RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 BTDP43251 543 aa27.1■■□□□ 1.93
ACTN4-210ENST00000588618 DPY19L2Q6NUT2 758 aa27.1■■□□□ 1.93
ACTN4-210ENST00000588618 DAGLAQ9Y4D2 1042 aa27.1■■□□□ 1.93
ACTN4-210ENST00000588618 PLCG2P16885 1265 aa27.09■■□□□ 1.93
ACTN4-210ENST00000588618 GNAT2P19087 354 aa27.09■■□□□ 1.93
ACTN4-210ENST00000588618 MMP14P50281 582 aa27.09■■□□□ 1.93
ACTN4-210ENST00000588618 PCDHAC2Q9Y5I4 1007 aa27.09■■□□□ 1.93
ACTN4-210ENST00000588618 HSPD1P10809 573 aaKnown RBP27.08■■□□□ 1.93
ACTN4-210ENST00000588618 GMPSP49915 693 aaPredicted RBP27.08■■□□□ 1.93
ACTN4-210ENST00000588618 DPF2Q92785 391 aa27.08■■□□□ 1.93
ACTN4-210ENST00000588618 GPR75-ASB3A0A0A6YYF3 556 aa27.07■■□□□ 1.92
ACTN4-210ENST00000588618 PRKAB2O43741 272 aa27.07■■□□□ 1.92
ACTN4-210ENST00000588618 APPP05067 770 aa27.07■■□□□ 1.92
ACTN4-210ENST00000588618 MAP4K1Q92918 833 aa27.07■■□□□ 1.92
ACTN4-210ENST00000588618 ZDHHC15Q96MV8 337 aa27.07■■□□□ 1.92
ACTN4-210ENST00000588618 BAZ2AQ9UIF9 1905 aaKnown RBP27.07■■□□□ 1.92
ACTN4-210ENST00000588618 CRNKL1Q9BZJ0 848 aaKnown RBP27.07■■□□□ 1.92
ACTN4-210ENST00000588618 SLC4A4Q9Y6R1 1079 aa27.07■■□□□ 1.92
ACTN4-210ENST00000588618 ECM29Q5VYK3 1845 aa27.06■■□□□ 1.92
ACTN4-210ENST00000588618 CFAP100Q494V2 611 aa27.06■■□□□ 1.92
ACTN4-210ENST00000588618 TBC1D32Q96NH3 1257 aa27.06■■□□□ 1.92
ACTN4-210ENST00000588618 FOCADQ5VW36 1801 aa27.05■■□□□ 1.92
ACTN4-210ENST00000588618 PPP4CP60510 307 aa27.05■■□□□ 1.92
ACTN4-210ENST00000588618 DLGAP5Q15398 846 aa27.05■■□□□ 1.92
ACTN4-210ENST00000588618 DDRGK1Q96HY6 314 aa27.05■■□□□ 1.92
ACTN4-210ENST00000588618 C22orf23Q9BZE7 217 aa27.05■■□□□ 1.92
ACTN4-210ENST00000588618 NACAP1Q9BZK3 213 aa27.05■■□□□ 1.92
ACTN4-210ENST00000588618 SHTN1A0MZ66 631 aa27.04■■□□□ 1.92
ACTN4-210ENST00000588618 EPB41L2O43491 1005 aaKnown RBP27.04■■□□□ 1.92
ACTN4-210ENST00000588618 MICALL2Q8IY33 904 aa27.04■■□□□ 1.92
ACTN4-210ENST00000588618 DSCC1Q9BVC3 393 aa27.04■■□□□ 1.92
ACTN4-210ENST00000588618 EPB41L4AQ9HCS5 686 aaPredicted RBP27.04■■□□□ 1.92
ACTN4-210ENST00000588618 CNOT7Q9UIV1 285 aaKnown RBP27.04■■□□□ 1.92
ACTN4-210ENST00000588618 RBM8AQ9Y5S9 174 aaKnown RBP27.04■■□□□ 1.92
ACTN4-210ENST00000588618 MCCP23508 829 aa27.04■■□□□ 1.92
ACTN4-210ENST00000588618 SH3RF3Q8TEJ3 882 aaPredicted RBP27.04■■□□□ 1.92
ACTN4-210ENST00000588618 GSG1L2A8MUP6 293 aa27.03■■□□□ 1.92
ACTN4-210ENST00000588618 H7C1D1 291 aa27.03■■□□□ 1.92
ACTN4-210ENST00000588618 DDNO94850 711 aaPredicted RBP27.03■■□□□ 1.92
ACTN4-210ENST00000588618 LMOD1P29536 600 aaPredicted RBP27.03■■□□□ 1.92
ACTN4-210ENST00000588618 RHBDL3P58872 404 aa27.03■■□□□ 1.92
ACTN4-210ENST00000588618 APOBEC3HQ6NTF7 200 aaKnown RBP27.03■■□□□ 1.92
ACTN4-210ENST00000588618 SDR42E1Q8WUS8 393 aa27.03■■□□□ 1.92
ACTN4-210ENST00000588618 PALD1Q9ULE6 856 aa27.03■■□□□ 1.92
ACTN4-210ENST00000588618 PATL2C9JE40 543 aaKnown RBP27.02■■□□□ 1.92
ACTN4-210ENST00000588618 USP5P45974 858 aa27.02■■□□□ 1.92
ACTN4-210ENST00000588618 TEX11Q8IYF3 940 aa27.02■■□□□ 1.92
ACTN4-210ENST00000588618 MYOZ2Q9NPC6 264 aa27.02■■□□□ 1.92
ACTN4-210ENST00000588618 RPAP1Q9BWH6 1393 aaPredicted RBP27.02■■□□□ 1.92
ACTN4-210ENST00000588618 RBM25P49756 843 aaKnown RBP27.02■■□□□ 1.92
ACTN4-210ENST00000588618 NECTIN1Q15223 517 aa27.02■■□□□ 1.92
ACTN4-210ENST00000588618 USP40Q9NVE5 1235 aa27.02■■□□□ 1.92
ACTN4-210ENST00000588618 LAMA4Q16363 1823 aa27.01■■□□□ 1.91
ACTN4-210ENST00000588618 MYO1BO43795 1136 aa27.01■■□□□ 1.91
ACTN4-210ENST00000588618 HSPA4P34932 840 aa27.01■■□□□ 1.91
ACTN4-210ENST00000588618 ZNF280AP59817 542 aaPredicted RBP27.01■■□□□ 1.91
ACTN4-210ENST00000588618 U3KPZ7 1027 aaPredicted RBP27.01■■□□□ 1.91
ACTN4-210ENST00000588618 NAV1Q8NEY1 1877 aa27.01■■□□□ 1.91
ACTN4-210ENST00000588618 FGAP02671 866 aa27■■□□□ 1.91
ACTN4-210ENST00000588618 TDO2P48775 406 aa27■■□□□ 1.91
ACTN4-210ENST00000588618 NAPBQ9H115 298 aa27■■□□□ 1.91
ACTN4-210ENST00000588618 GPRC5DQ9NZD1 345 aa27■■□□□ 1.91
ACTN4-210ENST00000588618 CTNNA3Q9UI47 895 aa27■■□□□ 1.91
ACTN4-210ENST00000588618 TAF6LQ9Y6J9 622 aa27■■□□□ 1.91
ACTN4-210ENST00000588618 DDX60LQ5H9U9 1706 aaKnown RBP26.99■■□□□ 1.91
ACTN4-210ENST00000588618 SPDYE2BA6NHP3 402 aa26.99■■□□□ 1.91
ACTN4-210ENST00000588618 SPDYE6P0CI01 402 aa26.99■■□□□ 1.91
ACTN4-210ENST00000588618 ATP8A2Q9NTI2 1148 aa26.99■■□□□ 1.91
ACTN4-210ENST00000588618 TMOD2Q9NZR1 351 aa26.99■■□□□ 1.91
ACTN4-210ENST00000588618 RBM26Q5T8P6 1007 aaKnown RBP26.99■■□□□ 1.91
ACTN4-210ENST00000588618 CDC42EP5Q6NZY7 148 aa26.99■■□□□ 1.91
ACTN4-210ENST00000588618 RASEFQ8IZ41 740 aa26.99■■□□□ 1.91
ACTN4-210ENST00000588618 MTMR14Q8NCE2 650 aa26.99■■□□□ 1.91
ACTN4-210ENST00000588618 KIF2CQ99661 725 aa26.99■■□□□ 1.91
ACTN4-210ENST00000588618 GLTPD2A6NH11 291 aa26.98■■□□□ 1.91
ACTN4-210ENST00000588618 RNF20Q5VTR2 975 aa26.98■■□□□ 1.91
ACTN4-210ENST00000588618 IFNL3Q8IZI9 196 aa26.98■■□□□ 1.91
ACTN4-210ENST00000588618 TGFBRAP1Q8WUH2 860 aa26.98■■□□□ 1.91
ACTN4-210ENST00000588618 PRMT6Q96LA8 375 aaPredicted RBP26.98■■□□□ 1.91
ACTN4-210ENST00000588618 CREB3L3Q68CJ9 461 aa26.97■■□□□ 1.91
ACTN4-210ENST00000588618 SLC27A2O14975 620 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 EGFRP00533 1210 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 ALX1Q15699 326 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 GIMAP6Q6P9H5 292 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 AMOTL1Q8IY63 956 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 TDRD3Q9H7E2 651 aaKnown RBP26.96■■□□□ 1.91
ACTN4-210ENST00000588618 MKRN1Q9UHC7 482 aaKnown RBP26.96■■□□□ 1.91
ACTN4-210ENST00000588618 MYH1P12882 1939 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 CYP21A2P08686 494 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 KIF4BQ2VIQ3 1234 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 TBC1D10BQ4KMP7 808 aaPredicted RBP26.96■■□□□ 1.91
ACTN4-210ENST00000588618 SAMD7Q7Z3H4 446 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 KCNB2Q92953 911 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 DCP1AQ9NPI6 582 aaPredicted RBP26.96■■□□□ 1.91
ACTN4-210ENST00000588618 LAMB1P07942 1786 aa26.96■■□□□ 1.91
ACTN4-210ENST00000588618 WNT10BO00744 389 aa26.95■■□□□ 1.9
ACTN4-210ENST00000588618 PICALMQ13492 652 aa26.95■■□□□ 1.9
ACTN4-210ENST00000588618 IMMTQ16891 758 aaKnown RBP26.95■■□□□ 1.9
ACTN4-210ENST00000588618 MAPKAPK5Q8IW41 473 aa26.95■■□□□ 1.9
ACTN4-210ENST00000588618 ZBED3Q96IU2 234 aaPredicted RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms