RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 HDAC9Q9UKV0 1011 aa19.34■□□□□ 0.69
NLE1-204ENST00000588019 ZKSCAN1P17029 563 aaPredicted RBP19.33■□□□□ 0.68
NLE1-204ENST00000588019 RPS12P25398 132 aaKnown RBP19.33■□□□□ 0.68
NLE1-204ENST00000588019 BTDP43251 543 aa19.33■□□□□ 0.68
NLE1-204ENST00000588019 GMLQ99445 158 aa19.33■□□□□ 0.68
NLE1-204ENST00000588019 DAGLAQ9Y4D2 1042 aa19.33■□□□□ 0.68
NLE1-204ENST00000588019 PSME4Q14997 1843 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 ZMYM6O95789 1325 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 GSG1L2A8MUP6 293 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 CRKP46108 304 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 SCNN1DP51172 638 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 CREB3L3Q68CJ9 461 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 GIMAP6Q6P9H5 292 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 OGFOD1Q8N543 542 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 KCNB2Q92953 911 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 DDRGK1Q96HY6 314 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 ZDHHC15Q96MV8 337 aa19.32■□□□□ 0.68
NLE1-204ENST00000588019 ZNF646O15015 1829 aaPredicted RBP19.31■□□□□ 0.68
NLE1-204ENST00000588019 SLC27A2O14975 620 aa19.31■□□□□ 0.68
NLE1-204ENST00000588019 FOXP2O15409 715 aa19.31■□□□□ 0.68
NLE1-204ENST00000588019 FGAP02671 866 aa19.31■□□□□ 0.68
NLE1-204ENST00000588019 IFNL3Q8IZI9 196 aa19.31■□□□□ 0.68
NLE1-204ENST00000588019 IL17RAQ96F46 866 aa19.31■□□□□ 0.68
NLE1-204ENST00000588019 NAPBQ9H115 298 aa19.31■□□□□ 0.68
NLE1-204ENST00000588019 ATP8A2Q9NTI2 1148 aa19.31■□□□□ 0.68
NLE1-204ENST00000588019 PRKAB2O43741 272 aa19.3■□□□□ 0.68
NLE1-204ENST00000588019 USP17L8P0C7I0 530 aa19.3■□□□□ 0.68
NLE1-204ENST00000588019 IMMTQ16891 758 aaKnown RBP19.3■□□□□ 0.68
NLE1-204ENST00000588019 RNF181Q9P0P0 153 aa19.3■□□□□ 0.68
NLE1-204ENST00000588019 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
NLE1-204ENST00000588019 TDO2P48775 406 aa19.29■□□□□ 0.68
NLE1-204ENST00000588019 RBM5P52756 815 aaKnown RBP eCLIP19.29■□□□□ 0.68
NLE1-204ENST00000588019 KRT32Q14532 448 aa19.29■□□□□ 0.68
NLE1-204ENST00000588019 TSGA10IPQ3SY00 556 aa19.29■□□□□ 0.68
NLE1-204ENST00000588019 IL27Q8NEV9 243 aa19.29■□□□□ 0.68
NLE1-204ENST00000588019 SH3RF3Q8TEJ3 882 aaPredicted RBP19.29■□□□□ 0.68
NLE1-204ENST00000588019 DPF2Q92785 391 aa19.29■□□□□ 0.68
NLE1-204ENST00000588019 PALD1Q9ULE6 856 aa19.29■□□□□ 0.68
NLE1-204ENST00000588019 SNX14Q9Y5W7 946 aa19.29■□□□□ 0.68
NLE1-204ENST00000588019 ZNF213O14771 459 aa19.28■□□□□ 0.68
NLE1-204ENST00000588019 ANP32AP39687 249 aaKnown RBP19.28■□□□□ 0.68
NLE1-204ENST00000588019 USP5P45974 858 aa19.28■□□□□ 0.68
NLE1-204ENST00000588019 RHBDL3P58872 404 aa19.28■□□□□ 0.68
NLE1-204ENST00000588019 APOBEC3HQ6NTF7 200 aaKnown RBP19.28■□□□□ 0.68
NLE1-204ENST00000588019 TEX11Q8IYF3 940 aa19.28■□□□□ 0.68
NLE1-204ENST00000588019 SDR42E1Q8WUS8 393 aa19.28■□□□□ 0.68
NLE1-204ENST00000588019 EPB41L4AQ9HCS5 686 aaPredicted RBP19.28■□□□□ 0.68
NLE1-204ENST00000588019 MYH2Q9UKX2 1941 aa19.27■□□□□ 0.68
NLE1-204ENST00000588019 CYP21A2P08686 494 aa19.27■□□□□ 0.68
NLE1-204ENST00000588019 RABEP1Q15276 862 aa19.27■□□□□ 0.68
NLE1-204ENST00000588019 CFAP100Q494V2 611 aa19.27■□□□□ 0.68
NLE1-204ENST00000588019 C9orf131Q5VYM1 1079 aa19.27■□□□□ 0.68
NLE1-204ENST00000588019 RASEFQ8IZ41 740 aa19.27■□□□□ 0.68
NLE1-204ENST00000588019 KIF2CQ99661 725 aa19.27■□□□□ 0.68
NLE1-204ENST00000588019 DCP1AQ9NPI6 582 aaPredicted RBP19.27■□□□□ 0.68
NLE1-204ENST00000588019 USP40Q9NVE5 1235 aa19.27■□□□□ 0.68
NLE1-204ENST00000588019 GJA3Q9Y6H8 435 aa19.27■□□□□ 0.68
NLE1-204ENST00000588019 ZNF541Q9H0D2 1346 aa19.26■□□□□ 0.67
NLE1-204ENST00000588019 PSMA5P28066 241 aa19.26■□□□□ 0.67
NLE1-204ENST00000588019 DLGAP5Q15398 846 aa19.26■□□□□ 0.67
NLE1-204ENST00000588019 GPC2Q8N158 579 aa19.26■□□□□ 0.67
NLE1-204ENST00000588019 MTMR14Q8NCE2 650 aa19.26■□□□□ 0.67
NLE1-204ENST00000588019 TM6SF1Q9BZW5 370 aa19.26■□□□□ 0.67
NLE1-204ENST00000588019 GMPSP49915 693 aaPredicted RBP19.25■□□□□ 0.67
NLE1-204ENST00000588019 ZNF280AP59817 542 aaPredicted RBP19.25■□□□□ 0.67
NLE1-204ENST00000588019 CDC42EP5Q6NZY7 148 aa19.25■□□□□ 0.67
NLE1-204ENST00000588019 AMOTL1Q8IY63 956 aa19.25■□□□□ 0.67
NLE1-204ENST00000588019 TGFBRAP1Q8WUH2 860 aa19.25■□□□□ 0.67
NLE1-204ENST00000588019 ARPP21Q9UBL0 812 aaPredicted RBP19.25■□□□□ 0.67
NLE1-204ENST00000588019 ZC3H4Q9UPT8 1303 aaKnown RBP19.25■□□□□ 0.67
NLE1-204ENST00000588019 DICER1Q9UPY3 1922 aaKnown RBP19.24■□□□□ 0.67
NLE1-204ENST00000588019 SBK1Q52WX2 424 aa19.24■□□□□ 0.67
NLE1-204ENST00000588019 MKRN1Q9UHC7 482 aaKnown RBP19.24■□□□□ 0.67
NLE1-204ENST00000588019 SBF1O95248 1867 aa19.23■□□□□ 0.67
NLE1-204ENST00000588019 SPDYE2BA6NHP3 402 aa19.23■□□□□ 0.67
NLE1-204ENST00000588019 SPDYE6P0CI01 402 aa19.23■□□□□ 0.67
NLE1-204ENST00000588019 CTR9Q6PD62 1173 aa19.23■□□□□ 0.67
NLE1-204ENST00000588019 JAKMIP1Q96N16 626 aaKnown RBP19.23■□□□□ 0.67
NLE1-204ENST00000588019 MCM9Q9NXL9 1143 aa19.23■□□□□ 0.67
NLE1-204ENST00000588019 CNOT7Q9UIV1 285 aaKnown RBP19.23■□□□□ 0.67
NLE1-204ENST00000588019 ANAPC4Q9UJX5 808 aa19.23■□□□□ 0.67
NLE1-204ENST00000588019 USP17L12C9JPN9 530 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 USP17L21D6R901 530 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 MYO1BO43795 1136 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 NPM3O75607 178 aaKnown RBP19.22■□□□□ 0.67
NLE1-204ENST00000588019 HMGB1P09429 215 aaKnown RBP19.22■□□□□ 0.67
NLE1-204ENST00000588019 HAND2P61296 217 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 PPARAQ07869 468 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 MAPKAPK5Q8IW41 473 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 MICALL2Q8IY33 904 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 PRMT6Q96LA8 375 aaPredicted RBP19.22■□□□□ 0.67
NLE1-204ENST00000588019 IDI2Q9BXS1 227 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 MYOZ2Q9NPC6 264 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 TMOD2Q9NZR1 351 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 FLT1P17948 1338 aa19.22■□□□□ 0.67
NLE1-204ENST00000588019 DCAF8L1A6NGE4 600 aa19.21■□□□□ 0.67
NLE1-204ENST00000588019 MINDY4BA8MYZ0 360 aa19.21■□□□□ 0.67
NLE1-204ENST00000588019 E7EWF7 191 aa19.21■□□□□ 0.67
NLE1-204ENST00000588019 H7C1D1 291 aa19.21■□□□□ 0.67
NLE1-204ENST00000588019 WDHD1O75717 1129 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms