RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 CRKP46108 304 aa29.57■■■□□ 2.32
RFX1-205ENST00000589239 SDR42E1Q8WUS8 393 aa29.57■■■□□ 2.32
RFX1-205ENST00000589239 NOL10Q9BSC4 688 aaKnown RBP29.57■■■□□ 2.32
RFX1-205ENST00000589239 GNAT2P19087 354 aa29.57■■■□□ 2.32
RFX1-205ENST00000589239 MCCP23508 829 aa29.57■■■□□ 2.32
RFX1-205ENST00000589239 PPP4CP60510 307 aa29.57■■■□□ 2.32
RFX1-205ENST00000589239 NECTIN1Q15223 517 aa29.57■■■□□ 2.32
RFX1-205ENST00000589239 HHIPL2Q6UWX4 724 aa29.57■■■□□ 2.32
RFX1-205ENST00000589239 AGBL3Q8NEM8 1001 aa29.57■■■□□ 2.32
RFX1-205ENST00000589239 GSG1L2A8MUP6 293 aa29.56■■■□□ 2.32
RFX1-205ENST00000589239 PATL2C9JE40 543 aaKnown RBP29.56■■■□□ 2.32
RFX1-205ENST00000589239 SH3RF3Q8TEJ3 882 aaPredicted RBP29.56■■■□□ 2.32
RFX1-205ENST00000589239 PCDHAC2Q9Y5I4 1007 aa29.56■■■□□ 2.32
RFX1-205ENST00000589239 ADAMTSL1Q8N6G6 1762 aa29.56■■■□□ 2.32
RFX1-205ENST00000589239 GRIN3BO60391 1043 aa29.56■■■□□ 2.32
RFX1-205ENST00000589239 FGAP02671 866 aa29.56■■■□□ 2.32
RFX1-205ENST00000589239 EPB41L4AQ9HCS5 686 aaPredicted RBP29.56■■■□□ 2.32
RFX1-205ENST00000589239 GJA3Q9Y6H8 435 aa29.56■■■□□ 2.32
RFX1-205ENST00000589239 U3KPZ7 1027 aaPredicted RBP29.56■■■□□ 2.32
RFX1-205ENST00000589239 DICER1Q9UPY3 1922 aaKnown RBP29.55■■■□□ 2.32
RFX1-205ENST00000589239 C9orf131Q5VYM1 1079 aa29.55■■■□□ 2.32
RFX1-205ENST00000589239 MRIQ9BWK5 157 aa29.55■■■□□ 2.32
RFX1-205ENST00000589239 SERPINA10Q9UK55 444 aa29.55■■■□□ 2.32
RFX1-205ENST00000589239 RBM5P52756 815 aaKnown RBP eCLIP29.54■■■□□ 2.32
RFX1-205ENST00000589239 HDLBPQ00341 1268 aaKnown RBP29.54■■■□□ 2.32
RFX1-205ENST00000589239 CREB3L3Q68CJ9 461 aa29.54■■■□□ 2.32
RFX1-205ENST00000589239 APOBEC3HQ6NTF7 200 aaKnown RBP29.54■■■□□ 2.32
RFX1-205ENST00000589239 IFNL3Q8IZI9 196 aa29.54■■■□□ 2.32
RFX1-205ENST00000589239 RASEFQ8IZ41 740 aa29.53■■■□□ 2.32
RFX1-205ENST00000589239 ZDHHC15Q96MV8 337 aa29.53■■■□□ 2.32
RFX1-205ENST00000589239 CRNKL1Q9BZJ0 848 aaKnown RBP29.53■■■□□ 2.32
RFX1-205ENST00000589239 USP17L8P0C7I0 530 aa29.53■■■□□ 2.32
RFX1-205ENST00000589239 OGFOD1Q8N543 542 aa29.53■■■□□ 2.32
RFX1-205ENST00000589239 KIF2CQ99661 725 aa29.53■■■□□ 2.32
RFX1-205ENST00000589239 SLC27A2O14975 620 aa29.52■■■□□ 2.32
RFX1-205ENST00000589239 RHBDL3P58872 404 aa29.52■■■□□ 2.32
RFX1-205ENST00000589239 CFAP100Q494V2 611 aa29.51■■■□□ 2.32
RFX1-205ENST00000589239 HDAC9Q9UKV0 1011 aa29.51■■■□□ 2.32
RFX1-205ENST00000589239 CERS3Q8IU89 383 aa29.51■■■□□ 2.31
RFX1-205ENST00000589239 NACAP1Q9BZK3 213 aa29.51■■■□□ 2.31
RFX1-205ENST00000589239 TAF6LQ9Y6J9 622 aa29.51■■■□□ 2.31
RFX1-205ENST00000589239 CYP21A2P08686 494 aa29.5■■■□□ 2.31
RFX1-205ENST00000589239 GMPSP49915 693 aaPredicted RBP29.5■■■□□ 2.31
RFX1-205ENST00000589239 NAPBQ9H115 298 aa29.5■■■□□ 2.31
RFX1-205ENST00000589239 SHTN1A0MZ66 631 aa29.5■■■□□ 2.31
RFX1-205ENST00000589239 PLCG2P16885 1265 aa29.5■■■□□ 2.31
RFX1-205ENST00000589239 RPS12P25398 132 aaKnown RBP29.5■■■□□ 2.31
RFX1-205ENST00000589239 TDO2P48775 406 aa29.5■■■□□ 2.31
RFX1-205ENST00000589239 CTNNA3Q9UI47 895 aa29.5■■■□□ 2.31
RFX1-205ENST00000589239 SNX14Q9Y5W7 946 aa29.5■■■□□ 2.31
RFX1-205ENST00000589239 ALX1Q15699 326 aa29.49■■■□□ 2.31
RFX1-205ENST00000589239 RNF20Q5VTR2 975 aa29.49■■■□□ 2.31
RFX1-205ENST00000589239 TEX11Q8IYF3 940 aa29.49■■■□□ 2.31
RFX1-205ENST00000589239 TGFBRAP1Q8WUH2 860 aa29.49■■■□□ 2.31
RFX1-205ENST00000589239 RPAP1Q9BWH6 1393 aaPredicted RBP29.49■■■□□ 2.31
RFX1-205ENST00000589239 KCNB2Q92953 911 aa29.48■■■□□ 2.31
RFX1-205ENST00000589239 DCP1AQ9NPI6 582 aaPredicted RBP29.48■■■□□ 2.31
RFX1-205ENST00000589239 USP40Q9NVE5 1235 aa29.48■■■□□ 2.31
RFX1-205ENST00000589239 USP5P45974 858 aa29.48■■■□□ 2.31
RFX1-205ENST00000589239 HAND2P61296 217 aa29.48■■■□□ 2.31
RFX1-205ENST00000589239 CDC42EP5Q6NZY7 148 aa29.48■■■□□ 2.31
RFX1-205ENST00000589239 TIAM2Q8IVF5 1701 aa29.47■■■□□ 2.31
RFX1-205ENST00000589239 ZKSCAN1P17029 563 aaPredicted RBP29.47■■■□□ 2.31
RFX1-205ENST00000589239 ANAPC15P60006 121 aa29.47■■■□□ 2.31
RFX1-205ENST00000589239 GPC2Q8N158 579 aa29.47■■■□□ 2.31
RFX1-205ENST00000589239 PRMT6Q96LA8 375 aaPredicted RBP29.47■■■□□ 2.31
RFX1-205ENST00000589239 ATP8A2Q9NTI2 1148 aa29.47■■■□□ 2.31
RFX1-205ENST00000589239 ZMYM6O95789 1325 aa29.47■■■□□ 2.31
RFX1-205ENST00000589239 IL27Q8NEV9 243 aa29.47■■■□□ 2.31
RFX1-205ENST00000589239 IMMTQ16891 758 aaKnown RBP29.46■■■□□ 2.31
RFX1-205ENST00000589239 DPF2Q92785 391 aa29.46■■■□□ 2.31
RFX1-205ENST00000589239 GIMAP6Q6P9H5 292 aa29.45■■■□□ 2.31
RFX1-205ENST00000589239 MAPKAPK5Q8IW41 473 aa29.45■■■□□ 2.31
RFX1-205ENST00000589239 MKRN1Q9UHC7 482 aaKnown RBP29.45■■■□□ 2.31
RFX1-205ENST00000589239 DLGAP5Q15398 846 aa29.45■■■□□ 2.3
RFX1-205ENST00000589239 MICALL2Q8IY33 904 aa29.45■■■□□ 2.3
RFX1-205ENST00000589239 SPDYE2BA6NHP3 402 aa29.44■■■□□ 2.3
RFX1-205ENST00000589239 ZNF213O14771 459 aa29.44■■■□□ 2.3
RFX1-205ENST00000589239 WDHD1O75717 1129 aaPredicted RBP29.44■■■□□ 2.3
RFX1-205ENST00000589239 SPDYE6P0CI01 402 aa29.44■■■□□ 2.3
RFX1-205ENST00000589239 ADCK5Q3MIX3 580 aa29.44■■■□□ 2.3
RFX1-205ENST00000589239 DDNO94850 711 aaPredicted RBP29.44■■■□□ 2.3
RFX1-205ENST00000589239 DDRGK1Q96HY6 314 aa29.44■■■□□ 2.3
RFX1-205ENST00000589239 TDRD3Q9H7E2 651 aaKnown RBP29.44■■■□□ 2.3
RFX1-205ENST00000589239 MYOZ2Q9NPC6 264 aa29.44■■■□□ 2.3
RFX1-205ENST00000589239 CNOT7Q9UIV1 285 aaKnown RBP29.44■■■□□ 2.3
RFX1-205ENST00000589239 CACNB3P54284 484 aa29.43■■■□□ 2.3
RFX1-205ENST00000589239 ZNF280AP59817 542 aaPredicted RBP29.43■■■□□ 2.3
RFX1-205ENST00000589239 MCM9Q9NXL9 1143 aa29.43■■■□□ 2.3
RFX1-205ENST00000589239 FLT1P17948 1338 aa29.43■■■□□ 2.3
RFX1-205ENST00000589239 PICALMQ13492 652 aa29.42■■■□□ 2.3
RFX1-205ENST00000589239 CTR9Q6PD62 1173 aa29.42■■■□□ 2.3
RFX1-205ENST00000589239 IL17RAQ96F46 866 aa29.42■■■□□ 2.3
RFX1-205ENST00000589239 BAZ2AQ9UIF9 1905 aaKnown RBP29.42■■■□□ 2.3
RFX1-205ENST00000589239 USP17L12C9JPN9 530 aa29.42■■■□□ 2.3
RFX1-205ENST00000589239 USP17L21D6R901 530 aa29.42■■■□□ 2.3
RFX1-205ENST00000589239 EGFRP00533 1210 aa29.42■■■□□ 2.3
RFX1-205ENST00000589239 TSGA10IPQ3SY00 556 aa29.42■■■□□ 2.3
RFX1-205ENST00000589239 NBPF3Q9H094 633 aa29.42■■■□□ 2.3
RFX1-205ENST00000589239 CYP2D7A0A087X1C5 515 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms