RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 FKBP1CQ5VVH2 108 aa13.83□□□□□ -0.2
MRPL54-202ENST00000589174 CDC42EP5Q6NZY7 148 aa13.83□□□□□ -0.2
MRPL54-202ENST00000589174 HHIPL2Q6UWX4 724 aa13.83□□□□□ -0.2
MRPL54-202ENST00000589174 VPS37DQ86XT2 251 aa13.83□□□□□ -0.2
MRPL54-202ENST00000589174 TBC1D22AQ8WUA7 517 aa13.83□□□□□ -0.2
MRPL54-202ENST00000589174 ZNF333Q96JL9 665 aa13.83□□□□□ -0.2
MRPL54-202ENST00000589174 TNNQ9UQP3 1299 aa13.83□□□□□ -0.2
MRPL54-202ENST00000589174 GTF2A2P52657 109 aa13.82□□□□□ -0.2
MRPL54-202ENST00000589174 ZNF384Q8TF68 577 aa13.82□□□□□ -0.2
MRPL54-202ENST00000589174 SIL1Q9H173 461 aa13.82□□□□□ -0.2
MRPL54-202ENST00000589174 ZNF112Q9UJU3 913 aa13.82□□□□□ -0.2
MRPL54-202ENST00000589174 TNNI2P48788 182 aa13.81□□□□□ -0.2
MRPL54-202ENST00000589174 ALDH1L2Q3SY69 923 aa13.81□□□□□ -0.2
MRPL54-202ENST00000589174 SH3BP5LQ7L8J4 393 aa13.81□□□□□ -0.2
MRPL54-202ENST00000589174 ERO1BQ86YB8 467 aa13.81□□□□□ -0.2
MRPL54-202ENST00000589174 LPIN2Q92539 896 aa13.81□□□□□ -0.2
MRPL54-202ENST00000589174 MEIS3Q99687 375 aa13.81□□□□□ -0.2
MRPL54-202ENST00000589174 SUGT1Q9Y2Z0 365 aa13.81□□□□□ -0.2
MRPL54-202ENST00000589174 SIPA1L1O43166 1804 aa13.8□□□□□ -0.2
MRPL54-202ENST00000589174 TLR2O60603 784 aa13.8□□□□□ -0.2
MRPL54-202ENST00000589174 FRAT2O75474 233 aaPredicted RBP13.8□□□□□ -0.2
MRPL54-202ENST00000589174 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
MRPL54-202ENST00000589174 IFIT1P09914 478 aaKnown RBP13.8□□□□□ -0.2
MRPL54-202ENST00000589174 TCP10Q12799 353 aa13.8□□□□□ -0.2
MRPL54-202ENST00000589174 PPIL2Q13356 520 aa13.8□□□□□ -0.2
MRPL54-202ENST00000589174 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
MRPL54-202ENST00000589174 C17orf99Q6UX52 265 aa13.8□□□□□ -0.2
MRPL54-202ENST00000589174 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.8□□□□□ -0.2
MRPL54-202ENST00000589174 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
MRPL54-202ENST00000589174 NOB1Q9ULX3 412 aaKnown RBP13.8□□□□□ -0.2
MRPL54-202ENST00000589174 CSADQ9Y600 493 aa13.8□□□□□ -0.2
MRPL54-202ENST00000589174 LRRFIP2Q9Y608 721 aaKnown RBP13.8□□□□□ -0.2
MRPL54-202ENST00000589174 DOCK1Q14185 1865 aa13.8□□□□□ -0.2
MRPL54-202ENST00000589174 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
MRPL54-202ENST00000589174 DOCK3Q8IZD9 2030 aa13.8□□□□□ -0.2
MRPL54-202ENST00000589174 PHF20L1A8MW92 1017 aa13.79□□□□□ -0.2
MRPL54-202ENST00000589174 SLC5A1P13866 664 aa13.79□□□□□ -0.2
MRPL54-202ENST00000589174 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
MRPL54-202ENST00000589174 LACTBP83111 547 aaPredicted RBP13.79□□□□□ -0.2
MRPL54-202ENST00000589174 ATP2B3Q16720 1220 aa13.79□□□□□ -0.2
MRPL54-202ENST00000589174 INTS3Q68E01 1043 aaKnown RBP13.79□□□□□ -0.2
MRPL54-202ENST00000589174 SH3TC2Q8TF17 1288 aa13.79□□□□□ -0.2
MRPL54-202ENST00000589174 FAM151AQ8WW52 585 aa13.79□□□□□ -0.2
MRPL54-202ENST00000589174 ZFYVE28Q9HCC9 887 aa13.79□□□□□ -0.2
MRPL54-202ENST00000589174 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.79□□□□□ -0.2
MRPL54-202ENST00000589174 KCNH4Q9UQ05 1017 aa13.79□□□□□ -0.2
MRPL54-202ENST00000589174 CIAO1O76071 339 aa13.78□□□□□ -0.2
MRPL54-202ENST00000589174 MYCP01106 439 aaPredicted RBP13.78□□□□□ -0.2
MRPL54-202ENST00000589174 GPAT2Q6NUI2 795 aa13.78□□□□□ -0.2
MRPL54-202ENST00000589174 WDR66Q8TBY9 1149 aa13.78□□□□□ -0.2
MRPL54-202ENST00000589174 SHISA4Q96DD7 197 aa13.78□□□□□ -0.2
MRPL54-202ENST00000589174 ZNF341Q9BYN7 854 aa13.78□□□□□ -0.2
MRPL54-202ENST00000589174 DDX4Q9NQI0 724 aaKnown RBP13.78□□□□□ -0.2
MRPL54-202ENST00000589174 CPA4Q9UI42 421 aa13.78□□□□□ -0.2
MRPL54-202ENST00000589174 GAKO14976 1311 aa13.78□□□□□ -0.2
MRPL54-202ENST00000589174 MAST3O60307 1309 aa13.78□□□□□ -0.2
MRPL54-202ENST00000589174 SALL1Q9NSC2 1324 aa13.78□□□□□ -0.2
MRPL54-202ENST00000589174 CDK5RAP2Q96SN8 1893 aa13.78□□□□□ -0.2
MRPL54-202ENST00000589174 CETPP11597 493 aa13.77□□□□□ -0.21
MRPL54-202ENST00000589174 TIMM10P62072 90 aa13.77□□□□□ -0.21
MRPL54-202ENST00000589174 PPATQ06203 517 aa13.77□□□□□ -0.21
MRPL54-202ENST00000589174 RASGRF1Q13972 1273 aa13.77□□□□□ -0.21
MRPL54-202ENST00000589174 MTFR1Q15390 333 aa13.77□□□□□ -0.21
MRPL54-202ENST00000589174 NOL9Q5SY16 702 aaKnown RBP13.77□□□□□ -0.21
MRPL54-202ENST00000589174 CCDC102BQ68D86 513 aa13.77□□□□□ -0.21
MRPL54-202ENST00000589174 TRIM47Q96LD4 638 aa13.77□□□□□ -0.21
MRPL54-202ENST00000589174 ATAD5Q96QE3 1844 aa13.77□□□□□ -0.21
MRPL54-202ENST00000589174 COPRSQ9NQ92 184 aa13.77□□□□□ -0.21
MRPL54-202ENST00000589174 DDTLA6NHG4 134 aaPredicted RBP13.76□□□□□ -0.21
MRPL54-202ENST00000589174 ZBTB22O15209 634 aa13.76□□□□□ -0.21
MRPL54-202ENST00000589174 WDHD1O75717 1129 aaPredicted RBP13.76□□□□□ -0.21
MRPL54-202ENST00000589174 UBTFL1P0CB47 393 aaPredicted RBP13.76□□□□□ -0.21
MRPL54-202ENST00000589174 RARSP54136 660 aaKnown RBP13.76□□□□□ -0.21
MRPL54-202ENST00000589174 SNAPC2Q13487 334 aa13.76□□□□□ -0.21
MRPL54-202ENST00000589174 HABP4Q5JVS0 413 aaKnown RBP13.76□□□□□ -0.21
MRPL54-202ENST00000589174 CCDC84Q86UT8 332 aaPredicted RBP13.76□□□□□ -0.21
MRPL54-202ENST00000589174 ZCCHC17Q9NP64 241 aaKnown RBP13.76□□□□□ -0.21
MRPL54-202ENST00000589174 TMOD2Q9NZR1 351 aa13.76□□□□□ -0.21
MRPL54-202ENST00000589174 RGS3P49796 1198 aa13.75□□□□□ -0.21
MRPL54-202ENST00000589174 MAP3K10Q02779 954 aa13.75□□□□□ -0.21
MRPL54-202ENST00000589174 SLC9C1Q4G0N8 1177 aa13.75□□□□□ -0.21
MRPL54-202ENST00000589174 PI16Q6UXB8 463 aa13.75□□□□□ -0.21
MRPL54-202ENST00000589174 ANKRD23Q86SG2 305 aa13.75□□□□□ -0.21
MRPL54-202ENST00000589174 USP40Q9NVE5 1235 aa13.75□□□□□ -0.21
MRPL54-202ENST00000589174 CEP126Q9P2H0 1117 aa13.75□□□□□ -0.21
MRPL54-202ENST00000589174 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
MRPL54-202ENST00000589174 LOC285556D6RIA3 1793 aa13.74□□□□□ -0.21
MRPL54-202ENST00000589174 PDHXO00330 501 aa13.74□□□□□ -0.21
MRPL54-202ENST00000589174 LDHBP07195 334 aaKnown RBP13.74□□□□□ -0.21
MRPL54-202ENST00000589174 CYP2C8P10632 490 aa13.74□□□□□ -0.21
MRPL54-202ENST00000589174 BCRP11274 1271 aa13.74□□□□□ -0.21
MRPL54-202ENST00000589174 OSBPP22059 807 aa13.74□□□□□ -0.21
MRPL54-202ENST00000589174 RHBDL3P58872 404 aa13.74□□□□□ -0.21
MRPL54-202ENST00000589174 RRP1BQ14684 758 aaKnown RBP13.74□□□□□ -0.21
MRPL54-202ENST00000589174 DCAF15Q66K64 600 aa13.74□□□□□ -0.21
MRPL54-202ENST00000589174 IDI2Q9BXS1 227 aa13.74□□□□□ -0.21
MRPL54-202ENST00000589174 PCDH10Q9P2E7 1040 aa13.74□□□□□ -0.21
MRPL54-202ENST00000589174 ALPK3Q96L96 1907 aa13.74□□□□□ -0.21
MRPL54-202ENST00000589174 IL15P40933 162 aaPredicted RBP13.73□□□□□ -0.21
MRPL54-202ENST00000589174 TFCP2Q12800 502 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms