RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 MROH7-TTC4A0A0A0MT08 1334 aa26.52■■□□□ 1.84
ATG4D-209ENST00000588857 BAG3O95817 575 aa26.51■■□□□ 1.83
ATG4D-209ENST00000588857 ALX1Q15699 326 aa26.51■■□□□ 1.83
ATG4D-209ENST00000588857 HSCBQ8IWL3 235 aa26.51■■□□□ 1.83
ATG4D-209ENST00000588857 SNX21Q969T3 373 aa26.51■■□□□ 1.83
ATG4D-209ENST00000588857 JAKMIP1Q96N16 626 aaKnown RBP26.51■■□□□ 1.83
ATG4D-209ENST00000588857 GSG1L2A8MUP6 293 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 PRKAB2O43741 272 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 PSMA5P28066 241 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 DACT2Q5SW24 774 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 NIM1KQ8IY84 436 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 IFNL3Q8IZI9 196 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 MXD3Q9BW11 206 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 CRNKL1Q9BZJ0 848 aaKnown RBP26.5■■□□□ 1.83
ATG4D-209ENST00000588857 TM6SF1Q9BZW5 370 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 NAPBQ9H115 298 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 TTF2Q9UNY4 1162 aaKnown RBP26.5■■□□□ 1.83
ATG4D-209ENST00000588857 LAMA4Q16363 1823 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 CERS3Q8IU89 383 aa26.5■■□□□ 1.83
ATG4D-209ENST00000588857 FAM163AQ96GL9 167 aaPredicted RBP26.5■■□□□ 1.83
ATG4D-209ENST00000588857 ZMYM6O95789 1325 aa26.49■■□□□ 1.83
ATG4D-209ENST00000588857 ZC3H4Q9UPT8 1303 aaKnown RBP26.49■■□□□ 1.83
ATG4D-209ENST00000588857 YDJCA8MPS7 323 aa26.49■■□□□ 1.83
ATG4D-209ENST00000588857 F8W031 263 aaPredicted RBP26.49■■□□□ 1.83
ATG4D-209ENST00000588857 ZNF213O14771 459 aa26.49■■□□□ 1.83
ATG4D-209ENST00000588857 CASTP20810 708 aaKnown RBP26.49■■□□□ 1.83
ATG4D-209ENST00000588857 ADCK5Q3MIX3 580 aa26.49■■□□□ 1.83
ATG4D-209ENST00000588857 TBC1D2Q9BYX2 928 aa26.49■■□□□ 1.83
ATG4D-209ENST00000588857 UPF3BQ9BZI7 483 aaKnown RBP26.49■■□□□ 1.83
ATG4D-209ENST00000588857 TDO2P48775 406 aa26.48■■□□□ 1.83
ATG4D-209ENST00000588857 ZNRF3Q9ULT6 936 aa26.48■■□□□ 1.83
ATG4D-209ENST00000588857 TAF6LQ9Y6J9 622 aa26.48■■□□□ 1.83
ATG4D-209ENST00000588857 PPP4CP60510 307 aa26.47■■□□□ 1.83
ATG4D-209ENST00000588857 JDP2Q8WYK2 163 aa26.47■■□□□ 1.83
ATG4D-209ENST00000588857 EPB41L4AQ9HCS5 686 aaPredicted RBP26.47■■□□□ 1.83
ATG4D-209ENST00000588857 CYP46A1Q9Y6A2 500 aa26.47■■□□□ 1.83
ATG4D-209ENST00000588857 BAZ2AQ9UIF9 1905 aaKnown RBP26.47■■□□□ 1.83
ATG4D-209ENST00000588857 COL4A5P29400 1685 aa26.47■■□□□ 1.83
ATG4D-209ENST00000588857 GPR75-ASB3A0A0A6YYF3 556 aa26.46■■□□□ 1.83
ATG4D-209ENST00000588857 HAND2P61296 217 aa26.46■■□□□ 1.83
ATG4D-209ENST00000588857 SDR42E1Q8WUS8 393 aa26.46■■□□□ 1.83
ATG4D-209ENST00000588857 ZSWIM6Q9HCJ5 1215 aa26.46■■□□□ 1.83
ATG4D-209ENST00000588857 PLCG2P16885 1265 aa26.46■■□□□ 1.83
ATG4D-209ENST00000588857 BTDP43251 543 aa26.46■■□□□ 1.83
ATG4D-209ENST00000588857 GAKO14976 1311 aa26.45■■□□□ 1.83
ATG4D-209ENST00000588857 GIMAP6Q6P9H5 292 aa26.45■■□□□ 1.82
ATG4D-209ENST00000588857 BLOC1S2Q6QNY1 142 aa26.45■■□□□ 1.82
ATG4D-209ENST00000588857 NEK1Q96PY6 1258 aa26.45■■□□□ 1.82
ATG4D-209ENST00000588857 SBF1O95248 1867 aa26.44■■□□□ 1.82
ATG4D-209ENST00000588857 CDK5RAP2Q96SN8 1893 aa26.44■■□□□ 1.82
ATG4D-209ENST00000588857 RAD17O75943 681 aa26.44■■□□□ 1.82
ATG4D-209ENST00000588857 SLC4A3P48751 1232 aa26.44■■□□□ 1.82
ATG4D-209ENST00000588857 RUFY3Q7L099 469 aa26.44■■□□□ 1.82
ATG4D-209ENST00000588857 KIAA0825Q8IV33 1275 aa26.44■■□□□ 1.82
ATG4D-209ENST00000588857 TEKT1Q969V4 418 aa26.44■■□□□ 1.82
ATG4D-209ENST00000588857 ATP8A2Q9NTI2 1148 aa26.44■■□□□ 1.82
ATG4D-209ENST00000588857 MYO3BQ8WXR4 1341 aa26.44■■□□□ 1.82
ATG4D-209ENST00000588857 E7EWF7 191 aa26.43■■□□□ 1.82
ATG4D-209ENST00000588857 CD2BP2O95400 341 aaKnown RBP26.43■■□□□ 1.82
ATG4D-209ENST00000588857 MCM2P49736 904 aa26.43■■□□□ 1.82
ATG4D-209ENST00000588857 SCNN1DP51172 638 aa26.43■■□□□ 1.82
ATG4D-209ENST00000588857 HHIPL2Q6UWX4 724 aa26.43■■□□□ 1.82
ATG4D-209ENST00000588857 SH3RF3Q8TEJ3 882 aaPredicted RBP26.43■■□□□ 1.82
ATG4D-209ENST00000588857 DAGLAQ9Y4D2 1042 aa26.43■■□□□ 1.82
ATG4D-209ENST00000588857 KIF3CO14782 793 aa26.42■■□□□ 1.82
ATG4D-209ENST00000588857 HMGB1P09429 215 aaKnown RBP26.42■■□□□ 1.82
ATG4D-209ENST00000588857 C1QTNF8P60827 252 aa26.42■■□□□ 1.82
ATG4D-209ENST00000588857 MRIQ9BWK5 157 aa26.42■■□□□ 1.82
ATG4D-209ENST00000588857 CPA1P15085 419 aa26.41■■□□□ 1.82
ATG4D-209ENST00000588857 USP5P45974 858 aa26.41■■□□□ 1.82
ATG4D-209ENST00000588857 RSBN1LQ6PCB5 846 aaPredicted RBP26.41■■□□□ 1.82
ATG4D-209ENST00000588857 STOX1Q6ZVD7 989 aa26.41■■□□□ 1.82
ATG4D-209ENST00000588857 PDRG1Q9NUG6 133 aa26.41■■□□□ 1.82
ATG4D-209ENST00000588857 GLTPD2A6NH11 291 aa26.41■■□□□ 1.82
ATG4D-209ENST00000588857 K7ELQ4 463 aaPredicted RBP26.41■■□□□ 1.82
ATG4D-209ENST00000588857 PSMD14O00487 310 aa26.41■■□□□ 1.82
ATG4D-209ENST00000588857 VIL1P09327 827 aaKnown RBP26.41■■□□□ 1.82
ATG4D-209ENST00000588857 HDLBPQ00341 1268 aaKnown RBP26.41■■□□□ 1.82
ATG4D-209ENST00000588857 NMRK2Q9NPI5 230 aa26.41■■□□□ 1.82
ATG4D-209ENST00000588857 ADAMTSL1Q8N6G6 1762 aa26.41■■□□□ 1.82
ATG4D-209ENST00000588857 RPS6KB1P23443 525 aa26.4■■□□□ 1.82
ATG4D-209ENST00000588857 CRKP46108 304 aa26.4■■□□□ 1.82
ATG4D-209ENST00000588857 DCP1AQ9NPI6 582 aaPredicted RBP26.4■■□□□ 1.82
ATG4D-209ENST00000588857 NAV1Q8NEY1 1877 aa26.4■■□□□ 1.82
ATG4D-209ENST00000588857 DPY19L2Q6NUT2 758 aa26.39■■□□□ 1.82
ATG4D-209ENST00000588857 TEX11Q8IYF3 940 aa26.39■■□□□ 1.82
ATG4D-209ENST00000588857 TTC14Q96N46 770 aa26.39■■□□□ 1.82
ATG4D-209ENST00000588857 FOCADQ5VW36 1801 aa26.39■■□□□ 1.81
ATG4D-209ENST00000588857 LAMB1P07942 1786 aa26.39■■□□□ 1.81
ATG4D-209ENST00000588857 ECM29Q5VYK3 1845 aa26.38■■□□□ 1.81
ATG4D-209ENST00000588857 MINDY4BA8MYZ0 360 aa26.38■■□□□ 1.81
ATG4D-209ENST00000588857 TRDNQ13061 729 aa26.38■■□□□ 1.81
ATG4D-209ENST00000588857 NBPF3Q9H094 633 aa26.38■■□□□ 1.81
ATG4D-209ENST00000588857 SERPINA10Q9UK55 444 aa26.38■■□□□ 1.81
ATG4D-209ENST00000588857 TIAM2Q8IVF5 1701 aa26.38■■□□□ 1.81
ATG4D-209ENST00000588857 RBM5P52756 815 aaKnown RBP eCLIP26.37■■□□□ 1.81
ATG4D-209ENST00000588857 CXCL9Q07325 125 aa26.37■■□□□ 1.81
ATG4D-209ENST00000588857 PPARAQ07869 468 aa26.37■■□□□ 1.81
ATG4D-209ENST00000588857 TNIP1Q15025 636 aa26.37■■□□□ 1.81
ATG4D-209ENST00000588857 CIAPIN1Q6FI81 312 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms