnown RBP7.36□□□□□ -1.23
LINC01539-202ENST00000589293 PRDM10Q9NQV6 1147 aa7.36□□□□□ -1.23
LINC01539-202ENST00000589293 DICER1Q9UPY3 1922 aaKnown RBP7.35□□□□□ -1.23
LINC01539-202ENST00000589293 RNF123Q5XPI4 1314 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 MAPK8IP3Q9UPT6 1336 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 FER1L6Q2WGJ9 1857 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 ECE1P42892 770 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 GRM1Q13255 1194 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 EML3Q32P44 896 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 PPP1R42Q7Z4L9 355 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 NIM1KQ8IY84 436 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 CNTROBQ8N137 903 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 LARGE2Q8N3Y3 721 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 PBXIP1Q96AQ6 731 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 ZMIZ1Q9ULJ6 1067 aa7.35□□□□□ -1.23
LINC01539-202ENST00000589293 RRP7AQ9Y3A4 280 aaKnown RBP7.35□□□□□ -1.23
LINC01539-202ENST00000589293 CACNA1SQ13698 1873 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 ANKRD31Q8N7Z5 1873 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 SCN4AP35499 1836 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 PASKQ96RG2 1323 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 ZNF541Q9H0D2 1346 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 PRAMEF22A3QJZ6 481 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 ERVV-1B6SEH8 477 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 TCERG1O14776 1098 aaKnown RBP7.34□□□□□ -1.23
LINC01539-202ENST00000589293 FOXN1O15353 648 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 MYL6BP14649 208 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 VEGFBP49765 207 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 SCNN1DP51172 638 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 PTK7Q13308 1070 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 DCTN1Q14203 1278 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 MAP1SQ66K74 1059 aaPredicted RBP7.34□□□□□ -1.23
LINC01539-202ENST00000589293 MEIOBQ8N635 442 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 SUPT20HQ8NEM7 779 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 AGBL1Q96MI9 1066 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 PSMD1Q99460 953 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 PGPEP1Q9NXJ5 209 aa7.34□□□□□ -1.23
LINC01539-202ENST00000589293 COL11A2P13942 1736 aaPredicted RBP7.34□□□□□ -1.23
LINC01539-202ENST00000589293 COL3A1P02461 1466 aaPredicted RBP7.34□□□□□ -1.23
LINC01539-202ENST00000589293 SLX4Q8IY92 1834 aa7.34□□□□□ -1.24
LINC01539-202ENST00000589293 MAP3K15Q6ZN16 1313 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 KLRG2A4D1S0 409 aaPredicted RBP7.33□□□□□ -1.24
LINC01539-202ENST00000589293 FZD9O00144 591 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 ST8SIA5O15466 376 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 LZTS3O60299 673 aaPredicted RBP7.33□□□□□ -1.24
LINC01539-202ENST00000589293 DGAT1O75907 488 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 GPTP24298 496 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 PPP2R1AP30153 589 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 LBX1P52954 281 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 GTF2IP78347 998 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 USP4Q13107 963 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 OGFOD1Q8N543 542 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 C7orf43Q8WVR3 580 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 NLRP3Q96P20 1036 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 MIS18AQ9NYP9 233 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 DACH1Q9UI36 760 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 NOD1Q9Y239 953 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 BCORQ6W2J9 1755 aa7.33□□□□□ -1.24
LINC01539-202ENST00000589293 WDR33Q9C0J8 1336 aaKnown RBP7.32□□□□□ -1.24
LINC01539-202ENST00000589293 TMEM229AB2RXF0 380 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L15C9J2P7 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L10C9JJH3 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L13C9JLJ4 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L12C9JPN9 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L11C9JVI0 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L21D6R901 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L18D6R9N7 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L22D6RA61 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L17D6RBQ6 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L19D6RCP7 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L20D6RJB6 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 CAPN5O15484 640 aaPredicted RBP7.32□□□□□ -1.24
LINC01539-202ENST00000589293 PPIP5K2O43314 1243 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 ADH1AP07327 375 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 BMP1P13497 986 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 SMCPP49901 116 aaPredicted RBP7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP17L24Q0WX57 530 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 HLFQ16534 295 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 PARP10Q53GL7 1025 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 NBPF10Q6P3W6 841 aaKnown RBP7.32□□□□□ -1.24
LINC01539-202ENST00000589293 OLFM4Q6UX06 510 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 USP50Q70EL3 339 aaPredicted RBP7.32□□□□□ -1.24
LINC01539-202ENST00000589293 TRIM46Q7Z4K8 759 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 CRIPAKQ8N1N5 446 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 NBPF15Q8N660 670 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 ZNF594Q96JF6 807 aaPredicted RBP7.32□□□□□ -1.24
LINC01539-202ENST00000589293 BCL2L13Q9BXK5 485 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 IRX2Q9BZI1 471 aaPredicted RBP7.32□□□□□ -1.24
LINC01539-202ENST00000589293 VRTNQ9H8Y1 702 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 ETNK1Q9HBU6 452 aa7.32□□□□□ -1.24
LINC01539-202ENST00000589293 DDX21Q9NR30 783 aaKnown RBP eCLIP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms